Lonchura striata (white-rumped munia): 110478722
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Entry
110478722 CDS
T05897
Symbol
GCC2
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110478722 (GCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110478722 (GCC2)
Membrane trafficking [BR:
lsr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110478722 (GCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
YabA
FAZ1_C
Motif
Other DBs
NCBI-GeneID:
110478722
NCBI-ProteinID:
XP_021401205
UniProt:
A0A218V4Z0
LinkDB
All DBs
Position
1:complement(27456577..27486349)
Genome browser
AA seq
1719 aa
AA seq
DB search
MTEAEAARGGCSGAGSGCAAAISPPLQPAGSAMEVQDAGQEVVGSSGTPGSGKSKLDTLP
KEDLIKFAKKQVMLIQKVKSRCAELEKEIEELRSKAAAAGADDIIQALTERLDVVLLEKA
ESQQQCIALKKENIQIKQEAEAAVAKTEELQKQLEQARIDSLEEIKALKSELANAQCKHN
EDLKKLKMELDEQVKKQIELLEQVECYNDSQKEVKRLQDDVQRMKSTYEEQILCLNKQLE
AVNEDKNKEVTYLQETIKSNSQCYHNEIKTLNEELKKLKTAHQEELSELMHQIEISSKEN
EEKQNQINQLQHNLTEKNVQDEMSAQADQREYDLEQLREVLHKNLENKRDVADTQEEPCV
KAKMEEKVRYLEHSLEELQSQHSILKDELTYMSNVKIKLEEEIHRMKDEYFHEREDLDFK
INELQLTKEDYCCVIEKLKLELQAAGQHYETVAKEHKLEIQTLKDQHQREISELNETLLS
GSEKEQMALVFEMQELREQLEKLTQEKEEAVSSYNSLRETMETLQAELGESAGKISQEFE
SMKQQQASDVSQLQQKLRAAFNERDVLLETVNRLQEEVEKLSSNQSEIEELKCKIVSLQE
DNSAMTSSIDQKEITVRELEEKIVALTDQNRDILNDLKCLGEERKTLQETCKQEQVKIQE
LQQEVDVANQCNNDLKQKVEELTERLNEALTSKGENTQMLEQLEKQIESLVRDKEQLSSE
VYTLHEENKKLSQEKGELSEKLGRTTSEKDSCLVLKEQSENLEKKLQIMTAEKDHISALL
ENEQVHTSLVRTQLYHLLEQVGFSISDSNEEYDCLNLLKIANECLSKIKEEQCLALQKEE
EVISLQREVERLEEENAAQHREHRSLIQDFEKEKNLLREELEGVLSEKEALQHDIQELRN
ASEKTRIENQDLLANTEEISQKLALYESQLQEQQKGPEKHDDLNFILEQKETELRNVKDE
LSSLKNLMETMTGKTDQQSSVAELQEKIGVLEKESAEKGEKLNKIKVVAVKAKKELDASR
KEMQTLKEELELVRSEKDQLSASMKDVIQGAESYKNLLMEYDKQGEQLDSEKGKANNLER
QIDDLTRQLQVSSEQHDQLHSANEDLLARVETLQNNAKLLETQILEIQRAKAKTDKELEA
EKLLREQKTKEHSGALREIEELQIQLQKEKKHLQKTMQELELARKDAHKSTLMDMEIADY
ERLVKELNQKITDKDSRIEDLEQETGIQKQKHETLQEEIKSLQSTMQQDEERNAKIKQLL
VKTKKELADSKQAENDHLMLQASLKGELEASQQQVEAYKIQVAVLTSEKHKVQEQLRTSS
EQHQRTMSACQQKIATLQEECRAAQAEQASVTSEFESYKVRVHNVLKQQKNKSTARTESE
GAKQEREQLEMVIDQLKVKLQDAQHNSQMNASELQALQSEHDTLLERHNKMLQETVAKEA
ELREKLCTIQSENMVIKTEHAQALSQLTAQNEALRNNFRDQVRNLQEEHRKTVETLQQQL
SRVEAQLFQLKSEPSTRGPAVANLATKSLRERRNTDLPVLDVHTVAREEGEGMETTDTES
VSSASTYVQSLEQLLNSPEAKPEPSQWQADLTKDELIQKLNTTAKSADHLNELLRESEAT
NAILMEQIKLLKNEIRRLERNQEREKSVANLEYLKNVLLQFIFLKSGSEKERLLPVIDTM
LQLSPEEKGKLVAIAQGEEESTSRPSGWASYLHSWSGLR
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggcggaagcggcgcggggaggatgtagcggcgctggcagcggctgtgccgcc
gcgatctccccgcccctgcagccggccggctccgccatggaggttcaagatgctgggcaa
