Lonchura striata (white-rumped munia): 110479085
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Entry
110479085 CDS
T05897
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00310
Lysine degradation
lsr00514
Other types of O-glycan biosynthesis
lsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110479085
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
110479085
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lsr01003
]
110479085
Enzymes [BR:
lsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
110479085
Glycosyltransferases [BR:
lsr01003
]
O-Glycan biosynthesis
O-linked Gal type
110479085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
DUF6492
Motif
Other DBs
NCBI-GeneID:
110479085
NCBI-ProteinID:
XP_031363684
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MALWVAADHSVDNTSAVLAAWLGRVRGRYHRVLWRHQEQPTSFPDEEGPKHWSPSRYEHL
MRLRQEALEAARAMWADYLLFLDADNVLVNPDTLAVLVAENRTVVAPMLDSRAAYSNFWC
GATAQGYYRRTADYLPIRRRERRGCFAVPMVHSTFLLDLRRERSRLLAFHPPPPGYTGPF
DDILVFAAACRHAGVQMFVSNREQFGFLPVPLRSQSSLRDEAENFLHVQLEIMVKLPPAE
PSPHVWVPPKVLDKLGFDEVFLINLRRRPDRRARMLRTLQELGVSPKLVEAVDGRALNSS
QAEALGVRMLPGYRDPFHGRPLTRGEVGCFLSHFRVWQEISARGLRRSLVLEDDLRFEVF
FRSRLEELMEQLEQAAIDWDLVYLGRKRLEPERAERGVPGVRQLLRPGYSYWSLGYALSL
RGARKLLAAEPLGKMIPVDEFLPLMFDRHPSPEYSRHFSRRDLRAFSAEPLLLFPTHYTG
EPGYVSDTETRRREFPPESRNSQPQSPPEPPEIWDGEEFLWESQNSQPQQESDAHEEL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtgggtggccgctgaccacagcgtggacaacacctcggccgtgctggcggcg
tggctgggccgcgtgcggggccgctaccaccgcgtgctctggaggcaccaggagcagccc
acgtccttccccgacgaggagggccccaagcactggagcccctctcgctacgagcacctg
atgaggctgcgccaggaggccctggaggccgcccgggccatgtgggccgactacctgctg
ttcctggacgcggacaacgtcctggtgaacccggacacgctggccgtgctggtggccgag
aacagaaccgtggtggcgccgatgctggactcgcgcgccgcctactccaacttctggtgc
ggcgccaccgcgcagggctattaccgccgcacggccgactacctgccgatccggcgccgg
gagcgccggggctgcttcgcggtgccgatggttcactccaccttcctgctggacctgcgc
cgggagcgctcgcggctcttggccttccacccgccgccgcccggctacaccggccccttc
gacgacatcctcgtcttcgccgccgcctgccggcacgccggggtgcagatgttcgtgtcc
aaccgggagcagttcgggttcctgccggtgccgctgcgctcccagagctccctgcgggac
gaggccgagaacttcctgcacgtccagctggagatcatggtgaagctccctccggccgag
ccctccccccacgtgtgggtccctcccaaggtcttggacaaactgggattcgatgaggtg
ttcctgatcaacctgcggcgccggccggaccgccgggcgcggatgctgcgcacgctgcag
gaactgggggtctcccccaagctggtggaggccgtggacggccgggccctgaacagcagc
caggcggaggcgctgggggtgcggatgctgccgggctaccgggaccccttccacgggaga
cccctgacccgcggcgaggtcggctgcttcctcagccacttccgcgtctggcaggagatt
tcggcgcggggcctgcggcgctcgctggtgctggaggacgatctgcgcttcgaggttttc
ttccgcagccgcctggaggagctgatggagcagctggagcaggcggccatcgactgggac
ctcgtctacctgggccggaagcggctggagccggagcgcgccgagcgcggcgtgccgggc
gtgcggcagctgctgcggccgggctactcctactggagcctgggctacgcgctgtcgctg
cgcggcgcccgcaagctcctggccgccgagcccctgggcaagatgatcccggtggacgag
ttcctgcccctcatgttcgaccggcaccccagccccgagtattcccggcacttttcccgg
cgggacctgcgggcgttctcggcggagccgctgctgctcttccccacgcactacacgggc
gagcccggctacgtcagcgacaccgagacccggcgccgggaattcccgccggaatcccgg
aattcccaaccccagagccccccggagccccccgaaatctgggatggggaggaattcctg
tgggaatcccaaaattcccagccccagcaggagagcgacgcccacgaggagctttga
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