Lonchura striata (white-rumped munia): 110478211
Help
Entry
110478211 CDS
T05897
Symbol
TTC28
Name
(RefSeq) tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsr03037
]
110478211 (TTC28)
Cilium and associated proteins [BR:
lsr03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
110478211 (TTC28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
Rapsyn_N
TPR_14
RPN7
TPR_16
TPR_6
TPR_NPHP3
TPR_9
TPR_19
ANAPC5
Motif
Other DBs
NCBI-GeneID:
110478211
NCBI-ProteinID:
XP_021400403
UniProt:
A0A218V5G8
LinkDB
All DBs
Position
15:8983949..9062586
Genome browser
AA seq
2361 aa
AA seq
DB search
MMKWQPRKKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRES
LEPTYQQLQKMKLDKSPFVVVSVIGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFS
ALSSAYWSLGNTEKSTGYMQQDLDVAKSLGDQTGECRAHGNLGSAFFSKGNYREALTNHR
HQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELG
NMGAVYIAMGDFENAVQCHEQHLKIAKELGNKREEARAYSNLGSAYHYRRNFDKAMSYHN
YVLELAQELAEKAIEMRAYAGLGHAARCMQDLERAKQYHEEQLHIAESLQDRAAEGRASS
NLGIIHQMKGDYDTALRLHKTHLSIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHR
QELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALS
NLGNFHCTRGEFVQAAPYYEQYLRLSPELQDMEGEGKVCHNLGYAHYCLGNYEEAVKYYE
QDLALAKDLHDKLSQAKAYCNLGLAFKALMDFSKAEECQKYLLSLAQSLNNSQAKFRALG
NLGDIFVCKKDVHGAIKFYEQQLSLAHHVKDRRLEANAYAALGSAYRMVQKCDKALGYHT
QELEVYQELGDMSGECRAHGHLAAVYMSLGKYTMAFKCYEEQLELGQKLKDPSIEAQVYG
NMGITKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDFEEAIK
YYEQYLSVAQSLNRMQDQAKAYRGLGSGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQ
AYGELGSLHSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMGEYETALQ
YHQLDLQIAEETNNPAGQGRAYGNLGLTYESLGTYERAVVYQEQHLSIAAQMNDLVAKTV
SYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEESQH
QLYRASALFETIRHEVQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTR
AFADLLVERQTGQQDSDPYSPVTLDQVLETVNGQRGLVLYYSLAAGYLYSWLLAPGAGIL
KFHEYYLGDSLTENAGDFHEANSVALQTLTNSALEQHISSVREALGVDSYYTRACASSET
ESEAGDIMDQQFEEMNNKLNSMTDPTGFLRMVSRNNLLNRSCQSMTSLFSSTMSPVKDGT
SSLPRKQTSFTKPPLRALYDLLIGPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLK
GSSSNEYLYERFSLIAVPSIQSLNPSSKSHVRKNTPAYSSSTSMAAVIGNPKLPSAVMDR
WLWGPMPSAEEEAYMVSELLGCQPLVGSSSTKERVMSALTQAECVHFATHVSWKLAALVL
TPNTDSNPASSKSSFGNPYTIPESLRMQDDASDVESISDCPPLQEFLLTAADVLDLRLPV
KLVVLGSYQESNSKVTSDGVIGLTRAFLAAGAQCVLVSLWPIPVAASKMFVHAFYSSLLN
GMKASAALGEAMKTVQSSKQFSHPANWAGFMLIGSDMKLNSPSSLVGQALTEILQHPERA
RDALRVLLHLVEKSLQRIQNGQHNSMYTSQQSVENKVGGIPGWQALLTAVGFRLDPPASG
LPAAVFFPTSDPGDRLQQCSTTIQSLLGLPNPALQALCKLITASETGEQLISRAVKNVVA
MLHQVLVQLQAGEKEQDFPSAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKT
GKQATRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPVPQYQNPPFSP
