Lonchura striata (white-rumped munia): 110478720
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Entry
110478720 CDS
T05897
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110478720 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110478720 (MYO5B)
04131 Membrane trafficking [BR:
lsr04131
]
110478720 (MYO5B)
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110478720 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsr04812
]
110478720 (MYO5B)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110478720 (MYO5B)
mRNA cycle factors
P-body specific factors
110478720 (MYO5B)
Membrane trafficking [BR:
lsr04131
]
Others
Actin-binding proteins
Myosins
110478720 (MYO5B)
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
110478720 (MYO5B)
Cytoskeleton proteins [BR:
lsr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
110478720 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
5_3_exonuc
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
110478720
NCBI-ProteinID:
XP_031363127
LinkDB
All DBs
Position
Z:complement(72372977..72532020)
Genome browser
AA seq
1849 aa
AA seq
DB search
MSAAQLYTKYTRVWIPDPDEVWRSAEIIKDYKVGDKSLQLKLEDETLYEYPIDLQGSELP
FLRNPDILVGQNDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYE
QDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSASETNIEAKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASSSLPEFKDLGLTCAEDFFYTSQGGDTSIDGVD
DADVFEKTRHAFTLLGVKESHQMTIFRIIAAILHLGNLKIQGERDGEVCHVSSEDEHLKN
FCSLLGVEHSQMQHWLCHRKLVTTAETYVKSMTLHQVVNARNALAKHIYAQLFNWIVQHV
NKALHTTVKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EAIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHATSQHFQK
PRMSNTSFIILHFADKVEYQSEGFLEKNRDTVYEEQINILKASKYQMVADLFQEEKDAVP
ASAMPKRAPWINVRSAKPAFKAANKEHRKTVGHQFRNSLQLLMETLNTTTPHYVRCIKPN
DEKLPFKFDPKRAVQQLRACGVLETIRISAAGFPSRWSYPDFFNRYRVLMNKRDLSKKDK
KQICQSLLEDLIKDPDKFQFGRTKIFFRSGQVAYLEKLRADKFRAATIMIQKTVRGWLER
TRFRRLRRATLTLQCYTRGHLARRLFEHLRRTRAAIILQKQYRMLRMRRAFLRVRSATLT
IQAFARGMFVRRIYHQMLMEHKATILQRYARGWLARARFRRTRAAAVVLQSHWRRLKARR
QLQALRIEARSVQHLKKLNIGMENKVVQLQRKVDEQNKENKLLNEQLSILTSAHSSEVGK
LKKELQQYQQTQQGDGKQLLSLQEETERLQRELKRAQGEREVMEDSHSKERDLLKKRISD
LEEENALLKQEKEELNSKILCHSEDEFARNTVEENMQMRKELEEERSRYQNLVKEYASLE
QRYDNLRDEMTIFKHTPGHRRNPSNQSSLESDSNNPSICTSEIGDTEDVIQQVEEIGMEK
AAMDMTLFLKLQKRVRELEVERKKLQAQLEKKEQESKKSQVIEIKTEVTSEHEDFAYNSL
KRQELESENKKLKNELNELRKAIADHATENNSSNDVQDGYSLLLNQLKSANEELEVRKEE
VLILRSQIMKAAQQKEAEKNMVKERESISPSASWPNSDRHVDQEDAIEAYQGMCETNRKT
EDWGYLNEDGELGLAYQGLKQVARLLEAQLQDQRREHEEEMEALKNQVDLMQEELEKQQQ
AFLQTLQLSPEVQVEFGLQQEITRLTNENLDLKELLEKLEKNEKKLKKQLKIYMKKVQDF
EASQTMVPVERRLHERNMQVAVQRKEKDFQGMLEYYKEDEPLLIRNLITDLKPQAVSATV
PCLPAYILYMCIRHADYINDDQKVHSLLTSTINGVKKVLKKHQDDFEMTSFWLANMCRLL
HCLKQYSGEECFMTQNTAKQNEHCLKNFDLTEYRQVLGHLSIQIYQQLIKIAQGILHPMI
VPAVLENESIQGLSSVKPVGYRKYSSSVGDICYSLDEMIHHLNTFHSIMCDQGLDPEIIQ
QVFKQLFYMINAITLNNLLLRKDVCSWSTGMQLRFNISQLEEWLRGKNLQQSGAAQTLEP
LIQAAQLLQLKKKTSEDAEAICSLCTSLTTHQIVKILNLYTPVNEFEERVTVAFIRNIQT
