KEGG   Lonchura striata (white-rumped munia): 110479828
Entry
110479828         CDS       T05897                                 
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110479828
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsr03019]
    110479828
Messenger RNA biogenesis [BR:lsr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     110479828
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_Vps41 Beta-prop_WDR19_1st Tricorn_2nd Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_SCAP WD40_RFWD3 eIF2A Ge1_WD40 Beta-prop_DCAF4 PROPPIN Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_SPT8 Cytochrom_D1 Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_Nup120_160 WD_LRWD1 WDR54 WD40_like GSDH Beta-prop_DCAF12 Beta-prop_IFT122_2nd DUF2415 Vgb_lyase Nse4-Nse3_bdg
Other DBs
NCBI-GeneID: 110479828
NCBI-ProteinID: XP_021403037
LinkDB
Position
10:complement(489189..493893)
AA seq 224 aa
MHIELTLLNKNQEQDPANWFLFFNTVDAWSLAFSPDSQYLATGSHVGKVNIFGVETGKKE
YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD
SQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDA
GTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYDCPV
NT seq 675 nt   +upstreamnt  +downstreamnt
atgcatatagaactgacactgttgaataagaaccaagaacaggatccagctaactggttt
ttattttttaatacagttgatgcttggtccctggctttttcacctgattcccagtacctt
gcaacaggaagtcatgtgggaaaagtaaatattttcggtgttgaaactggaaagaaagaa
tattctctggacaccagaggaaagttcatccttagcattgcatatagtccagatggaaaa
tacttggccagtggagcaatagatggcattatcaatatttttgatattgcaactggaaaa
cttctgcatacgctagaaggccacgccatgcccatccgctcgctgaccttctcccctgac
tcccagttacttgtcaccgcctccgatgatggctacatcaagatctacgacgtgcaacat
gcaaacttggctggcacattaagtggtcatggatcctgggttttaaatgtagcattttgt
cctgatgatacccattttgtttccagttcatctgataaaagtgtgaaggtttgggatgct
ggaacgaggacctgtgtccatactttttttgatcaccaagatcaggtttggggagtgaaa
tacaatggaagtgggtccaaaattgtgtctgttggtgatgaccaagaaattcatatttat
gactgtccagtttaa

DBGET integrated database retrieval system