Lonchura striata (white-rumped munia): 110479395
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Entry
110479395 CDS
T05897
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110479395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110479395
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
110479395
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
110479395
NCBI-ProteinID:
XP_021402353
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Position
1:33667063..33726725
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AA seq
1190 aa
AA seq
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MIAEPTAASNLPSQKENAVHDEPVLESAAQNGTYVRNGNLKTPREKRKVRKQCENIRGNS
TPSRRASQLQNGEVVEAVTLFEVVSMGKQAMQSVVVDWVEAYKQDRNVALLDLINFFIQC
SGCQGMVTAEMFQSLYKKDVMQKMTETFDKETGLQYKKFMAYPWILTVTWPVDMDNEDYP
LIRTGPYWKKFKANFCEFIAVLVQQCQCSILYDNYLMDTIISLLTGLADSMVRAFRHTST
LAAMKLLTAIVSIHLNLDISKHNAQRLYEVEKKRLGGKRTSYRLDQLERKRKEYEHKLLE
IQNMMNAIFKGTFLNRYRDVIPEIRATCIEEIGSWIKMSPDAFLNDSYLKYVGWMLYDKQ
AEVRLKCLLGLQGIYSRKELVSRMDLFTNRFKDRIVSMPLDKDHEVAVQAMKLLMLMSQN
CEDVLSAEDCEMLYQFVYTTHRPLAVAAGEFLYKRLLSHEGDKKVQPEGGGKFGASTDQL
KRLIHFFLKGELHKHVTYLVDSLWDWASKFLKDWECMTSLLLKNEEVGEALSDAQESVLI
EIILATVREAAEGHPPVGRGAAKKILSVKEKKIQLEDCTKITEHFIMVLPQLLAKYSTDA
QKVASLLQIPQYYDLDVYSTGHLEKHLDDLLKEIKDIVAKHSDMSVLEASSRTYYILCRE
EIAIYSQVDCARTQMIDELMKQLNQLLDCFWQKEGGFCTDAGEISQMHSTLRRVAAFHNA
HDLTKWNLYDKTLRFLVFETEHGTLPVLIILPALQCTYFSLLWQLAAVSEHSPKETLFPL
RKQLRHFSQICTCFLHHKEKDVREKAFMILCDWLLILSHLYSNNEEAVGLLGYLPNTQLQ
EKLFSFIQEHVFMDGEEEKKDLTEEGKDETCKLDDLHKKRSLLAAYCKLIVYNVVEMTAA
AEIYKYYVKTYSDFGDIIKETLSKTRCNNKIQSAKTLILCLQQLFQTHAESQDSSNGVDF
SSPSFANIKELARRFSLTFGWDQVKSRESIAMIHKEGIEFAFQGTTGVDGKCLHPNLSFL
LIISEFSNKLLKPDKRLVYSYLQRYITEPLSCRRDKWQPLVWYRNSLLANEDEESSVLGS
LGEWHPVGSSKTSSFKRKLSNGSLPETSQTEAESKAPEQQCASQLPSAAGKSRKRLKSKE
MRLQEHLPFLCPGGLRRRYCKDEVKTEDVSEEGPEDTVEDVDVIGTDQDS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgatagccgagcccaccgcagccagtaaccttcccagccaaaaagagaatgctgtccat
gatgagccagtgctcgagtctgctgcgcagaatggtacatatgtgagaaatggcaacctg
aaaacaccaagagagaagcggaaggtcagaaagcagtgtgaaaacataagggggaattct
actcctagcagaagagcgagccagctacagaatggagaagtggttgaggcagttaccttg
tttgaagtggttagcatggggaagcaggccatgcagtctgtggtagttgactgggttgaa
gcttataaacaagacaggaatgtggcacttctggatctcatcaacttcttcattcagtgc
tcaggctgtcaaggcatggtaacagcagagatgtttcaaagtttgtacaagaaggatgta
atgcaaaaaatgacagagacctttgataaggaaactgggttgcagtataagaaattcatg
gcctatccttggatcctaacagttacttggccggtggacatggacaatgaagactaccca
ctgatcagaacaggaccctattggaagaagttcaaggccaatttctgtgaattcattgca
gtgcttgtccagcagtgccagtgcagcatcctgtatgataactacttgatggacaccatc
atctcactgcttacagggttagcagattccatggtcagagcattcaggcacacaagcact
ttggcagcaatgaaacttctgacagcaattgtaagcatccatctgaaccttgatatcagc
aaacacaatgctcaaagactgtatgaggtggagaagaagaggctaggtggcaagaggacc
agttacagacttgatcagctagagagaaaaaggaaagagtatgagcataaacttctagag
