Lonchura striata (white-rumped munia): 110478628
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Entry
110478628 CDS
T05897
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110478628 (TIA1)
03041 Spliceosome [BR:
lsr03041
]
110478628 (TIA1)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110478628 (TIA1)
Spliceosome [BR:
lsr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110478628 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
Calcipressin
XOO_2897-deam
Flg_new_2
Motif
Other DBs
NCBI-GeneID:
110478628
NCBI-ProteinID:
XP_021401072
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All DBs
Position
22:4215911..4229603
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AA seq
364 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFSEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS
TFETNTKQLSYDEVVTQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY
SFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETADTAGPVPQGQLSYPPAYGQWAQW
YGGAQLGQFVPNGWQVPAYGVYGQAWGQQGFGQSQPWLGPGYGPGQNGAVVPAQPGFRVG
FESP
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaaatgcccaagaccctctacgtggggaacctctccagggacgtgaccgag
gctctgatcctccagctcttcagccagatcggcccctgcaagaactgcaagatgatcatg
gatacagctggcaacgacccctactgcttcgtggagttctccgagcaccggcacgcggcc
gcggcgctggctgccatgaacggcaggaagataatgggtaaggaggtcaaagtgaactgg
gccaccacccccagcagccagaagaaagacaccagcaatcatttccacgtctttgtcgga
gacctcagccctgagatcacaactgaagacatcaaagcagcctttgctccctttggaaga
atctcggacgcgcgggtggtcaaggacatggccacgggcaagtccaagggctacggcttc
gtctccttcttcaacaaatgggacgccgagaatgccatccagcagatggggggccagtgg
ctcgggggccggcagatcaggaccaactgggccaccaggaaacctccagctcccaagagc
acctttgagacaaacaccaaacaattgtcctacgacgaggtggtcactcagtccagcccc
agcaactgcaccgtgtactgcgggggggtcacctcgggcctcacagagcagctgatgcgc
cagaccttctcccccttcgggcagatcatggagatccgagtgttcccggacaaaggctac
tccttcgtcaggttcagctcccatgagagcgccgcccacgccatcgtctccgtcaacggc
accaccatcgagggccacgtggtcaagtgctactggggcaaggagacggccgacacggcc
gggcccgtgccgcagggccagctgagctacccgccggcctacgggcagtgggctcagtgg
tacggcggtgcccagctgggccagttcgtgcccaacggctggcaggtgcccgcctacggc
gtctacggccaggcctggggccagcagggcttcgggcagagccagccgtggctgggcccc
gggtacggcccaggccagaacggcgccgtggtgccggcccagcccggcttccgcgtgggc
ttcgagagcccctga
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integrated database retrieval system
