Lonchura striata (white-rumped munia): 110478969
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Entry
110478969 CDS
T05897
Symbol
NOTCH2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110478969 (NOTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
NOD
Notch
NODP
Ank_5
Ank_3
Ank_4
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
110478969
NCBI-ProteinID:
XP_021401646
LinkDB
All DBs
Position
8:869239..954029
Genome browser
AA seq
2431 aa
AA seq
DB search
MARGAGPALAALLALGLAVLRRAEPAAALQCMDDSKPCVNEGKCIPYQNGTGYCKCREGF
LGDYCQYRNPCESNTCKNGGTCEAASLIGKPTCKCAPGFTGEECQYSESHLCYVSQPCLN
GGTCHPHGQDTYECVCLPGFTGKECQWIDACTSQPCANGSTCTVSGNKFSCTCPAGYTGQ
RCETDVNECATPGLCQHGGTCVNLPGSYRCQCGLGYTGHRCESPYVPCSPSPCMNGGTCH
QTSDFAFECNCLPGFEGSVCGHNVDDCPNHKCLNGGVCVDGVNTYNCRCPPQWTGQFCTE
DVDECQLQPNACQNGGTCTNHNGGYACVCVNGWSGDDCSKNIDDCFTASCANGSTCIDRV
ASFSCICPEGKAGLLCHLDDACVSNPCQKGALCDTNPVNGNYICTCPQGHKGADCTEDVD
ECAMANSNPCEHAGKCVNTEGSFHCECLKGYTGPRCEMDINECHSNPCQNDATCLDKIGG
FTCLCMPGFKGVHCEQDIDECLSNPCVNNGVCLDKVNRFLCVCPPGFSGAVCQIDIDDCS
STPCLNGAKCIDHPNGYECQCATGFTGLLCEENINNCDPDPCHHGECQDGIDSYTCICNP
GYMGAICSEQIDECHSNPCLHQGRCIDLVNGYQCNCLLGTSGVNCENNFDDCASNPCIHG
DCIDGINRYNCACKPGFTGPRCNADIDECTSSPCHNGGTCINEVNGFRCVCPEGFHHPHC
QSQADGCLSSPCVHGNCTHIATGYKCVCDPGWIGDYCSTEGNECKSNPCQNGGTCEDLLN
GYRCTCRKGFKGVNCQVVVSPCSPNPCENSGICQESPDSEGYTCQCAPGWEGERCTVDID
ECLSKPCKNHALCHNIQGSYLCECRPGFTGGDCDSNIDDCLSNPCQNGASCVDGIDSFSC
ICLPGFHGDKCQTDTNECLSEPCRNGGTCTHYVNSYTCKCPPGFQGTNCESNVDECTDSS
CFNGGTCVDGINSFTCQCPLGFTGPFCLTEINECDSHPCLNRGTCVDSLGTYRCICPLGY
TGKNCKSLVDLCSKSPCKNRGTCVQTLAQTRCVCPPGWTGAYCDVPNVSCQVAASQRGVP
VDQLCQHSGHCLNVGNTHHCQCQVGYTGSYCEVQLDECDSSPCQNGATCRDHLGGYQCEC
VAGYQGVNCEYEVDECQFQPCQNGGTCIDLVNHFKCSCPPGTRGRFCEENVDDCASESGA
PRCFNGGQCIDQIGGYSCLCPQGFAGERCEGDINECLSNPCNPRGSLDCVQLTNDYRCIC
RSAFTGRHCESVIDVCPRRPCQNGGTCAVASNMPDGFICQCPPGYSGAKCEFSSHSTCGQ
VKCKKGEQCIQTSSGPRCYCPKLSVGEECQTHPGCASAPCQNGGSCHPHSQPPYYYCQCP
VHTQGSHCEQPVTFSPEPRRCLHSQCAEKARDGYCDEDCNTHACQWDGGDCSLTVEDPWA
NCSSSLPCWMLFNGQCDEFCNTPECLFDNFECQQNSRTCKYDKYCADHYADGRCDQGCNS
EECGWDGLDCAGDKAEKLAEGTLIIVVLMPPDELLGDVRSFLRTLGTLLHTNLRIKLDSQ
GNPMVFPYYGEKSAARSRRSLVVVRKHRELEQEVIGTKVFLEIDNRQCAEDSEQCFHNTE
AAAALLAAQAIKGMLPYPFVSVQSEPLLPPKTQLLYLLAVAALIILLILLLGVMMAKRKR
KHGSLWLPEGFILRRDPSNHKRREPVGEDAVGLKNLSVQIPEGNLADPGTTEHWAGDGGP
QPKRAKAEDQALLPEGDEQIDQRQWTQQHLEAADVCGSTSLALTPPQADQEVDVLDVNVR
GPDGCTPLMLASLRAGGSDISEDDEDGEDSSANIITDLIYQGANLQAQTDRTGEMALHLA
ARYSRADAAKRLLDAGADANARDNMGRTPLHAAVAADAQGVFQILIRNRVTDLDARMNDG
TTPLILAARLAVEGMVAELINCQADVNAVDDHGKSALHWAAAVNNVEATLVLLKNGANRD
MQDNKEETPLFLAAREGSFEAAKILLDHFANRDITDHMDRLPRDVAQDRMHHDIVQLLNE
YNVAHSPAGHPGAMLNSALSPVICGPNRSFLNLKHASLSKKSRKPNAKGMPTSLTKDAKR
