Lonchura striata (white-rumped munia): 110478206
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Entry
110478206 CDS
T05897
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsr03041
]
110478206 (TFIP11)
Spliceosome [BR:
lsr03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
110478206 (TFIP11)
Other components
Complex C specific factors
110478206 (TFIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
110478206
NCBI-ProteinID:
XP_021400393
UniProt:
A0A218V5S1
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Position
15:9532690..9542028
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AA seq
827 aa
AA seq
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MSMSHLYGTDGDDGVEMESFEVSDWDLQNEFNPHRQRHRQTKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVSFVSAGLRKGAAEELSDEDSDEDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGSKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTPQSLQDFPVVDSEEETEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRISKQLAAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDS
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLSHEIQKMAEVLSHEEKAI
SNLSKVLDMVEECERRMQPGCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKEYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHSGQDLSTDAFHRLMWEIWMPYVR
NIVARWQPRNCGSMVDFLDSWVNVVPVWILDNILDQLIFPKLQKEVESWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGAAAGSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacctgtacggcacggacggagacgatggcgtggagatggagagcttc
gaggtgtcggactgggacctgcagaacgaattcaacccgcaccggcagcgacaccgccag
accaaggaggaggcgacctacggcgtgtgggccgagcgagactcggacgaggagcggccc
agcttcggcgggaagcgctccagggattactcagcccccgtgagctttgtgagcgctggg
ctgaggaagggggcggccgaggagctctcggatgaggactcggatgaggatgagaaacct
gtgaagcaggaggagattcccaaggagtttgtgcccaagaagttgaaaacaggtggaaat
ttcaagcccagccagaaaggcttcgtagggggctccaagtccttcgtggattttggcagc
tgggagagacacactaaaggaattgggcagaagctcctccagaagatgggatatgtccct
ggcaggggtctggggaagaatgctcaaggaatcatcaatcccatcgaggccaagcagagg
aaaggcaaaggtgctgtgggtgcttacggctccgagaggaccccacagtccttgcaggac
ttccctgtggtggactcagaagaggaaactgaggaggaatttcagaaggagctcagccag
tggcggaaggacccaaatggaggcaagaaaaagcccaagtacagctacaagacagtggaa
gagctgaaagccaagggcaggatcagcaagcagcttgcagcccctcagaaggagctgtcc
caggtcaaggtgatcgacatgacgggccgggagcagaaggtttattacagctacagccag
atcagccacaagcacaacatcccagatgacagcccccagcagcccctgggcaaggactcc
aagccccagggctttgctctgcccgagctggagcacaacctgcagctgctcatcgacatc
acggagcaggagatcatccagagcgaccggcagctgcagtacgagagggacatggtggtc
aacctcagccacgagatccagaagatggctgaggtgctgtcccacgaggagaaggccatc
agcaacctcagcaaggtgctggacatggtggaggagtgtgagaggcggatgcagccgggc
tgtgagaaccctctgaccctggatgagtgtgcaaagatctttgagactctgcaggacaag
tactatgaggagtacaggatgtcagacagggtcgacctggcagtggccatagtttatcct
ctcatgaaggaatacttcaagaactgggatcccctcaaggactgtacatatggcacagag
atcatagccaagtggaagagccttctggaaaacgaccagctgttatcccacagtgggcag
gacctgtcaacagatgctttccacagactgatgtgggagatctggatgccgtatgtcagg
aacattgtggcgcggtggcagccgaggaactgtggatccatggtggatttcttggatagc
tgggtgaatgttgttcctgtgtggatactggataacattctggatcagctcatctttccc
aagctgcagaaggaggtggagagctggaatcctctgacggacacggtgccgatccactcg
tggatccacccctggctgccgctgatgcaggcgcgcctggagccgctgtactcgcccatc
cgcaacaagctggccaacgccctgcagaagtggcaccccagcgactcctctgccaagctc
atccttcagccctggaaggatgtcttcactcctggctcctgggaggctttcatggtcaag
aacattgtgcctaaactcggaatgtgtctgaatgagctcatcatcaaccctcaccagcag
cacatggatgctttttactgggtgatcgactgggaggggatgatttctgtctccagcctt
gttgggctgctggagaaacacttcttcccaaaatggctgcaggtgctctgctcttggctc
agtaacagccccaactatgaagagatcaccaagtggtacctgggctggaagtccatgttc
tcagaccaggtgctggcgcatccctctatcaaagacaagttcaatgaagcccttgacatc
atgaaccgggccgtgtcctccagcgtgggtgggtacatgcagccgggcgcccgggagaac
atcgcgtacctgacgcacacggagcggcgcaaggacttccagtacgaggccatgcaggag
cggcgcgaggccgagaacatggcccagcgcggcatcggcgccgccgccggctccgtgccc
atgaacttcaaggacctcatccagaccaaggccgaggagcacaacatcgtcttcatgccc
gtcatcgggaagcggcacgagggcaagcagctctacaccttcggcaggatcgtcatctac
attgacaggggcgtggtgttcgtgcaaggggagaagacctgggtgcccacctcgctgcag
agcctcatcgacatggccaagtga
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