Lonchura striata (white-rumped munia): 110479366
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Entry
110479366 CDS
T05897
Symbol
ZBED1
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110479366 (ZBED1)
04121 Ubiquitin system [BR:
lsr04121
]
110479366 (ZBED1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
110479366 (ZBED1)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110479366 (ZBED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
hAT-like_RNase-H
PRRSV-NSP11_N
Motif
Other DBs
NCBI-GeneID:
110479366
NCBI-ProteinID:
XP_021402307
LinkDB
All DBs
Position
1:complement(35010523..35022554)
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AA seq
695 aa
AA seq
DB search
MENKSLEGSPSDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPDEFCEFVKSNTEQMREAFATAFSKIKPESSQQVVQDSLIMKTYQNYEN
KKHQELTSAVISLICEGMYPASIVDEPTFKALLRTADPRYELPSRKYFCTKAIPEKYSAI
REIVLKELTEVLWCGISTDMWRSENQNRSYVTVAVHFLSSGPANCLAVNSRCLKTFEVPE
DNTAETITRVLYETFIEWGINTKVFGATTDYSKDIVKACSLLDIPVQMPCLGHSFNAGIQ
QAFQLPKLCNLLARCRKLVEYFQQSTVAMYMLSEKQKQQNILHCMLVSDRVSWWGSTLAM
LQRLKEQQFVIAAVLVEDSNNHHLMLESSEWNTIEGLVELLQPFKQVAEMMSASKYPTIS
MVKPLLHMLLNTTLNIKENDLKEISMAKEVIAKELSTTYQHTPEIDMFLNVATFLDPRYK
KLPFLSAFERQQVENRVVEEAKSLLEKVKENSFRTEEKFFTVSEEPPMKKIIISSTPPPT
SVINNMLAEIFCQTGGVEDQEEWHAQILEELSNFKSQKVLGLNEDPLKWWSDRLALFPVL
PKVLQKYWCILATRVFPERLFGSSANVVSAKRNRLAPAHVDEQIFLYENSRNGSEAEPED
EDEGEWGLEQEQIFNLNDSVNINNSFFNIRDSGFV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagaataaaagtttagaaggttccccatcagacctaaagttagtggctcacccgaga
gcaaagagtaaagtgtggaagtactttgggtttgataccaatgcagaaggatgcatatta
cagtggaagaagatctactgccgtatttgcatggcacagattgcctattcgggaaataca
tccaacctttcctaccaccttgagaaaaaccaccctgatgaattctgtgagtttgtgaaa
agtaacactgagcaaatgagggaagcctttgccacagcattttcaaaaatcaagccggag
tcatcgcagcaggttgttcaagatagcctcatcatgaagacctaccagaactacgaaaac
aaaaaacatcaggaactgacatctgcagtcatcagcttaatttgcgagggcatgtatcca
gcctccattgttgatgaacctaccttcaaggccctcttgagaacagcggatcccaggtat
gaacttccaagccggaagtacttctgtacaaaagcaattcctgaaaagtacagtgctatt
agagaaattgtgctgaaagagctcactgaggttctgtggtgtggcatatccacagacatg
tggaggagtgaaaaccagaacaggtcatatgtaactgtggcagttcactttctcagcagc
ggtcctgccaactgcctggctgtgaactcacggtgtttgaaaacattcgaagtaccagag
gataacactgcagagaccattacaagagtcctttacgaaacattcattgagtgggggatc
aatacaaaagtctttggtgctacaacagattacagtaaagacattgtaaaagcttgctct
ctcttagatattcccgtacagatgccttgtttgggtcactcttttaacgcaggaatacaa
caagcttttcagctccccaaactgtgcaaccttcttgccaggtgccgaaagctggtggag
tattttcagcagtctacggttgcaatgtacatgctgagtgaaaagcagaagcagcaaaat
attctccactgcatgctggtaagtgaccgtgtttcctggtggggaagcacgcttgctatg
ctgcagcgcctcaaggagcagcagtttgtcattgcagctgttctcgtggaggacagcaac
aaccaccacctcatgctggaatccagtgagtggaatacaatcgaggggctggtggagctg
ctccagcctttcaagcaggttgcagagatgatgtctgcttcaaagtacccgacgataagt
atggtgaagccacttctccacatgcttctgaataccactctgaacatcaaagagaacgat
ttgaaagaaatcagcatggcaaaggaggtgattgctaaagagttgtcaaccacctaccag
cacacaccggagatagacatgtttctcaatgttgcaactttcttggatccccgctacaaa
aaactaccttttctttcagcctttgagaggcagcaagtggaaaacagagtggtggaagaa
gcaaaaagcctgctggagaaagtaaaagaaaatagttttagaactgaggagaaatttttc
actgtttctgaagagccccctatgaaaaaaatcatcatctcctctactcctcctcctacc
agtgtcatcaacaacatgctcgcagagatcttttgccagacaggaggcgtggaagaccag
gaggaatggcatgctcaaatccttgaggaattgagcaacttcaagtcacaaaaggtcctc
ggtttgaatgaagacccgttgaagtggtggtctgacagattagcactgtttccagtttta
ccaaaggttcttcaaaaatactggtgtattctggccacaagggtcttccctgaacgcctt
tttggttcttctgctaatgttgtgagtgcaaagagaaaccggttagccccggctcatgtg
gatgagcagatctttttgtatgaaaacagtcgcaatgggtctgaggcagaaccggaggac
gaagatgaaggagagtggggtttggaacaggaacagatctttaatttaaatgactcggta
aacataaacaacagtttctttaatattcgagacagtgggtttgtttaa
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