TCPDSIASDAISVYSLSSIASSMSFVSKPENMLDGAGHRGRQDYERPKNIYPHRSAAQSQ
LSPQATAASKDEEEYEGFSIISNEPLASYQDNIKPRFSPDHKQPKTSQNGGIKASINSKG
SISTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEDSNPKLDPQE
LAQKILEETQSHLIAVERLQRSSSQISKSNSSEDGAPSPGGVSAFRSSETSAFSRPLSSS
QRNQSSSPLAIKPKPPTRSSSLQKVSSGYNSPTTSEMSNREGTGQHSGQPSPGCDSHGSL
NEQPPFKLKYPSSPYSAHISKSPRNISPSSGHQSPGGSTPSPALSYSSAGSARSSPADAP
DIDKLKLAAIDEKVQAIHNLKMFWQSTPHHSTGPIKILRGAPGTMTSKKDVLSLLNLSPR
HSKEESAEKLELKDLSIGQHLSASSQKIPSNGHRCPESTNAMTSAHSSPSNTLGAVRPLR
LPAGNGYKFLSPGRFFPSSKC
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatggcagccccggaagaaggcatacttccgtcagggcgtggccctgcagtac
ctgggccgccatgcggatgcgctggccgcctttgcctcggggctggcgcaggatcccaag
agccttcagcttctggtcggcatggtggaggccgccatgaagtctcccatgcgagagtcc
ctggagcccacctaccaacaactgcagaagatgaagctggacaagagcccctttgttgtg
gtgtctgttattggtcaggagctcctgactgcaggccaccacggggcctctgtggtggtg
ctggaggctgccctgaagattggcacttgcagcctgaagctgcggggatcggtgttctct
gcactgagcagtgcgtactggtccctcgggaacacggagaaaagcactggatacatgcag
caggacttggacgtagccaagagtttaggtgaccagacaggagaatgccgagctcatgga
aatctgggctctgcattcttctccaaaggaaattaccgggaagcccttactaaccacaga
catcagctggtgcttgccatgaagctcaaggacagagaggcagcatcctcggctctgagc
agtctgggccacgtgtacacggccatcggggactacccaaatgcactggctagccacaag
cagtgtgtcctccttgccaagcagtccaaagatgagctctccgaggcacgggagctgggc
aacatgggagcagtgtacattgccatgggggattttgaaaacgcagtgcagtgccacgag
cagcacctgaagatcgccaaggagctggggaacaagcgggaggaagctcgagcctacagc
aacctgggcagtgcttaccactaccgcaggaactttgacaaagccatgtcctaccacaac
tacgtgctggagttggcccaggagctggctgagaaggccattgagatgcgagcttacgct
ggcctgggccatgcagctagatgtatgcaagatctggagagggctaagcagtaccatgaa
gaacagttgcacattgctgagagcctgcaggaccgagctgctgaaggcagagcctcctcc
aatctaggaatcattcaccagatgaaaggtgactatgacaccgcgctgcggctgcacaag
acacacctgtccatagcgcaggagctgagcgattacgcggcccagggccgggcctacggc
aacatgggcaacgcctacaacgccctgggcatgtatgaccaggctgtcaagtaccatcgg
caggagctgcagatctccatggaggtcaacgaccgcgcttctcaggcatccacacacggg
aacttggcagttgcttatcaggcgctgggtgcccatgaccgtgctctgcagcactaccaa
aatcatctcaacattgcccgggagctgcgcgacatccagagcgaagcgcgagccctcagc
aacttgggcaacttccactgcacgcgaggagagttcgtgcaggcggccccgtactatgag
cagtacctgcgcttgtcccctgagctgcaggacatggaaggcgaggggaaagtttgccac
aaccttggctatgcccattattgcctcgggaactatgaggaagctgttaagtactacgag
caggatcttgccttagcaaaggatcttcatgacaagctgagccaggccaaagcctattgc
aacctgggcctggccttcaaagccttgatggacttcagcaaagcagaggagtgtcaaaaa
tacctgttgtccctggcacagtctctgaacaattcccaggccaaattccgagctctgggg
aacttgggggatatttttgtctgtaaaaaagatgtacatggtgcaataaaattttatgag
cagcagttgagcttagcccatcacgttaaagacaggagactggaagccaatgcctatgca
gccctgggctctgcatacaggatggtacagaagtgtgacaaggctttaggttaccataca