RRKKSLSEGKGQFSESSVTLSPVDSLESPHAFVSEPTSSPVMPSPGVLHSSPSSLLTAPS
VQAAHTMSFSNLHEMQPLGRGSSTVLPSVSQLLSQHRTTPPNSGLGRLRPGNVSSEWMNR
MEVNESQYNEMFGMVPQVMHSHPSVSQQSGLVQADAKHLGVSRESLPPIMTFQLVPKGSI
SQQALPQQAQSNCAQNMAGPLSSMYQIPDLAQLPSASFSMAAIPQQDGQVAQTVLPAYHQ
FQSSMGKYPTPPSQHSCYSSATERTPSHNRHLQGEHPYLTPSPESPDQWSSSSPHSASDW
SDVAASPSNNQRGPAAAHMTEQQRNNMQVYA
NT seq
7296 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcggagcggggcccgcgctcgccgcgctcctcgccctggggctggccgtgctc
cgccgcgccgagcccgccgccgctctgcagtgtatggatgactccaagccgtgtgttaat
gagggaaagtgcattccatatcaaaatggtacaggatattgcaagtgtcgagaaggcttt
cttggagactactgtcagtacagaaacccctgtgagagcaatacctgtaagaacggggga
acctgtgaagctgcatccctgataggaaaaccaacctgcaagtgtgctccaggcttcaca
ggggaggaatgtcagtactcagaatctcacctctgctacgtgtcccagccctgcctgaac
ggaggcacttgtcacccccacggccaggacacgtacgagtgtgtctgtctcccaggtttc
acaggaaaagaatgccagtggattgatgcctgcacatctcaaccttgtgccaatggaagt
acatgcactgtgtctggaaataagttctcctgcacctgcccggcgggctacactggccag
aggtgcgagacggacgtgaacgaatgtgccacgccaggcctgtgccagcacggtggcacc
tgcgtcaacctgcccggctcctaccgctgccagtgcgggctgggctacacgggccaccgc
tgcgagagcccctacgtgccctgctcgccgtccccctgcatgaacgggggcacctgccac
cagaccagcgacttcgccttcgagtgcaactgcctgcccggtttcgaggggagcgtctgc
ggacacaacgtggacgactgcccgaaccacaagtgcctgaacgggggtgtttgcgtggac
ggggtgaacacctacaactgccgctgcccgccccagtggacaggccagttttgcaccgag
gatgtggatgaatgccagctccagcccaatgcctgccagaacgggggcacctgcaccaac
cacaacgggggctacgcctgcgtctgcgtcaacggctggagcggggacgactgcagcaag
aacatcgatgactgcttcactgcctcctgtgccaacggctccacctgcatcgacagggtg
gcttccttctcctgcatctgcccagagggaaaggcaggtcttctgtgccacttggatgat
gcctgtgttagcaatccatgccagaaaggtgctctttgtgacaccaaccctgtgaatgga
aactacatctgcacctgtccccaaggccataagggagcagactgcactgaggatgtggat
gaatgtgcaatggcaaacagcaatccgtgtgagcacgctgggaagtgcgtcaacaccgag
ggctctttccactgtgagtgtctgaagggctacacaggacctcgctgtgagatggacatc
aatgagtgccactccaacccgtgccagaacgatgccacctgcctggataaaattggagga
ttcacgtgtctctgtatgccaggttttaaaggagttcactgtgaacaagatattgatgaa
tgcctaagtaatccctgtgtgaacaatggagtgtgtcttgataaagtcaaccgcttcctt
tgtgtctgtcctcctggattcagtggggctgtgtgccagattgacatagacgactgttcc
agcacgccgtgtctcaatggagccaaatgcattgaccaccccaatggctacgagtgccag
tgtgccacaggttttactggccttctgtgcgaggagaacatcaacaactgtgatcccgat
ccctgccaccacggggaatgccaggatggcattgattcatacacatgcatctgcaaccct
ggctacatgggtgccatatgcagcgagcagatcgacgagtgccacagcaacccttgccta
catcaagggcgctgcatcgacctggtcaatggctaccagtgcaactgcttgctgggcacc
tcaggagtaaactgtgagaataactttgacgactgtgccagtaacccgtgcattcatggg
gactgtattgatggcattaatcgctacaactgcgcctgcaaacctggattcacaggcccc
cgctgtaatgcggacatcgacgagtgcacgtccagcccctgccacaacggcggcacgtgt
atcaacgaggtgaacggctttcggtgtgtgtgccccgagggtttccaccacccccactgc
cagtcccaggctgatggctgcctcagcagcccctgtgtgcatggcaactgcacacacatt
