Lonchura striata (white-rumped munia): 110478856
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Entry
110478856 CDS
T05897
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03008
Ribosome biogenesis in eukaryotes
lsr03013
Nucleocytoplasmic transport
lsr03015
mRNA surveillance pathway
lsr05164
Influenza A
lsr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110478856 (NXF1)
03015 mRNA surveillance pathway
110478856 (NXF1)
03008 Ribosome biogenesis in eukaryotes
110478856 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
110478856 (NXF1)
05168 Herpes simplex virus 1 infection
110478856 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110478856 (NXF1)
03009 Ribosome biogenesis [BR:
lsr03009
]
110478856 (NXF1)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110478856 (NXF1)
mRNA cycle factors
Stress granule specific factors
110478856 (NXF1)
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
110478856 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
110478856
NCBI-ProteinID:
XP_021401423
UniProt:
A0A218UBE0
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MAEEGKGGGYSEHDDRVGGRAFPGRRRKGRGPFRGKMYSEGSPRGRPRGRARPDDDDGDV
AMAEPHDGPRGRYVPYAPRSGRLANINITVKREPGERGGGTGRDGGRRSWFKITIPYGKK
YDKSWLLSSIQNLCSVPFTPVEFHYDHNRAQFYVEDATTASALKQVSRKITDRDNYKVVI
VINSSAPPQSLQNELKPEEIEQLKLCMSKRYDGSQQALDLKSLRVDPDLVAQSIDVVLSQ
RSSMGVVLRIIEENIPELQSLNLGSNRLFRLDDLSELPLKAPRLKALDLSRNELKSEREL
DKVKGLKLQELWLDGNPLCDGFRDQASYISSIRERFPKLLRLDGHELPPPIAFDVEAPTT
LPPCKSSYFGSDDLKALVLRFLQQYYSVYDSSDRQGLLDAYHDGACCSLSIPYGPHTPPR
NSLNEYFKDSRNVKKLKDPTMRFKLLKHTRLNVVAFLNELPKTQHDVNSFVVDICAQTNT
LLCFTVHGLFKEVDGKSRDSVRAFTRMFIAVPAGNSGLCIVNDELFVRGASPEELRKAFA
LPAPTPSSSPVPTLTAEQQEMLAAFAMQSGMNLEWSQKCLQDNDWDYGQAGQVFTQLKLE
GKIPEVAFLK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggggaaggggggcgggtacagcgagcacgatgaccgcgtgggcggccgg
gcgttcccgggccggcggcggaagggccgggggccgttccgggggaagatgtacagcgag
gggagcccccggggccgcccccggggccgcgcccgccccgacgacgacgacggcgacgtc
gccatggccgagccgcacgacgggccccgcgggcggtacgtgccgtacgcgccgcgctcc
ggccgcctggccaacatcaacatcacggtgaagcgcgagcccggcgagcgcggcggcggc
accggccgcgacggcggcaggaggagctggttcaaaatcaccatcccgtacgggaagaag
tacgacaagtcctggctgctcagctccatccagaacctctgcagcgtccccttcaccccc
gtcgagttccactacgaccacaaccgggcccagttctacgtggaggacgcgaccacggcc
agcgccctcaaacaggtgtcccggaaaatcaccgacagggacaactacaaggtcgtcatc
gtcatcaactcctcggcgccgccgcagtcgctgcagaacgagctcaaacccgaggagatc
gagcagctcaagctgtgcatgagcaagcgctacgacggctcccagcaggcgctggacctc
aagagcctccgcgtggacccggacctggtggcccagagcatcgacgtggtgctgagccag
cgcagctccatgggggtggtgctgcgcatcatcgaggagaacatccccgagctgcagtcg
ctgaacctgggcagtaaccgcctgttccgcctggacgacctctccgagctgcccctcaag
gccccgcgcctcaaagcgctcgacctgtcccgcaacgagctgaagtcggagcgggagctg
gacaaggtgaaggggctgaagctgcaggagctgtggctggacgggaaccccctgtgcgac
ggcttccgcgaccaggccagctacatcagctccatcagagagaggttcccaaaactgctg
cgcctggacgggcacgagctccccccccccatcgccttcgacgtcgaggcgccgacgacg
ctgccgccctgcaagagcagctacttcggctctgacgacctcaaggctttggtgctgcgg
ttcctccagcagtattactcggtgtacgactccagtgaccggcaggggctgctggacgcg
taccacgacggcgcctgctgctcgctcagcatcccctacggcccccacaccccccccagg
aacagcctgaacgagtatttcaaggacagccggaacgtgaagaagctgaaggaccccacc
atgcgcttcaagctgctgaagcacacgcggctgaacgtggtggcgttcctgaacgagctg
cccaagacgcagcacgacgtcaactccttcgtggtggacatctgcgcgcagacgaacacg
ctgctctgcttcaccgtgcacggcctcttcaaggaagtggacgggaagtcgcgggactca
gtgcgggcgttcacgcggatgttcatcgccgtgccggccggcaacagcgggctgtgcatc
gtgaacgacgagctgttcgtgcgcggcgccagccccgaggagctgcgcaaagccttcgcc
ctgcccgcgcccacgccctcctccagccccgtgcccaccctgacggccgagcagcaggag
atgctggcggccttcgccatgcagtcgggcatgaacctcgagtggtcccagaagtgcctc
caggacaacgactgggactacggccaggccgggcaggtcttcacccagctcaagctggaa
gggaagattccggaggtcgcgtttctcaagtga
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integrated database retrieval system
