Lonchura striata (white-rumped munia): 110479208
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Entry
110479208 CDS
T05897
Symbol
GDF5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04060
Cytokine-cytokine receptor interaction
lsr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
110479208 (GDF5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110479208 (GDF5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lsr04052
]
110479208 (GDF5)
Cytokines and neuropeptides [BR:
lsr04052
]
Cytokines
Transforming growth factors (RSTK binding)
110479208 (GDF5)
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
RBD_ZCCHC3_2nd
Motif
Other DBs
NCBI-GeneID:
110479208
NCBI-ProteinID:
XP_021401969
UniProt:
A0A218UB34
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Position
20:9611200..9614285
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AA seq
500 aa
AA seq
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MKILHFLTLLLWHLTWLSLDLVPGVLSNSEAGQGNPGSKLGFLKAEGKERNPSARAGTLR
TSSHGYSAGTSKARTKSSAAQAGALLAKNDDSKKVPSRTAAAEGKVGHLPSRPSGVRTVT
PKVQNLSSKVALKKTGTSSTDTDSFKTKKTKEPVTQREAKETFRHPPITPHEYMLSLYRT
LSDAERKGVNGSVKLEAGLANTITSFIDKGQDERAPTIRKQKYIFDISALEKDGLLGAEL
RILRKKPSDTWKSHSSGKTSQVKLFSCSTNRQASTLLDSRTVSITDTPKWEVFDIWKLFR
NFKNLVNLCFELETFDRGRAVDLRSVGFNRTGRQVNEKALFLVFGRTKKRDLFFNEIKAR
SGQDDKTVYEYLFNQRRKRRAPLATRQGKRPTKNLKARCSRKALHVNFKDMGWDDWIIAP
LEYEAYHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDS
ANNVVYKQYEDMVVESCGCR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgcattttctcactttactgctttggcatttgacttggctgtctctggat
ctagttcctggagtgctgagtaattctgaagcaggccagggtaatccaggatctaaatta
ggttttttgaaagcagaaggaaaggagaggaatccctccgcacgagcaggtacattgagg
acttcaagccatggatacagtgctgggacctcaaaggccaggactaaaagcagtgctgct
caggctggagctctgctggccaagaatgatgactcaaagaaggttccctcaagaacagca
gctgcagagggcaaggtaggacatctccccagcagaccttctggagtaaggacagtgact
ccaaaggttcaaaatcttagcagcaaggtggctttgaaaaaaactggcacaagcagtact
gacactgattctttcaaaaccaaaaagactaaagagcctgtaacccagagggaagctaag
gaaactttccgacatcccccaataacgccacatgaatacatgctctctttgtacaggact
ctctcagatgcagaaagaaagggtgttaatggaagtgtaaaactggaggctggacttgcc
aatacaataaccagctttatagacaaaggacaagatgagcgagcaccaactatacgaaaa
caaaaatatatttttgacatcagtgcattagaaaaagatggattgctgggagcagagctt
cgaatactgagaaaaaaaccttctgatacatggaagtctcattcttctgggaaaacttcc
caagtaaaattatttagttgctctacaaacagacaagcctcaacactcttggactctcgg
actgtcagcatcaccgatacacccaagtgggaagtgtttgacatctggaaacttttcaga
aactttaaaaacttggttaacttgtgttttgaactggaaacttttgacagggggagagct
gttgatctcaggagtgtgggatttaatagaacaggaagacaggtcaatgaaaaggctctg
ttcttggtgtttgggaggacgaaaaaaagagacttattcttcaatgaaatcaaagctagg
tctggccaagatgacaaaactgtttatgagtacttattcaaccagaggcggaagagaaga
gctcctctagcaacacggcaagggaagaggcccaccaagaacctgaaggcgaggtgtagc
agaaaagccctccacgtgaattttaaggatatgggctgggatgactggataatagcccct
ctggagtatgaggcgtatcactgcgaagggctctgtgaattccccctccgatcccacctg
gagcccaccaaccacgcagttatccagacattaatgaactccatggaccccgagtccacc
cccccgacttgctgtgtcccaacccggctgagccccatcagcatccttttcattgactct
gcaaacaacgtggtctacaagcagtacgaggacatggtggtggagtcctgtggctgtagg
tag
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