Lonchura striata (white-rumped munia): 110478838
Help
Entry
110478838 CDS
T05897
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04120
Ubiquitin mediated proteolysis
lsr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110478838 (SYVN1)
04120 Ubiquitin mediated proteolysis
110478838 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110478838 (SYVN1)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110478838 (SYVN1)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110478838 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
zf-C3H2C3
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
110478838
NCBI-ProteinID:
XP_021401405
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MLCTALVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQNENPWDNKAVFMLYTELFTGLIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAVDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPPQPPPEPPAPAPAPAAQPNNF
PQGMLPPFPPGMFPFWPPVGPFPPGPGGVQAPAGTDGTAAAAGAAPGESHPESHPESLNW
YKPVLPCSPAEPAPAEDEEDAAEGSEPREGPEPPEGPDTAELRRRRLQRLGTPPH
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcacggcgctggtcatggccggcagcctggcgctcaccacggccgtggtggcc
cacgcctactacctgaagcaccagttctaccccaccgtggtgtacctgaccaaatccagc
cccagcatggccgtgttgtacatccaggccttcgtgctggtcttcctgctgggcaagttc
atgggcaaggtgttcttcgggcagctgcgcgcggccgagatggagcacctcctggagcgc
tcgtggtacgcggtgaccgagacctgcctggccttcaccgtcttcagggacgacttcagc
ccgcgcttcgtcgccctcttcaccctcctcctcttcctcaagtgcttccactggctggcc
gaggaccgtgtggattttatggagaggagccccaacatctcgtggctcttccacttccga
atcgtctccctgatgttcctgctgggaatcctggacttcctctttgtcagccacgcctac
cacagcatcctgacccgtggcgcctccgtccagctggtcttcggcttcgagtacgccatc
ctgatgaccatggtgctgaccatcttcatcaagtacgtgctgcactccgtggacctgcag
aacgagaacccctgggacaacaaggccgtgttcatgctctacaccgagctcttcaccggg
ctgatcaaggtgctgctctacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccgctcttcgccatccgccccatgtacctggccatgaggcagttcaagaaggccgtcacc
gacgccatcatgtcccgccgggccatccgcaacatgaacacgctctatcccgacgccacg
gccgaggagctgcaggccgtggacaatgtctgcatcatctgccgtgaggagatggtgacg
ggcgccaagcgcctgccctgcaaccacatcttccacaccagctgcctgcgctcctggttc
cagcggcagcagacgtgccccacgtgccgcatggacgtgctccgcgcctcgctgccgccg
cagccgcccccggagccgccggcaccggcaccggcaccggcggcgcagcccaacaacttt
ccccaggggatgctgcctcccttcccgccgggaatgttcccgttctggccgcctgtgggg
cccttcccgcctggccccggcggcgtccaggccccggccggcactgacggcacagccgcg
gccgccggcgccgctcccggtgagtcccaccccgaatcccaccccgaatccttaaactgg
tacaaaccggttctgccctgctctcccgcagagccggcccccgccgaggatgaggaggac
gcggccgaaggctccgagccccgggagggccccgagccccccgagggccccgacacggcc
gagctgcggcggcggcggctgcagaggctggggacccccccccactga
DBGET
integrated database retrieval system