gccactgggtacaagtgtgtctgcgacccaggctggataggagattactgttcaacagaa
gggaatgaatgtaaatcaaacccatgccagaatggaggaacttgtgaggatctgttgaat
ggatacagatgtacctgtagaaagggattcaaaggtgtgaactgccaggtggtggtttct
ccttgttcccctaatccttgtgagaactcgggaatctgccaagaatctcctgactctgaa
ggctacacctgccaatgtgcccctggctgggaaggggaaagatgcacggtggatattgat
gagtgtctctccaagccctgcaagaaccatgccctgtgccacaacatccagggcagttac
ctgtgcgagtgccggcctggcttcaccggaggggactgtgacagcaacattgatgactgc
ctgtcaaatccctgccagaacggagcctcgtgcgtggatgggatcgactccttctcgtgc
atctgcctgcccggctttcacggggataaatgtcagacagacaccaacgagtgtctgagc
gagccctgcaggaacgggggcacctgcacccactacgtcaacagctacacctgcaagtgc
ccgccgggcttccagggaaccaactgcgagagcaacgtcgacgagtgcaccgacagctcc
tgtttcaatggaggcacttgtgtggatggaatcaattccttcacctgccagtgccccctg
ggcttcacgggacccttctgcctgacagaaatcaacgagtgtgactcccatccctgcctc
aacaggggcacctgcgtggacagcctgggcacatacaggtgtatatgtcccttgggctac
actggcaagaactgcaagtctctcgtggatctgtgcagcaagtctccctgtaagaacaga
ggcacgtgtgtgcagactctggcccagactcggtgtgtgtgcccgcccggctggaccggc
gcctactgcgacgtgcccaacgtctcctgccaggtggcagcttcacagagaggagtccct
gtggaccagctgtgccagcactcgggtcactgcctcaacgtgggcaacacccaccactgc
cagtgccaggtgggttacacgggcagctactgcgaggtgcagctggatgagtgcgactcc
agcccctgccagaacggagccacctgccgggaccacctgggcggataccagtgcgagtgt
gtggctggataccagggtgtcaactgtgagtacgaggtggatgagtgccagttccagccc
tgccagaatggaggcacctgcatcgacctggtcaatcacttcaagtgctcctgcccacca
ggaactcggggccgcttctgtgaggagaacgtggatgactgcgcctcggagtcgggagct
ccgcgctgcttcaacgggggccagtgcattgaccagatcgggggctacagctgcctctgc
ccccagggcttcgcaggagagcgctgcgagggggacatcaacgagtgcctctccaacccc
tgcaaccctcgagggagcctggactgtgtccagctgacaaatgattacaggtgcatctgc
cgtagtgctttcactggccggcactgtgagagtgtcatcgacgtgtgtccccggaggccg
tgccagaacggcggcacctgcgctgtggccagcaacatgcccgatggcttcatctgccag
tgccccccgggttattctggagcaaaatgtgagttcagcagccacagcacttgtggacaa
gtgaaatgcaagaagggggagcagtgcatccaaacgtcttctggtccacggtgctattgc
cccaagctgtctgtgggagaggaatgccagacacacccaggctgtgccagtgccccctgc
cagaatgggggcagctgccaccctcattctcagcctccttactattactgccagtgccct
gttcacacccagggcagccactgtgagcagcccgtaactttcagcccggagcctcgaaga
tgcctgcattcccagtgtgcagaaaaagccagggatggctattgtgatgaagactgtaac
acccatgcgtgccagtgggatggaggcgactgctccctgacagtggaggatccttgggcc
aactgctcctcctccctgccctgctggatgcttttcaatggacagtgtgacgagttctgc
aacacacccgagtgcctgttcgacaactttgagtgtcagcaaaatagcaggacatgcaag
tatgacaagtactgtgcagatcactacgcagacgggcgctgcgaccagggctgcaacagc
gaggagtgcggctgggacggcctggactgcgccggcgacaaggccgagaagctggcagag
ggcaccctgatcatcgtggtcctgatgccccccgacgagctgctgggggacgtccgcagc
ttcctgcgcaccctgggaacgctcctgcacaccaatctgaggattaagctggactcccag
ggaaaccccatggtgttcccctactatggggagaaatcggcagcgcggagccgtcggtcg
ctcgtggtggttcgcaagcacagagagctggagcaagaggtcattggcaccaaggtgttc