caggagctggaggtgtaccaagagctgggggatatgtcgggtgaatgcagagcacatggt
caccttgctgcagtgtatatgtcacttgggaagtacaccatggccttcaagtgctacgaa
gaacagctggagctggggcagaagttgaaggaccccagcatcgaagcccaggtctatggt
aacatgggcattaccaagatgaacatgaatgtcatggaggaagccattggctactttgag
cagcagctggccatgctgcagcagctcagtgggaacgaatccgtattagatcggggccga
gcgtatgggaacctgggagattgttatgaggctctgggagattttgaggaagctataaag
tattatgaacagtacctgtctgtggctcaaagcttgaaccgtatgcaagatcaggcgaag
gcctaccgaggcttgggcagtgggcacagggctatgggaagtttacagcaggctctggtg
tgctttgagaagaggcttgtagtggcacacgagctgggggaggcatttaacaaagcccag
gcttacggggagctgggaagcctgcacagccagctgggcaactacgagcaagccatttcc
tgcctggagcggcagctgaacatcgcccgggagatgaaggaccgagccctggagagcgac
gctgcctgtggcctgggcggggtgtaccagcagatgggcgagtacgagaccgccctgcag
taccaccagctggacctgcagatcgctgaggagaccaacaaccccgccggccagggccgc
gcctacggcaacctgggccttacctacgagtccctgggcacctacgagagggcagtggtt
tatcaggagcagcacctcagcattgcagcgcaaatgaacgacctcgtagccaaaaccgtg
tcttacagcagcctggggaggactcatcatgctttacagaattactcgcaggctgtgatg
tacctgcaggaaggactgaggctggcagagcagctgggtcgcagagaagatgaagcaaaa
atccgtcacggcctcggcctctccctctgggcgagtggcaacctggaggagtcccagcac
cagctgtaccgcgcctccgcgctgtttgaaaccatccgccacgaggtgcagctgagcacg
gattacaaactgtcactcttcgacctgcagacatcctcctatcaggccctgcagcgagtt
cttgtcagtctgggtcaccatgatgaggcactagcagtagcagagagaggacgaacgagg
gcttttgctgacctgctcgtggaacgtcagactggacagcaggactcggatccctactct
cccgtgacccttgaccaggtcctggagactgtgaatggccagaggggacttgttctctac
tactcactggctgcaggttatctgtacagctggctgctggctcctggggcaggaattctg
aaattccatgagtattatctgggtgacagcctgacagaaaatgctggggacttccatgaa
gccaacagcgtggccctgcagacactgacaaactcagcactggagcagcacatctccagt
gtgagggaggctctgggagtagattcctactacaccagagcttgtgctagcagcgagaca
gagagtgaagctggggatatcatggaccagcagtttgaggagatgaataacaagctgaac
tcaatgactgatccaactggcttcctgaggatggtcagcaggaacaacctattgaacagg
agctgtcagagcatgaccagcctgttcagcagtaccatgtctcctgtaaaggatggaaca
tcatcacttccaaggaagcagacttctttcaccaagcccccactccgtgctctctacgac
ttactcataggacccatggaaggaggtttgatgcattccagtgggcctgttggccgccac
cgtcagctggtcctggttctggagggagaactgtacctcattccttttgctctcctgaag
ggcagttcctccaacgagtacctctacgagcgtttcagcctcattgcagtgccatccatc
cagtcactgaatcccagctccaagtcccatgtgaggaagaatactcctgcttactccagt
tctacctcaatggcagctgtgataggaaatcccaagctcccttcagcagttatggacagg
tggctgtggggacctatgccttctgcagaggaggaagcatatatggtatctgaattactt
ggctgccagcccttagttggcagctcatcaacaaaagagagagtcatgagtgccctcact
caggcagaatgtgtccattttgcaacccatgtctcctggaaattggctgctttggtcctg
acacccaacactgacagcaacccagccagcagcaagagttcctttgggaacccctacaca
atcccagaatctcttaggatgcaggatgatgccagtgatgtggagagcatctcagactgc
cctcctctccaggagttcctgcttacagcagctgatgtgctggatctgcgtcttcctgtc
aagctggtggttcttggctcttaccaagagtccaacagcaaagtcacttctgatggagtc
