Lonchura striata (white-rumped munia): 110478759
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Entry
110478759 CDS
T05897
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110478759 (SOX1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110478759 (SOX1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110478759
NCBI-ProteinID:
XP_021401278
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All DBs
Position
1:25559029..25560277
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AA seq
372 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGQTGAGGGGGGGGGGGNKANQDRVKRPMNAFMVWSRG
QRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRR
KTKTLLKKDKYSLAGGLLSAGSAGGGPAGVGVGMGVGVSPGSVGQRLESPGGTASGGYAH
MNGWANGAYPGSVAAAAAAAAMMQEAQLAYSQHPGSGGHPHHPHPHHPHHPHNPQPMHRY
DMGALQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGALGS
LVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQHYQSAS
TGVNGTVPLTHI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcccctggcggagcccaggcccccacg
aacctctcggggcagaccggagcgggaggcggcggaggcggcggcggcggcgggggaaac
aaagcgaaccaggaccgggtcaagagacccatgaacgccttcatggtgtggtcgcggggc
cagcggcggaagatggcccaggagaaccccaaaatgcacaactcggagatcagcaagcgc
ctgggggccgagtggaaagtcatgtcggaggccgagaagagaccgttcatcgacgaggcg
aagcggctgcgagcgctgcacatgaaggagcacccggattataaataccggccgcggcgg
aagaccaagaccctgctcaagaaggacaagtactcgctggccggggggctgctgagcgcc
ggctcggccgggggaggcccggccggcgtcggcgtgggcatgggcgtcggcgtcagcccg
ggcagcgtcgggcagcggctggagagccccggcggcacggccagcggcggctacgcgcac
atgaacggctgggccaacggcgcctacccgggctcggtggcggcggcggcggcggcggcg
gcgatgatgcaggaggcgcagctcgcctacagccagcacccgggcagcggggggcacccg
caccacccgcacccacatcacccgcaccacccgcacaacccgcagcccatgcaccgctac
gacatgggtgccctgcagtacagccccatctccaactcgcagggctacatgagcgcctcg
ccctcgggctacggcgccctgccctacggctcccagccccaccagaactcggctgcggcg
gcggcggcggcggcagcggcggcggccgcctcctcgggtgcgctgggtgcactgggctcg
ctggtgaagtcggagcccagcgtgagcccgcccgtcacctctcactcgcgggccccgtgc
cccggggacctgcgggagatgatcagcatgtacttaccggccggggaaggcggggatccg
gcggccgctgccgcccagagccggctccactccctgccccagcactaccagagcgccagc
acgggggtgaacggcaccgttcctttgacgcacatctga
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