QLQERNDPTHLLIDFKYMFPVLFPFNPSAITMDSIHLPASLNLDFLNKV
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgcgcagctctacaccaagtacactagggtttggattcctgaccctgatgaa
gtttggagatcggcagaaattatcaaggattacaaagtgggagataaaagcctccagctg
aaacttgaagatgaaactctctacgaataccccattgacctccaagggagcgagctgccc
ttcctacgtaatccagacatcctggtggggcagaatgacctgacagccctgagctacctg
cacgagcctgcggtcctgcacaacctcaaagtcaggttcctcgagtccaaccacatctac
acctactgtggtatcgtcctggtggccatcaacccctatgagcagctgccaatctacgag
caggatgtcatctacgcctacagcggccagaacatgggggacatggacccccacatcttc
gccgtggccgaggaagcctacaagcagatggccagggatgaaaagaaccagtccatcatc
gtgagcggggagtcgggggcgggcaagacggtctcagccaaatacgccatgcgcttcttc
gccaccgtcgggggctctgccagcgagaccaacatcgaagccaaagtcctggcctccagc
cccatcatggaggcgattggaaatgctaaaacaacaagaaatgacaacagcagccgcttt
gggaaatacattcaaattggttttgataaaagataccacatcattggtgccaacatgagg
acatatctgctggaaaaatctcgggttgtatttcaggcagaggacgagcgcaactaccac
atcttctaccagctctgtgcctcctcaagcctcccagaattcaaagaccttggactcaca
tgtgccgaagactttttctacacttctcagggaggtgacacgtccatcgatggtgtggac
gatgctgatgtctttgagaaaaccagacatgccttcaccctgcttggagtgaaggagtct
catcagatgaccatttttaggataattgctgccattctgcacctggggaacttgaaaatc
caaggggaacgagacggggaggtctgccatgtgtcgagtgaggacgagcacctgaaaaac
ttctgcagcctgctgggtgtggagcacagccagatgcagcactggctctgccaccgcaag
ctcgtcaccacggccgagacctacgtgaagagcatgaccctgcaccaggtggtgaacgcc
aggaacgccctggccaagcacatctacgcccagctcttcaactggatcgtgcagcatgtc
aacaaggccctgcacaccactgtgaagcagcactccttcatcggcgtgctcgacatctac
gggtttgaaacttttgaagtgaatagctttgaacagttctgtatcaactatgccaatgaa
aagctccagcagcagttcaactcgcatgtgtttaagctggaacaagaggagtacatgaag
gaggcaatcccttggactctcatagacttctacgacaaccagccatgcatagacctgata
gaagccaagcttgggatcctggacctgctggatgaagagtgcaaggtgcccaagggcacg
gaccagaactgggcgcagaagttgtatgaccgccacgccaccagccagcacttccagaag
ccacgcatgtccaacacctccttcatcatcctgcacttcgctgacaaggtggagtaccag
agcgaggggtttctggagaagaacagggacaccgtctacgaggagcagatcaacatcctg
aaggccagcaagtatcagatggtagcagacttattccaggaggagaaggacgccgtgccc
gcctctgccatgccaaagagagcaccctggatcaacgtgcgctctgcaaaaccagccttc
aaagctgccaacaaggagcacaggaaaacagtggggcaccagttccgcaactccctgcag
ctgctgatggagaccctgaacaccaccaccccgcactacgtgcgctgcatcaagcccaac
gacgagaaactccccttcaagtttgatcccaagagagcagtgcagcagctgagagcctgt
ggagtgctggagaccatccggatcagtgcagctggcttcccatccaggtggtcctaccct
gattttttcaatagataccgtgtgcttatgaacaagagagacctctctaagaaggacaag
aaacagatctgtcagagcctcctggaagacctcattaaggatccagacaagttccagttt
ggccgtaccaagatctttttccgttcaggccaggtggcatatctggagaaactgcgggca
gataagttcagagctgccaccatcatgatccagaagacagtgaggggctggctggagagg
accaggttccggaggctgcgacgagccaccctcaccctgcagtgctatacccgtgggcac
ctggcacgcaggctttttgaacacctgaggaggacaagggctgccatcatcttgcagaag
caataccgaatgctgcggatgcgccgggccttcctgagggtccgcagcgccaccctcacc
atccaggcttttgctcggggcatgtttgtcaggaggatttaccaccagatgctgatggag
cacaaggccaccatcctgcagaggtacgcgcggggctggctggcccgcgcgcggttccgc
cggacccgggccgccgccgtggtgctgcagagccactggcggcgcctcaaggcccggcgc
cagctccaggcgctccgcatcgaggcacgctcggtacagcacctcaagaagctcaacatc