attggcttgacaagagcattcctggctgctggggctcaatgtgtccttgtgtcactttgg
cccattcctgtggctgcttccaaaatgtttgtgcacgccttctattcctctctcttaaac
gggatgaaagccagcgcagccctgggagaagcaatgaaaactgtgcagagcagcaagcag
ttctcccatccagccaactgggcaggcttcatgcttattgggagtgatatgaagctgaac
agcccttcctcactggtaggacaggccctgactgagatcctgcagcaccctgaaagggcc
cgggatgctctgcgtgttctccttcatctggtggagaaatcattgcagcgaatccagaat
gggcagcacaactccatgtacacctcccagcagagcgtggagaataaagttggtggcatt
ccaggctggcaggcactcctcacagcagtgggatttcggttggacccaccagccagtggc
ctcccagcagcagtgttcttcccaacctcggaccctggggaccggctgcagcagtgcagc
accaccatccagtccctcctaggtttgcctaaccctgcacttcaggcactttgtaaactt
atcacagcttcagaaacaggagagcagcttatcagcagggctgttaaaaatgtggtggca
atgctgcatcaagtcctggttcaacttcaagcaggcgagaaggagcaagatttcccctct
gcaccaatccaggtctccatcagtgtccagctctggaggctgcctggctgtcatgagttt
ctggcagctctaggttttgacctttgtgaagttggccaagaggaggtcattctgaaaact
gggaaacaagctaccaggaggaccatgcactttgctctacaatccttgctggcacttttt
gattctacagagctgcccaagcgccttagcctggacagttcctcatcactggagtcactg
gcttctgctcagtctgtttccaaccctgtaccccagtatcaaaaccctccattctctcct
acctgtccagacagcattgcctcagatgccatttctgtgtacagcctgagctccattgct
tcttccatgagctttgtttccaagccagagaacatgctggatggggcaggacacagaggg
cggcaggattatgagaggcccaagaatatctatccacacaggtctgcagctcagagccag
ctgtcaccacaagccactgcagccagcaaagatgaggaagagtatgaaggtttctctata
atcagcaatgagcctttagccagttaccaagacaacataaaaccaagattttcccctgat
cacaaacagcccaaaactagtcagaacggaggcattaaagcatccatcaactccaaaggg
agcataagtactccaaattctcctgttaaaatgactctcatcccaagcccaaattcacct
ttccaaaaagttggaaaacttgcaagttctgatactggggaatctgaccagtctagcact
gagactgacagcaccgtcaaatcccaggaggacagtaatccaaagcttgatccacaagag
ttggcccaaaaaattctggaggaaactcagagtcacctcattgctgttgaacgtcttcag
agaagcagcagccagatcagcaagagcaacagctcggaggatggggctcccagcccgggc
ggcgtgtccgccttccgctcctcggagaccagcgccttcagccgcccgctcagctccagc
cagaggaaccagtcctcttcacctcttgcaatcaaaccaaagcctccaacgaggagttca
tcccttcagaaggtgagctctggctataacagccccacaacgtcggagatgtcaaacaga
gaaggcacgggccagcacagtggacagccatctccaggttgtgattcacatgggtcccta
aatgagcagcctccctttaaactcaagtaccccagctctccttacagtgctcacatttct
aaatcacccagaaatatctctccgagctcagggcatcagtcccctggtggcagcactcca
tctcctgctctttcttattcctcagctggttctgctcgctcaagcccagctgatgcccca
gacatagacaaattaaaattggctgccattgatgaaaaagtgcaagcaattcacaactta
aagatgttctggcaaagcactccccaccactctactggtccaataaagattctccgagga
gctcctggaacaatgacttctaagaaagatgtcctcagcttgctcaatttatcaccacgg
cacagcaaagaagaaagtgcagagaagctggaactgaaggacctgtctattgggcaacac
ctttctgcttcatcacagaagatcccttcgaatggacacagatgccctgaaagcacaaat
gccatgacatcagctcattcctcacctagcaacaccctgggagctgtgcgtcccctgagg
ctgccagctgggaacgggtataaatttttgtcaccaggaagatttttcccttcctccaaa
tgttga
DBGET
integrated database retrieval system
