Lonchura striata (white-rumped munia): 110479543 Help Entry 110479543         CDS       T05897                                  Symbol PALB2 Name (RefSeq) partner and localizer of BRCA2   KO K10897   partner and localizer of BRCA2 Organism lsr  Lonchura striata (white-rumped munia) Pathway lsr03440   Homologous recombination lsr03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:lsr00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     110479543 (PALB2)    03460 Fanconi anemia pathway     110479543 (PALB2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:lsr03400]     110479543 (PALB2) DNA repair and recombination proteins [BR:lsr03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA complex      110479543 (PALB2)    FA (Fanconi anemia) pathway     Downstream FA components      110479543 (PALB2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PALB2_WD40 Motif Other DBs NCBI-GeneID:  110479543 NCBI-ProteinID:  XP_021402597 LinkDB All DBs Position 14:complement(13451658..13460879) Genome browser AA seq 1372 aa AA seqDB search MEAPRAALSGADREKLREKLALLRREYSETVTRLRRARRAERARSHGRRERSGSCRQSRV DHPAPGPADPHRAPLSPRPHAVPHTPTQPLPWAEPRCAVTSALLPSSPGLQCSDPDCSRD NTSPSADRGEPSQLQTKTCSEDDTEKTTSVTVKHVPELSGDEVSPQDSSRAESFQASQEN VRCEIIRPVPMEKEPQTSRGMMKLRRRTKALESKERESVHDVHLTSAGEVMKNQTASAEE LQSPVFRHSSLSYTEEPAQRAAGAVLVQGERNSFTPDAASGLVQDVFESSVTAGEPELSP HALMDSRDVWQPESSRAVATPDRHEPCSQHGDSVLLDPRGDGREESPSTKKQPEGQSLCE DPGELHGLLDLMSENEILPDSRNNTITEESKNHEGHQSDTNTLNPCPADKALDSAEEQLE CQQLEIESRLSPADKALAPEGTLSSCTVVEGLLFPVEYYVRTTRRMSSCQRKVDLDAVIL SQLGRSKKGQRSKCKQKDANPNQSSQERNKGDLEPGVGPFPFLGVEDDQANSSSSQKSLP ASSSSSSTSLESISQKSITSTRQEQRQSQRKQKGRRKSACKAPMHPVSQELIESQDPTAA NESSALLSNENQSEKENCDANLERSSSDERRLSGAAALGSAGTGVTGATPAAGPDPPAGR SQVPGKCHKAPLERVQNPLHSSNSPNPGSATCASRVGDVDASAPVCQGENHPVRRVKRQR GAEQLPGVSVPLRRSLRCSARHRPQAGSTDESSRGCSSPMGSQGAAALGLPAVDLDTCGS LFSFRSLQWLVPKLGIRDFHLPNEEFGVLKLEKLKSSPVNDLEDFVSGDGVAPEDTPDAQ MKPKEKSLRSNLLLPCKTGLPELPCLENPTSKKELSTHELLFTPMGTVLAEAPTHPEISS SILPFVGATPGVSPSVHTEVFPDKPSVPALPVTSPSPRGAAALVLGDVAHRDPAVPLHPD SCAAGAASNQEEQGTALPSAAERGPEKESDETVSLEKHQQPENKEQESCRASPEQRRDAA EPLTPVLPDGPREESLQFVSELKDPSCSVDVSAVWWAAAGGRELRVVTASESAVSLWEPR APCCWARVHTWHLREIPVIQIVPLPDTCNLVCVALGELEIGEIRLLLYSSETDSFKHSLV KTGNIKAVVGLKDWRLVSSSKTMQEQQVEMVSLSETGGSKDRQTLMPPEETVTAFAEVEG MREALVGTTAGNSIVVWNLKTGQLLRNMHVGYSYPAFICHRAYSDSGLLFVVLSHPHAKE SESCGSPAFRVVAFNPRTGRSAGVMFSCLPPGLAGRYLEGDVWDTAGAAVLTSGAVAVWD LLQGGCTAVLPPGPAGRWALARWAAGGAVLLAGRRDGAVQLYRYRPPQPGAA NT seq 4119 nt NT seq  +upstreamnt  +downstreamnt atggaggccccgcgggcggcgctgagcggcgccgacagggagaagctgcgggagaagctg gcgctgctgaggcgggagtacagcgagaccgtcacccggctgcggcgggcgcggcgagcc gagcgagccaggagccacggccggagggagcggagcgggagctgcaggcagagccgcgtg gaccatcctgcacccggccctgctgaccctcaccgggccccgctgtcccctcggccacat gcagtgccccacacccccacacagcccttgccctgggctgagccgaggtgtgcagtaaca tctgctctgcttccctcctcaccaggtctgcagtgctccgatcctgactgttctagagat aacacatctcctagtgctgacagaggtgagccctctcagttacagactaaaacctgctct gaagatgacacagagaagacaacatctgtcacagttaagcatgttccagagctctccggt gatgaggttagcccacaggacagctcccgggcagaaagctttcaggccagccaggaaaac gtgcgctgtgagatcatcaggcctgtccccatggagaaagagcctcaaacctcccgaggc atgatgaagctgcggagacggacaaaggctctggaatcaaaggaaagggaatcggtgcat gatgtgcatctaaccagtgctggtgaagtgatgaaaaatcaaactgccagtgcagaggag cttcagtcaccagtgttcaggcacagcagcctctcgtacactgaggaacctgctcaaagg gcagctggggcagtgcttgtgcagggagagagaaatagtttcactcctgatgcagcatca