ggcatggagaacaaggtggtgcagctgcagaggaaggtggatgagcagaacaaggagaac
aagcttctgaatgagcagctgtccatcctgacatcagcccactcctccgaggtgggaaag
ctgaagaaggagctgcagcagtaccagcagacccagcagggtgatggcaagcagctcctc
agcctgcaggaggagacggagcggctgcagagggaactgaagagggctcagggggagagg
gaagtcatggaggacagccacagcaaggagagggacctgctgaagaagcgtatctctgac
ctggaagaagaaaacgctctcctgaagcaggaaaaagaagagctgaacagcaagattctc
tgtcattctgaagatgaatttgcacgaaacacagttgaggaaaatatgcagatgaggaaa
gagctggaagaagaaagatctcgttatcagaacctggtaaaagagtatgcaagtctggag
cagagatatgacaacttgagggatgaaatgactatttttaagcacacaccagggcacagg
agaaacccatccaaccagagcagcttggagtctgattccaataacccatccatctgcacc
tctgagatcggggacacagaggatgtgatccagcaggtggaggagattgggatggagaaa
gcagccatggacatgaccctcttcctgaagctacagaagcgagtgagggagcttgaggtg
gagaggaagaagctgcaagcccagctggagaaaaaggagcaagagagcaagaaatcccag
gtaattgaaataaagactgaagtgacttcagaacatgaagattttgcatataacagcctg
aagaggcaagagctggagtcggagaacaagaagctgaaaaatgagctcaatgagctgagg
aaggccatcgcagaccacgccacggagaacaactcctccaacgacgtgcaggacggctac
agcctccttctgaaccagctgaaatcggccaacgaggagctggaggtgcgcaaggaggag
gtgctcatcctcaggtcgcagatcatgaaggcagcccagcagaaagaggcagagaaaaac
atggtaaaggagagggagagcatctcccccagtgccagctggcccaacagtgaccggcac
gttgaccaggaggacgcgatcgaagcctaccagggcatgtgcgagaccaaccgcaagact
gaggactggggctatctcaatgaagatggagagctcggcttggcttatcaaggtttaaag
caagttgccaggttgctggaagcccagctccaggaccagagaagggagcatgaggaggag
atggaagctctgaaaaaccaggtggatttaatgcaagaggagctggagaagcagcagcag
gcattcctgcaaactctgcagctctctccagaggtccaggtggagtttggacttcagcaa
gaaattacacgtcttaccaatgaaaacctggatcttaaagaattgctggaaaagttggaa
aagaatgaaaagaagctgaagaagcagctgaagatttacatgaagaaggtccaagatttt
gaagcatcccagacaatggtgccagtggagaggaggctgcacgagcggaacatgcaggtt
gctgtccagaggaaggagaaggattttcagggcatgctggaatattacaaagaagatgag
ccactcctcatccgaaacctcattacagatctcaaaccccaggcagtgtctgctactgtt
ccctgccttcctgcttacatcctctacatgtgcatcagacacgcagattacatcaatgat
gaccagaaggtgcactccttgctcacctccaccatcaacggtgttaagaaagtgctgaag
aagcaccaggatgactttgagatgacatcgttctggctggcgaacatgtgccgcctgctg
cactgcctgaagcagtacagcggggaggagtgcttcatgacccaaaacacggcaaagcag
aatgagcactgcctgaagaacttcgacctgaccgagtaccgccaggtgctgggccacctc
tccatccagatctaccagcagctcatcaaaattgcacagggcatcctgcatcccatgatc
gtgcctgctgtgctggaaaatgagagtatccaagggctttccagtgtcaaaccggtgggc
tacaggaaatactcctccagtgtgggtgacatctgctacagcttggatgaaatgattcac
cacctgaacacattccacagcatcatgtgtgaccagggcctggacccagagatcatccag
caggtgttcaagcagctcttctacatgatcaacgctatcaccctgaacaacctcctgctg
aggaaggatgtctgctcatggagcacgggcatgcagctgaggtttaacatcagccagctg
gaggaatggctgcgtgggaagaatctgcagcagagtggagcagcacaaactttggagccc
ttgattcaggcagcacagctcctgcagctgaaaaagaaaacgtcggaggatgctgaggcc
atctgctccttgtgcacatcgctcacgacccaccagattgtaaagatacttaatctctac
actcctgtgaacgagtttgaagaacgtgtgacagtagctttcatacgaaacatacagacg
cagttgcaagaacggaatgaccctacacacttgctgatagacttcaagtacatgttccca
gttctgttcccattcaacccatccgccatcaccatggactccattcatctccctgcttct
ctcaacttggattttctcaataaagtctga
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integrated database retrieval system
