Lonchura striata (white-rumped munia): 110479553
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Entry
110479553 CDS
T05897
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110479553 (RBBP6)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110479553 (RBBP6)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
U-box type E3
110479553 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
110479553
NCBI-ProteinID:
XP_021402607
LinkDB
All DBs
Position
14:13346372..13374378
Genome browser
AA seq
1787 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
SALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETTFRSRSEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPVGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKIQQQQQQQQLPPP
PPPPPPPLMRQTITRTLQPLMRPAMARQQDPLMIPLASLASRSALSSLGPGPSMAAGLPV
NPSSVVVSDLPPAVSLSLRGEKPDGPFRDADAVLPPALMSAAELSKSSPLSISSLLEEKG
YQVPVLRQPAIPSLLGPQGQSIPTTGHPMRAGALRRPGWELSNRGRPHSDRAQRTQAPSL
PASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYPPAPA
NMSSAWVPTAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKEL
MEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSR
SPPYQRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTVPQGE
AEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQP
RPPVNRENFSPERFGPPGTRRENSPYARGRREEYPAGQSHRNRNVAGNYPEKPGRESHGI
KDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEAFPNVELLEGARKPREPVPAEDAK
TDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKVEKTKRKVEVAAAPK
KDSVAKPAKASQEKVDPDREKSPRTEPPVKKVKEELPKTDSVKTSSSQKDEKALGTPRKA
HPKVAKDHPETRPAKEEKAKKEHPKEAKAEKPSSKEEKSKKPAEKSKLSDAKLEKRKRKA
EEKADKEHEAASAKAYKLETAELKTSPKGKAEPEGEKGERTPEKDKAAFLNNPSKKIKLN
RETGKKIVSGENVPPGKEAVEKPEPSSSKVKAEKTKGKARRKVTAAEGTSSTLVDYTSTS
STGGSPVRKPEEKPDTKRTVIKTLEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEED
VKSTTPVPPTVGKPTSVIKPVSAKAPNLLKHTEKETEPLEKIQKAAKEASYESTQHDAKS
SKSSVSSEKGKTKDRDHSLSDKDSSEKRKSSVQPEKEHSERAAEQGNGKTVSQSSKDGRS
SEKHDSGRGSAAKDFTPNRDKKSDHDGGREHSSSKRRDEKSESARRKDSPSRVRDSTAVQ
KSKPREERVEPPKKGPAEAKRSSYSPPRERKPTEHKAVHDPKRPAEEHKAPDKNPGKEKE
KEKEKEKHVPEVKSNKEKEAGGNKAPVKQDSPEVKVEKENVAAQSDKGAAKPKPPASSAA
RLSSDLSRETDEAAFVPDYNESDSESNVSAKDEEAAGKTPKEAKEKAADKVKEEAAAPAP
AEQPEVGRSQSQSSPSRSRSRSHSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKKH
KKHKKHKKHVGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgcattacaagttctcctccaagctcaactatgacacggtcaccttcgac
gggctgcacatctccctgagcgacctcaagcgccagatcatgggccgggagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcgcagaccaaagaagaatacactgatgat
agtgctctgattcccaagaactcatcggtgattgtgaggagaatccccattggaggagtt
aaagcgaccagcaaaacatacgttatgactcctaaatcgcacaaaatcctagaaactact
ttcagaagtcgaagtgagccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgag
gaggataaaataaaagctatgatgacacagtctggccatgaatatgatccagtcaattac
atgaagaaacccgtggggccacctccaccctcctacacctgttttcgctgtggcaaacct
gggcactacataaagaattgtccaacgaatggggacaaaaatttcgagtctgttcccaga
attaaaaaaagcacaggaattccaagaagttttatgatggaggtgaaggaccccaacaca
aagggtgccatgctgaccaacactgggaaatatgcaattccaaccatagatgcggaagct
tatgctatcggaaagaaggagaagcctcccttcctacctgaggagccatcctcctcttca
gaagaagatgatcctattccagatgagctgttgtgtctcatttgtaaggatataatgacg
gatgcggttgttattccctgctgtggaaacagttactgtgatgaatgtattagaacagca
ctgctggagtctgaggagcacacatgccctacctgccatcagactgatgtttctcctgat
gctttaatcgccaacaagtttctgcgccaggctgtcaacaacttcaaaaacgaaaccggt
tacacaaagaggctccggaagattcagcagcagcagcagcagcagcagctgccgccgccg
cccccgccgccgccgccgcccctgatgcggcagacgataacgcgcaccctgcagccgctg
atgcggccggccatggcccggcagcaggacccgctcatgatcccgctggcctccctggcc
tcccgctccgccctctcgtccttgggccccgggccgtccatggcagctgggctgccggtc
aatccgtcttctgtggttgtctctgacctccctccagcagtgtccctctctctccgcggg
gaaaagccagatggaccttttcgtgatgctgatgctgttttgcctcctgctctgatgagt
gctgctgagctttccaaatcttcccctttgtcaatcagcagtttgttggaagagaagggc
tatcaggttcctgtactgagacaaccagcgataccaagtcttctgggccctcaaggacaa
tcgatacctacaactggtcatccaatgagagctggtgcacttcgcaggccaggctgggag
ctttcaaatcgaggacgcccgcacagtgaccgtgctcaaaggactcaggccccatcactg
ccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgtatcctccaccaccc
catgctcttcctcttcctccgggggtaccaccaccacagtttcctcctcagtttccacct
gggcagcctccatccgctgggtacactgtcccccctcccggatatcccccagctcctgca
aacatgtcatcagcttgggtcccaacagcagtgccagcggctcattcaaacaccatccca
acgacacaagcacctcctctctctagggaggagttttacagagagcaacggaggcttaaa
gaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgattttgctaaggaattg
atggaatataaaaagattcaaaaggagcgtaggcgttcgttttccaggtccaagtctccc
tatagtgcttcatcttactctagaagctcatacacctactccaagtcacgctcaggctcg
tcgcgctcccgctcctactcgcgctccttcagccgctcccattcccgctcctactcgcgg
tcgccgccctatcagagacgaggcaaagggaagagtcggaactaccgctcccgctcccgc
tcccacggctatcaccgctcccgctcccgctcgcccccgtacaggcgctaccactcccgc
tcccgctctccggtgttccggggccagtcccccaccaaacggacggtgccgcagggcgag
gccgagcgcgagtacttcaaccgctacagagaggtgcccccgtacgacatgaaggcttac
tatggccgctcggtggacttcagagatccctttgagaaagagagatacagagagtgggag
aggaactacagagagtggtacgagaagttttacaagggctatgccgtgggcgctcagcca
cggcctccagtgaacagagagaacttctctccagaacggtttggcccacctgggaccaga
cgagagaattcaccgtatgctcggggacggagggaggagtatcctgctgggcagagccac
aggaatcgtaatgtagctggaaactaccctgaaaagcctgggagagagagccatggcatc
aaagatcctacaaaatcaaaagagaaggaggtggaaaatccattgggagatggcaaaggc
aataaacataaaaaacaccggaagagaagaaaaggggatgagaatgaagcatttcccaac
gttgagctgttagaaggggcaagaaaacctagagagccagttccagcagaagatgctaaa
acagactctctattcatgctgccaagcagggatgatgccacccctgtaagggatgagccc
atggaagcagattccattgctttcaagccagtgtctgagaaggagaaaaaagagaaggat
aagccaaaagcaaaggttgagaaaacaaagcggaaagtagaagtggcggctgctccaaag
aaagacagcgtagcaaaaccagctaaagcttcccaggaaaaggtggaccctgatcgtgaa
aaatctcctcgaactgaacctcctgtaaaaaaagtcaaggaagagctgccaaagacagac
agtgttaaaacctcttcctcgcagaaggatgagaaggctcttggtacaccacggaaggct
catcccaaagtggcaaaggatcacccagaaaccagaccagccaaggaggagaaggcaaag
aaagaacatcctaaagaagccaaggcagagaagccctccagcaaggaggaaaagtcaaag
aaacctgctgagaaaagtaaactttctgatgccaaacttgagaaaaggaaaagaaaagca
gaggaaaaggctgataaagaacatgaggccgcttctgcaaaagcttataaactcgaaact
gcagaattgaaaacatcacccaaggggaaggctgagcccgagggggagaaaggagagcgg
accccggaaaaggataaagctgcttttcttaacaacccgtccaaaaaaattaaacttaac
cgagaaactggaaaaaagattgtgagcggagaaaatgtgccacctgggaaagaagctgtg
gagaaacctgagcccagcagcagcaaagttaaagcggaaaagacaaagggaaaagccaga
aggaaagtgacagcagctgagggcactagctcgactcttgtggattacaccagcacgagt
tccactggaggaagccctgtcaggaagcctgaggagaagccagacaccaaacgaactgtc
attaagaccctggaggagtataacaatgacattacagcccctgctgaggatgtcattatc
atgatccaggtccctcagtccaagtgggataaagatgactttgagtctgaagaggaagac
gtcaaatccaccaccccggtgcccccaactgtaggaaaacccaccagtgttatcaaacct
gtgagtgcaaaggcaccaaacctcctcaaacacaccgaaaaggagacagagcctctggag
aaaatacagaaagctgcaaaagaggcaagttatgaaagcacccaacatgatgctaagagt
tcaaaaagttctgtgtcgagtgaaaaaggtaaaaccaaagaccgggatcattctttgtca
gacaaggacagttctgagaagaggaagagtagtgttcagccagaaaaagagcactcagaa
cgcgcggctgaacaaggaaatggaaaaactgtatctcagtcttctaaagatggcagatct
tcagagaagcatgacagtggccgtggctccgctgccaaggacttcactcccaaccgagac
aagaagtctgaccacgatggtggcagggagcattcgagttccaagcgcagagatgagaag
agcgaatcggcacgcaggaaagactccccgtcccgggtcagagactccacagcggtgcag
aagagcaagccaagagaggagcgcgtggagccacccaaaaagggccctgcggaggccaag
cggagcagctacagccccccgcgggagcgcaagcccaccgagcacaaagctgtgcacgac
cccaagcgccccgctgaggagcacaaagccccggataaaaacccgggcaaagagaaggag
aaagagaaggaaaaggagaagcatgtaccggaagtcaagagcaataaggagaaagaggca
ggtgggaataaagcgccggtgaaacaggactcgccagaagttaaagtggagaaggagaac
gtggcggctcagagcgataaaggcgcggccaagccgaagccgccggcgagcagcgccgcg
cgcctctcgtccgacctcagccgcgagaccgacgaggccgccttcgtgccagactacaac
gagagcgacagcgagagcaatgtgtctgcgaaggacgaggaggctgcagggaaaacgccc
aaagaggcgaaggaaaaggctgcggataaggtgaaagaggaggcggcggccccggctccc
gccgagcagcccgaggtgggcaggagccagagccagagcagccccagccgcagccgcagc
cgcagccacagcccctccgagagccagacacggagccacagcagcagcgccagctcaggg
gagagtcaggacagcaagaaaaagaaaaagaagaaagagaagaagaagcacaagaagcac
aagaaacataagaagcataagaaacatgtgggaaatgaaacagaattggaaaagagccaa
aaacacaaacacaagaagaaaaaatcgaagaagagcaaagataaagagaaagacgaccaa
aaagtgaaatctgtcacgacataa
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integrated database retrieval system