gggcttgtacaggatgtgtttgagagcagtgtcactgcaggagagcctgagctgtcccca catgcgctgatggacagcagggatgtctggcagcctgaatcctcaagggctgtggccaca cctgacagacatgagccatgttcacagcatggagactctgttttacttgaccccagaggt gatggcagagaagaatcccccagtacaaaaaaacagccggagggtcagagtttgtgtgaa gatccgggagaattacatgggctcctggatttaatgtcagaaaatgaaatattgcctgac agcagaaataacaccataaccgaggagagcaaaaaccatgaaggacatcaaagtgacact aatacgttaaatccctgtcctgcagataaagctctggacagtgccgaagagcagctggag tgtcaacagcttgaaattgagtcaaggctgtctcctgctgacaaggcgttggctcccgag ggcacactgagctcttgcacagtggttgaagggctgctcttccccgtcgagtactacgtc cggacaactcgccgcatgtccagttgccagaggaaggtggatctggatgctgtaatcctc agccagctgggcaggagcaagaaaggtcagcggagtaaatgcaagcagaaagatgcaaac cccaatcagtcctcacaagagagaaacaagggtgatttggagccaggggttgggcccttc ccttttcttggggtagaagacgatcaagcaaactcaagtagttctcagaaatctcttcct gcatccagcagcagcagcagcacttctcttgaatccatttctcagaaaagcatcactagc acaaggcaagagcagagacaatcccagaggaaacagaagggaagaagaaagtctgcctgc aaagcccccatgcatccagtgtcacaagagcttatagagagtcaggatcccacagcggcc aatgaaagcagtgctctgctgtcaaatgagaaccagagtgaaaaggaaaactgtgatgct aaccttgaaaggtcatcctcagatgagaggaggctgtctggtgctgcagcactggggtct gcagggacaggagtgactggagctacaccggcagcgggtcctgaccctcctgcgggcagg agccaagtgccaggcaaatgccataaggctccgttggagcgggttcaaaatccactgcac agcagcaattccccgaacccgggcagtgccacttgtgccagccgtgtgggagatgtggac gccagtgctcctgtgtgtcagggagagaaccatccagtgcggcgtgtgaagagacagcgg ggagctgagcagctccccggggtcagtgtgcctctgcgccgctccctgcgctgctctgcc agacacaggccccaggcaggctcaacagatgagagcagtagaggatgcagcagtcccatg ggttcccagggtgctgctgcccttgggctccctgctgtggacctggacacctgtggctcc ctcttctccttccgcagcctccagtggctggtccctaagctgggcatcagggacttccac ttaccaaatgaggaatttggagtactgaaactggagaaattgaaatcttcccctgtgaat gacttggaggattttgtgtctggggatggtgtggctccagaggacacaccagatgcacaa atgaaacctaaagaaaaaagtctcagaagtaatttgcttttgccttgcaaaactggattg cctgaactcccttgcttggaaaacccaacttccaagaaggagctttccacccatgaattg ctatttactcccatggggactgtcttagctgaggctcccactcaccctgagatttcctca tctattttgccttttgtgggtgcaaccccaggtgtttcaccttcagtgcacactgaggtg ttccctgacaaaccttctgtacctgccttgccagtgacctcaccttccccgagaggagca gctgccctggtcctgggggatgtggcacacagagaccctgctgtgccactgcaccctgac agctgtgctgcaggggctgccagcaaccaggaggagcaagggacagcattgccttcagca gctgaaagaggtcctgagaaggaatctgatgagactgtgtccttggagaagcatcagcag ccagagaacaaagagcaggaatcctgcagagcttcacctgaacagagaagagatgcagca gaaccgctgactccagtgctgccggatggccccagagaagagagcctgcagtttgtgtca gagctaaaggacccgtcgtgctcggtggacgtgagcgccgtgtggtgggcagcagctggc ggcagggagctgcgggtggtcactgcctccgagagcgccgtgtccctctgggagccacgg gcgccctgctgctgggcaagggtgcacacctggcacctgcgagagattcctgtaatccag attgttcctctgccagacacctgtaacctcgtgtgtgtagcactgggagagctggagatt ggagaaataaggctcttgctttattcctctgagactgactcattcaagcactccctagtg aaaactgggaatataaaagcagttgttgggctaaaggactggaggctggtgagcagcagc aagaccatgcaggagcagcaagtggagatggtttctctgtcagagacaggggggagcaag gacaggcagactctgatgccccctgaagaaactgttacagcctttgctgaagtagaaggg atgagggaggccttggtgggcaccactgcagggaacagcattgtggtttggaatctgaaa acgggtcagctcctgaggaacatgcacgttggttattcctacccagctttcatctgccat cgagcctattctgactccggccttttgtttgttgttttaagccatcctcacgccaaagag agcgagtcctgtggaagcccagcgttccgagtggtggccttcaacccgcgcacgggccgg agcgcgggggtgatgttctcctgcctcccgcccggcctggcaggcaggtacctggagggt gacgtgtgggacaccgcgggagccgccgtgctgacgtcgggcgcggtggccgtgtgggac ctgctgcagggcggctgcacggccgtgctgcccccgggccctgcggggcgctgggcgctg gcccgctgggccgccggcggggccgtgctgctggccgggcgccgcgacggggccgtgcag ctgtaccggtaccggccgccgcagccgggagccgcctga

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