Lonchura striata (white-rumped munia): 110479708
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Entry
110479708 CDS
T05897
Symbol
PPARGC1B
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-beta
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110479708 (PPARGC1B)
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
110479708 (PPARGC1B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
110479708
NCBI-ProteinID:
XP_021402859
UniProt:
A0A218UAC9
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Position
13:17072260..17115797
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AA seq
985 aa
AA seq
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MAEPGPDCSSLLDEDLSSFVFSYLADSQYEVSGEEHLYSDFPEIDLSQLDAGDLDSAGCF
SELPWGGEHSETDSSQYSTDDSELLQIIDSENEALLAALTETLDDIQGDDMGLAAFRTME
EGDTLNPATTSPAPSPKPTAPVTGGPPPAPECDELSLLKKLLLSPSPPSCEAQRDGSARR
PGTPKSRPPRPCTKAEGPRDRRASVPQAQSRSCTELHRHLTSSTSCSHTKAPQAPEECPG
SSHHPSPGDCAHHEDDSDSSEDSLSSGDSAAALSSAEDGTGSQFSCEGELHSVVELIRYM
HTYCLPPRKLPARDPAGSGAQPCGSPFKRAKADCAPAPGSAQSRPGCAWQGSCRKPGASF
SILKELLARDLLCDVSKPYRLGRPVYAALARPPGSCSPVPPHGEDASGTCTSRARAAAAE
RGEPRQSPEAEAPRELEDDAGRQEGTAGTGKAARKQDSAVYAVRRSKRLNPELGHWLSFL
EEPHPEPPVPLGCREAAPCPLLEGLSAEEPAAEVEVGGTAPSAEPQPLCPGSLGDGEVGA
ESRRCALLEQTETPRCLTLSLAQTDPTFGKRNFEPMLTVELCGTAGLTPPTTPPYKPAEE
DLYKPDIPQEAGKEEGMAPSPGGAAGDARRGPRKQPERTELLAHLRRARPEQPGLLKRPF
SRSFGDHDYCQVLKPEPALQRKVLKSWEPPSRVETEHKRRVPAAHYQGLELGKDTGAEML
WKDGVKQLRDQEIRASLTKHFGFLDSALDEEDMVFCKTPEYDTVFEDSCSESGSPGEEDE
EEEEEEEEEHGDPELCLRRSALSRTSLHYCSRSRSSSGSSCCRSRSPASRRPFRCENGEQ
CQGGSGQRGQLKKRREKAIGEGRVVYIRNLSSSMSSSELKKRFEVFGEIVECQVLTRTNR
GEKYGFITYRYSEHAALSLKNGPSLRKRNEPSFQLSSGGLGRFFWTRYADLDCSTDESSP
APVKSKYETMDFDSLLQEAQLSLHR
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccggggccggattgcagctctctgctcgacgaggatctctcctccttcgtc
ttcagttacctagctgacagccagtatgaggtgtctggagaggagcacctctactccgac
ttccccgagatcgatctgtcccagctggacgccggagacctggactctgccggctgcttc
agcgagctgccgtggggcggggagcactcggagaccgactccagccagtacagcaccgac
gactccgagctcctccagataatagacagcgagaacgaagcgctgctggcagccctcacc
gagactttggatgatatacagggagatgacatgggcctggctgccttccgaactatggaa
gagggggacacgctcaaccctgccaccacctcacctgccccctcccccaaacccaccgcc
ccggtcacgggggggccgcccccggcccccgagtgtgatgagctgtctctactgaagaag
ctgctcctgtctccgtcgcctccgagctgcgaggcccagcgggacgggagcgcccggcgc
ccggggaccccaaaatcccggcccccacggccctgcacaaaggcggagggtccccgggac
agaagggcgagcgtcccgcaggcacagagccgcagctgcacggagctgcaccggcacctc
acctccagcacctcctgctcccacaccaaagccccccaggcacccgaggagtgccccggc
agcagccaccacccgtccccgggcgactgtgcccaccacgaggacgacagcgactccagc
gaggactcgctgagctccggcgactcggcggccgccctgtcctcggcggaggatggcacg
ggcagccagttctcctgcgagggggagctgcactcggtggtggagctgatccgctacatg
cacacctactgcctgccccctcgcaagctgcccgcccgcgaccccgccggcagcggggcc
cagccctgcggcagccccttcaagagagccaaagcggactgtgcccccgcgccgggcagc
gcccagagccggccgggctgcgcctggcagggcagctgcaggaaacccggagcatccttc
tccatcctgaaggagctgctggcgcgggacctgctgtgcgatgtgagcaagccataccgc
ctgggcaggcccgtgtacgccgccctggcacggccgcccggctcctgctcccccgtgccg
ccccacggggaggatgccagcgggacttgcacgtccagagcgagagcagcggcagcagag
cggggcgagccccggcagagccccgaggcggaggcgccgcgggagctggaggacgatgcc
gggaggcaggagggcacggcgggcacggggaaggcggcccgcaagcaggacagcgccgtc
tacgccgtgcgccgctccaagagactcaaccccgagctcgggcactggctctccttcctg
gaggagcctcaccccgagccccccgtgcccctgggctgcagggaggccgcgccgtgcccg
ctgctggaggggctctctgctgaagagccggcggccgaagtggaggtggggggcacagcc
ccgtcggcggagccccagccgctctgcccgggctcgctgggggatggcgaggtgggcgcc
gagagccggcgctgtgccctgctggagcaaacagaaacacccaggtgtctcacgctgtcc
ttggcacaaactgacccaacctttgggaagagaaactttgagccaatgctgactgtggag
ctgtgtggtacagcaggtctcacaccgcccaccactccgccatataaacccgccgaggag
gacctgtacaagccagacatcccccaggaggcagggaaggaggaagggatggcccccagc
cccgggggcgccgccggggacgcgaggagaggccccaggaagcagccggagaggacggag
ctgctggcccaccttaggcgggcgcgccccgagcagcccggcctgctcaagcggcccttc
tcccgctccttcggggaccacgactactgccaggtgctgaaacccgagcctgccctgcag
aggaaggtgctcaagtcgtgggagcccccgagccgggtggagacggagcacaagaggagg
gtcccggccgcccactaccaggggctggagctcggcaaggacacgggcgctgagatgctc
tggaaggacggagtcaagcagctgagagaccaggagatcagagccagcttaacaaagcac
tttggctttctggacagtgccctcgacgaggaggacatggtcttctgcaagacccccgag
tacgacaccgtctttgaggacagctgcagtgagagcggctcccccggggaggaggatgag
gaggaggaggaggaggaagaggaggagcatggcgaccccgagctgtgcctgaggagaagc
gccctttccaggaccagtttgcattactgctcccgcagcaggtccagctcgggctcctcg
tgctgccggtcgcggtcacctgccagcagacgccccttcaggtgtgagaacggcgagcag
tgtcagggcgggagtgggcagcggggccagctgaagaagagacgggaaaaggccatcggg
gaaggccgggtggtgtacatcagaaacctctccagcagcatgagctccagcgagctgaag
aaacgcttcgaggtgtttggtgaaatcgtggagtgtcaggtcctgaccaggactaacagg
ggggagaagtacggcttcatcacgtaccggtattccgagcacgccgccttatcgctgaag
aacggcccctcgctaaggaagaggaacgagccctccttccagctcagctctggtggcctg
ggccgcttcttctggaccagatacgctgacctggattgcagcacggacgagtcctcccca
gccccggtgaaaagcaagtacgagaccatggatttcgacagcttgctgcaggaggcccag
ctcagcctgcatcggtaa
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