gaggtggtggggtcttctggaacaccaggatcaggcaaatccaagctggacacattgccc
aaagaagacctcatcaagtttgcaaaaaagcaagttatgcttatacagaaagtgaagtca
agatgtgcagaactggagaaagaaattgaagaactccgatctaaagcagctgctgcagga
gctgatgatattattcaggctctcacagaaaggctggatgttgtgcttctggaaaaagct
gaaagtcagcagcaatgcatagctctgaaaaaagaaaacattcaaataaagcaagaagca
gaggctgcagtggctaaaacagaagaattgcagaagcaactggaacaagcaagaattgac
tctctggaagaaataaaagctctgaagagtgaattagcaaatgctcaatgcaagcacaat
gaggatttaaaaaagctgaagatggaattggatgaacaagtgaagaaacaaatagagctg
ctggaacaggttgaatgttacaatgatagtcaaaaagaagttaaaagattacaagatgat
gtccaaagaatgaaatctacttatgaggagcaaattttgtgtctgaacaagcagttggaa
gctgtaaatgaagacaaaaacaaagaagtgacatatctgcaagaaactattaaaagcaac
tctcagtgttaccataatgaaataaaaactctgaatgaagagcttaaaaaattaaaaact
gctcatcaggaagagttgtcagaactaatgcatcagattgaaatatcatctaaagaaaat
gaagaaaagcaaaatcaaataaatcagttacagcacaatttgacagagaagaatgtccag
gatgaaatgagtgctcaggctgaccagcgtgaatatgacttggagcagctgagagaagtc
ttacataaaaatttagaaaacaagagagatgttgcagatacacaagaagaaccttgtgta
aaagcaaaaatggaggaaaaagttaggtacctggagcacagtttagaagaactccagtca
cagcatagtatactaaaagacgagttaacttatatgagcaatgtcaagataaaactggaa
gaggagatccatcgtatgaaggatgagtactttcatgagcgggaagacttggattttaag
ataaatgaattgcagcttactaaagaagattactgctgtgtaattgaaaaactaaaattg
gagcttcaagcagcaggacagcactatgaaactgttgcaaaagagcacaaattagagatt
cagactctgaaagatcaacaccagagagaaatttctgaactaaatgaaacgttattatct
ggttctgaaaaagagcagatggcattagtttttgaaatgcaggaacttagagaacaactt
gaaaagctaactcaggagaaggaagaagcagtgtccagttacaatagcctgagagaaaca
atggaaactctacaggctgagctaggtgaatctgctgggaagatcagccaggagtttgaa
tctatgaaacaacagcaagcttctgatgttagtcagctgcagcagaaactccgagctgct
ttcaatgaaagggatgttctccttgaaactgtaaatcgcctccaggaagaagtagaaaaa
ttgtcatctaatcagtcagagatagaagaacttaaatgtaaaatcgttagtcttcaggag
gacaatagcgcaatgacaagttccattgaccaaaaagagattactgtaagagaactggaa
gagaagatcgttgctcttactgatcaaaacagggatattttaaatgatttaaaatgcttg
ggtgaagagagaaaaacccttcaggaaacgtgcaagcaagaacaagttaaaattcaggaa
cttcagcaagaagtagatgttgctaaccagtgcaataatgacctgaaacaaaaggtagag
gaattaacagagagactgaatgaagctttaacttcaaagggtgaaaatactcaaatgcta
gagcaactagaaaaacagattgaatctctggtgcgtgataaagaacagctttcatctgaa
gtgtacactcttcatgaggaaaataagaaactcagtcaggaaaaaggtgaattaagtgaa
aagctaggaaggactacatctgaaaaagatagttgtttagtattgaaagagcagtctgaa
aacttagaaaagaaactacaaattatgactgcagaaaaagaccatatatcagcattactt
gaaaatgaacaagtgcacacatcccttgtaagaacacagctgtaccacctacttgagcaa
gtggggttcagcatttcagattctaatgaagaatatgactgtcttaacttgttaaaaatt
gcaaatgaatgcttgtcaaaaattaaagaagagcagtgccttgctctacaaaaggaggaa
gaagtcattagtttgcagcgagaagttgagagattagaggaagagaatgcagctcaacat
agagaacatagatcccttattcaggattttgaaaaagaaaaaaatctcttgagagaagaa
ctggaaggagtattgtctgaaaaagaagcgcttcaacacgatatccaggagctgaggaat