atacagaacatgatgaatgctattttcaaagggacatttctaaaccgttaccgtgatgtt
atccctgagatcagagcaacttgcattgaagaaattggcagctggattaaaatgtcccca
gatgcttttttgaatgatagctacttaaaatatgttgggtggatgctgtatgataagcaa
gctgaagtgcggttgaagtgtctgctgggactgcagggaatttatagtagaaaagaactt
gtttccaggatggatctctttactaacagattcaaggatcgaattgtgtccatgcctctg
gacaaggaccatgaagtagcagttcaagccatgaaactcttgatgcttatgtcacagaac
tgtgaggatgtgttatcagctgaagactgtgaaatgctataccagtttgtttataccact
caccgtccacttgcagtagcagctggggaattcctttataaaaggctgcttagtcatgag
ggagataaaaaagttcagcccgaaggaggaggaaagtttggggcaagcactgaccaattg
aaaagattaatacactttttcctgaagggtgagctacacaaacatgttacatatctagta
gacagcctgtgggactgggcaagcaaattcctgaaggactgggagtgcatgacctctctt
ctattaaaaaatgaagaagttggagaagcactgagcgatgcccaggaaagtgttctcatc
gaaatcatcctcgcaacagtcagagaagcagctgaaggtcatcctccagtgggcagaggt
gcagccaaaaaaattttgtcagtaaaagagaagaaaatccaattggaagattgcacaaaa
attaccgaacactttattatggtgcttcctcagctcttggcaaagtattcaacagatgct
caaaaagtggcaagtcttctgcagattcctcagtattatgatttagatgtttacagtaca
ggacatctggagaagcatttggatgatttgctgaaagagataaaagacattgtggccaaa
cactctgacatgtctgtcctcgaggcttcctccaggacttattatatcctttgccgtgaa
gaaattgccatctatagccaggtggattgtgctcgaactcaaatgatagatgagttgatg
aaacagcttaaccagctactagattgcttctggcaaaaggaaggaggattttgtacggac
gcaggagaaatttcccagatgcactctactttgagaagagtagcagcttttcataatgcc
catgatctcaccaagtggaatctgtatgacaagactttaaggttcctggtgtttgaaaca
gaacatggcacattgcctgttctgattatcctaccggctctccagtgcacatatttttct
ctcctgtggcaactagctgcagtttcggaacattctcccaaggagactctatttccacta
agaaagcagctgagacatttcagtcagatttgcacatgctttctccaccataaggaaaaa
gatgtaagagaaaaggccttcatgatactctgtgactggttgctgattctgagtcacctg
tattcaaataatgaagaagcagttggacttctaggttatcttcctaacacacagcttcag
gaaaaactgttttcatttatccaggaacacgttttcatggatggagaagaggaaaaaaaa
gatctgacagaagagggaaaggatgaaacttgcaaacttgatgacttgcacaaaaagcgg
agtcttctggcagcatattgcaagttaatagtgtataatgtggtagagatgactgcagct
gctgagatctataagtattatgtgaagacctacagtgattttggagacataattaaagaa
acattaagcaagacgaggtgcaataacaaaattcagagtgccaagacactgattctctgt
ctgcagcagctgtttcagacacatgcagaaagccaagacagcagtaatggtgtggacttc
tcctctccttcctttgcaaacatcaaagaacttgctcgtcgcttttcactaacatttggc
tgggaccaagtgaaatctagagaatctatagccatgatacacaaggaagggattgaattt
gcttttcaaggaactactggagtagatggaaaatgcttgcatcctaacttgagctttctg
ttaatcatcagtgaattttccaacaagctgctaaagccagacaaaagactagtgtacagt
tacttacagaggtacataacagagccactgtcctgcagaagagacaaatggcagcctttg
gtctggtacagaaactctttattggcaaatgaagatgaggagagctctgtccttggcagt
ttgggagagtggcaccctgtgggctcatctaagacatcttcttttaaaaggaaattgtct
aatgggtctttgcctgaaaccagccagactgaagcagaaagcaaagccccagaacagcag
tgtgcttctcagcttccctctgcagcagggaaaagcagaaagaggctgaaatctaaagag
atgcgcttgcaggaacatttgccattcctttgtccaggagggttgcgtagaagatactgc
aaagatgaggttaagacagaagatgtctccgaggagggtccagaagacacagttgaagat
gttgatgtcattggtacagaccaggacagttaa
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