ctggagatcgacaaccgccagtgtgcagaggactcggagcaatgctttcacaacacagaa
gctgctgcagctctcttagctgctcaggccatcaagggcatgttgccctatccgtttgtg
tctgtccaaagtgagcccttgttaccaccaaagacccagctgctttacctgcttgccgtg
gcagctttgatcatcctgctgatccttctcctgggtgtgatgatggccaagcgcaagcgc
aagcacggctctctgtggctcccagagggcttcatcctgcgcagggatcccagtaaccac
aaacgcagagagcccgtaggggaggatgctgttggactcaaaaatctgtcagtccagata
ccagagggtaacctggccgaccctgggacaactgagcactgggcaggtgatggtggacct
cagccaaagagagctaaggctgaggaccaggccttgctgccagaaggagatgagcagatt
gaccagcgccagtggacccagcagcacctggaggcagcagatgtctgtggcagcacctcc
ctggccctcacacccccccaggcagatcaagaagtggatgttctggatgtcaacgtcaga
gggccagatggctgcactcctctgatgttggcatctctgcgtgccggcggctccgacatc
agcgaggatgacgaggatggggaagactcctcagcaaacatcatcacggatctgatctac
cagggggccaacctgcaggcgcagacagaccgcaccggggagatggctctgcacctggca
gcccgatactccagagccgacgctgccaagcggctcctggacgccggggcggatgccaat
gctcgggacaacatgggacggacccctctgcacgcagccgtggctgccgacgcccagggg
gtcttccagatcctgattcgtaacagagtgacagacttggatgctcggatgaatgatggg
acgaccccgttaattctggctgcacgtctggctgtggaagggatggtggccgagctcatt
aattgccaggctgatgtgaacgccgtggatgaccacggtaaatctgctcttcactgggct
gctgctgttaacaatgtggaagcaacactagtactgctgaaaaatggagccaacagagac
atgcaggataacaaggaggagactccactcttccttgctgctcgggaaggcagctttgaa
gcagcaaaaatcttgctggatcattttgccaaccgagatatcacggaccacatggaccgg
ctgccccgggacgtggcccaggaccggatgcaccacgacatcgtgcagctcctcaatgag
tacaatgtggcccacagccctgccgggcaccccggggccatgctgaactctgccctctcc
ccggtcatctgcggccccaacaggtctttcctcaacctgaaacacgcgtcactaagcaag
aagtcacgaaaaccgaatgccaaaggcatgcccaccagcctcaccaaagatgcaaagagg
agaaggaagaagtccctcagtgagggcaaagggcaattttcagagagctccgtgaccctg
tcaccagtggattccctggagtctccccatgcttttgtatctgaaccaacctcttctcct
gtgatgccatcaccgggggtgctgcactcttcgcccagctcgctgctgacggctccgtcg
gtgcaggctgcacacaccatgtccttctccaacctccacgagatgcagcccctggggcgt
gggtccagcacggtgctcccatccgtcagccagctgctctcgcagcacagaaccacccct
cccaacagcgggctgggcaggctgcggccaggcaacgtctccagcgagtggatgaaccgc
atggaggtgaatgagtcccagtacaacgagatgtttggcatggtgccccaggtgatgcat
tcccaccccagcgtttctcagcagagtggcttggttcaagcagatgcgaagcacctgggg
gtgtccagggagtctttgccccccatcatgaccttccagctggttcccaagggcagcata
agccagcaagcactgccgcagcaggcccagtcaaactgcgctcagaacatggctggccct
cttagctccatgtaccagatcccagatctagcccagctgcccagcgcctcgttctccatg
gctgccatccctcagcaggacggccaggtggctcagacggtcctcccggcctaccaccag
ttccagagctcgatggggaagtaccccacgcctccctcccagcacagctgctactcctcg
gccacagaacggactcctagccacaaccggcacttacaaggggagcacccgtacctgact
ccgtcgcccgaatctccggaccagtggtcgagctcttccccacactctgcctctgactgg
tctgacgtggcagccagtcccagtaacaaccagcgcgggccagcagccgcccacatgacg
gagcagcagcggaacaacatgcaggtgtacgcctga
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