Lonchura striata (white-rumped munia): 110478400
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Entry
110478400 CDS
T05897
Symbol
MRE11
Name
(RefSeq) double-strand break repair protein MRE11
KO
K10865
double-strand break repair protein MRE11
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03440
Homologous recombination
lsr03450
Non-homologous end-joining
lsr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110478400 (MRE11)
03450 Non-homologous end-joining
110478400 (MRE11)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
110478400 (MRE11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsr03032
]
110478400 (MRE11)
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110478400 (MRE11)
DNA replication proteins [BR:
lsr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
110478400 (MRE11)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
110478400 (MRE11)
BRCA1-C complex
110478400 (MRE11)
NHEJ (non-homologous end-joining)
MRX complex
110478400 (MRE11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
110478400
NCBI-ProteinID:
XP_021400644
LinkDB
All DBs
Position
1:78362897..78382376
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AA seq
704 aa
AA seq
DB search
MSTASSQNDEDTFKILVATDIHLGYLEKDPVRGNDTFVTFNEILDHAQKNEVDFVLLGGD
LFHENKPSRKTVHSCLESLRKYCMGDRPVQFEILSDQAVNFHYSKFPWVNYQDENLNISI
PVFSIHGNHDDPTGADALCALDILSCAGLLNHFGRSTSVEKIDISPILLRKGRTKIALYG
LGAIPDERLYRMFVNKQVTMLRPKEDEDSWFNLFVIHQNRSKHGATNYIPEQFLDDFINL
VVWGHEHECKIAPFQNEQQRFYVSQPGSSVVTSLSPGEAVKKHIGLLHVKGKKMKMEKIA
LETVRTFHIEDIVLADHPELFNPDNPNVTQAIQAFCMEKVELMLDTAERERLGNPRQPEK
PIIRLRVDYAGGFEPFSVHRFSQKYMHRVANPKDIIHFFRHREQKEKKDIDLNFGKLVSR
PAEGTTLRVEDLVKQYFQTAEKKVQLSLLTERGMGEAVQEFVDKEEKDAIEELVKFQLEK
TQRFLKERRTDAVEEKIDEEVRKFRESRKKNTEEEDKEVREAMIRARAHRSEDEVLVAAS
SDEDSMDIEMTGTSNPSDGLSSTLSRGRGRARGRARGARGQNSTARGSSRRGRGATSQES
ASGSRSYKPVSGPGKNMSIMDAFRSSKTDHSSNSFQSYSEDIIDVDSDPEDTSFVPSSSK
IKQRLPTMSSLSKRSSQSQASRGVDFESDEDDPFMSPATSRRTK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgccagctcacagaatgatgaagatacctttaaaatactcgttgctactgat
attcatcttggctatttggagaaggacccagtgcgtggaaatgacacatttgtaactttc
aatgaaattctggaccacgctcaaaaaaatgaagtggactttgttttattaggtggggac
ctttttcatgagaacaaaccctccagaaaaacagtacactcttgtttggagtcactaaga
aaatactgcatgggtgatcgtcctgttcagtttgaaattttgagtgatcaggcagttaat
tttcattacagcaagtttccttgggtgaattatcaggatgaaaatctcaacatttctatt
ccagtttttagcattcatggcaatcatgatgatcccacaggggcagatgcactgtgtgca
ttggatattttaagctgtgcaggactgctgaatcactttggacgttcaacttctgtggag
aaaatagatattagtcccattttattgcgtaaaggtagaacaaaaattgctctctatggc
ttgggagcaattccagatgagaggttgtaccgtatgtttgtcaataagcaagtaaccatg
ctgagaccaaaggaagatgaagatagttggtttaacttgtttgtgatacatcaaaatagg
agcaaacatggagctaccaactacattccagaacaatttttagatgactttattaatctt
gttgtgtggggtcatgaacatgagtgcaaaatagctccattccaaaatgaacagcaacgt
ttctatgtttctcagccaggaagttcagtggtgacatctctgtctcctggagaagctgtg
aagaaacacattggtttgctgcatgttaaagggaaaaaaatgaaaatggagaagattgct
ctagagacagtgcgaactttccatatagaggatattgttctagctgatcatccagagctt
tttaatcctgacaatcctaatgttactcaggcaatacaggcattctgcatggaaaaggtg
gaattgatgctggacactgcagaaagagaacgcttgggaaatccccgccagccagagaag
cctatcataagattaagagttgattatgcaggtggctttgaaccattcagtgtccatcgc
ttcagccagaagtacatgcatagagtggctaacccaaaagacatcatacactttttcagg
catcgtgaacaaaaagagaagaaagatattgatcttaattttggaaaactggttagcaga
cctgctgagggaacaaccctgagggtggaagaccttgtaaagcagtatttccagacagca
gaaaagaaagtacagctttcacttctaactgaaagaggaatgggagaagcagtgcaagag
tttgtggacaaagaggaaaaagatgccatagaagagctggtgaaatttcaactagaaaaa
acgcagagatttctcaaggagcgtcgcactgatgcagtggaagaaaaaatagatgaggag
gtgagaaaattcagggagagtagaaaaaagaatactgaagaagaggataaggaagtccgt
gaggcaatgatcagggccagagcccaccgatctgaggatgaagttctggttgcagcctcc
agtgatgaagattctatggatattgagatgacaggcactagcaatccaagtgatggcctt
tcttcaacactgagccgaggaaggggtcgggcaagaggtagggcaagaggtgcaagagga
caaaattcaacagcaagaggttcatcacgaagaggaagaggagccactagccaagagtca
gcttctggcagcagatcctacaagcctgtatctgggcctggcaaaaatatgtctatcatg
gatgcctttaggtcttcgaaaacagaccactcttcaaattcattccagtcttactctgag
gatattatagatgttgattctgatccagaagatacttcttttgttccttcctcttctaaa
ataaaacaaaggttgccaactatgtcttcacttagtaagagaagttcacaaagccaagca
tctagaggagttgattttgagtcagatgaggatgatccattcatgagccctgcaacgtca
agaagaactaagtga
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