gccagcgaaaaaacaaggattgaaaatcaagatcttttagctaatactgaagaaattagt
caaaaacttgctctttatgaaagccaattacaagaacagcaaaaaggacctgaaaaacat
gacgacttaaatttcattctggaacaaaaggaaactgagcttagaaatgtgaaagacgaa
ctgagttctctaaagaatttaatggagacaatgactgggaaaactgatcaacagtcttca
gtagcagagcttcaagaaaaaattggggtgcttgaaaaagaatctgctgaaaaaggagag
aagctaaataaaattaaagtggttgctgtgaaagcaaaaaaagaattagatgccagccga
aaagagatgcagactctgaaggaagaattggagttggttcgatcagaaaaagatcaattg
tctgcttcaatgaaagatgtaattcaaggagctgaaagctataagaatcttttgatggaa
tacgacaagcaaggagaacagctggattctgaaaaaggcaaagcaaataatcttgaacgt
cagatagatgacctcacaagacagctacaggtgtcatctgagcagcatgatcagttgcac
tctgctaatgaagacctcctggctcgtgttgaaacactgcaaaataatgctaagctgctg
gaaactcagatactggagatacaaagagccaaagcaaagactgacaaagaactagaagct
gaaaagcttctaagagagcagaaaacaaaggaacatagtggtgctctccgagaaatagag
gagcttcagatacaacttcagaaggaaaagaaacatctgcagaaaactatgcaagagcta
gagctggccagaaaggatgctcataagagtacactgatggatatggaaatagctgattat
gaaaggctagtaaaagaacttaatcagaagattactgataaagacagcagaatagaagat
ctggagcaagaaacagggattcagaaacagaaacatgagacgctacaggaagaaataaag
tcacttcagtcaactatgcaacaggatgaggaaagaaatgccaagataaaacaactcctg
gtgaaaaccaaaaaagaactggctgattcaaaacaagctgaaaatgaccatctaatgttg
caggcatcgttgaaaggggaactggaagccagtcaacagcaagtggaagcctataagatt
caagtggctgtactgacatcagaaaagcataaagttcaggaacagctgcgaacgtcttca
gagcagcaccagcgtacgatgagtgcttgccagcaaaaaattgcaaccctgcaagaagag
tgcagagcagcccaggctgagcaagcatctgttacatcagaatttgagagctacaaagtc
cgtgttcataatgttctaaaacagcaaaagaataaatctactgctcggacagaatctgaa
ggagccaaacaagaaagggaacagttggaaatggtgatagatcaacttaaagttaagctt
caagatgctcagcataattcacagatgaatgcatctgaactccaggcattgcagtctgag
catgacaccctgctggaaagacacaataagatgcttcaagagactgttgcaaaagaagca
gaactccgtgaaaaactctgcacaatacagtctgagaacatggtcatcaaaacagaacat
gcccaggcactgagtcagctgacagcccagaatgaagctctccggaacaatttcagagat
caggtcaggaatctgcaagaagagcacaggaagacagtagagacacttcagcagcagctc
tccagagtagaagctcagctcttccaactcaagagtgaaccaagcactagaggtccagct
gttgcaaatctggcaacgaagagcttgagagagcggcggaacactgaccttcctgtgctc
gatgtgcacactgtggctagggaagagggagaaggtatggaaacaacagacacagagtct
gtgtcctcagccagcacctatgttcaatccttggagcaactgctgaactcaccagaagca
aagcctgaaccatctcagtggcaagcagatctcaccaaggatgagctgattcagaaacta
aacacaacagctaagagtgctgatcacttgaatgaattacttcgtgaatcagaagcaacc
aatgcaatcctaatggaacaaataaagcttcttaagaatgaaataagaagattggaaaga
aaccaagagagagaaaagtctgtggctaatctagaatacttgaagaatgttctattgcag
ttcatatttctgaaatcaggaagtgagaaggaacggctgctcccagtcatagacaccatg
ttgcaactcagccctgaagagaaggggaagctggttgcaattgcccaaggtgaagaagag
agtacctcacggccttctggatgggcttcgtacctccacagctggtcaggacttcgataa
DBGET
integrated database retrieval system
