Lonchura striata (white-rumped munia): 110480012
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Entry
110480012 CDS
T05897
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta
KO
K08525
retinoid X receptor beta
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03320
PPAR signaling pathway
lsr04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
110480012 (RXRB)
03320 PPAR signaling pathway
110480012 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110480012 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lsr03310
]
110480012 (RXRB)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
110480012 (RXRB)
Nuclear receptors [BR:
lsr03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
110480012 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
110480012
NCBI-ProteinID:
XP_021403355
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All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MGSPPSLGPAPTLGTPIPVIGYGSGPQINSAVPLALPPGGAAEDVKPPLGIRGPPPCAPH
GPGKRLCAICGDRSSGKHYGVSSCEGCKGFFKRTIRKDLTYTCRDNRECVVDKRQRNRCQ
YCRYQKCLATGMKREAVQEERQRGKDKDADGDFGAAPNEEMPVEKLLEAELAVEPKSDDG
AGGASPNDPVTNICQAADKQLFTLVEWAKRVPHFSGLPLDDQVILLRAGWNELLIASFSH
RSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIIL
FNPDAKGLSNPSEVELLREKVYASLESYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEH
LFFFKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggggtcccccccgagcctcggccccgcccccaccctggggacccccatccccgtcatc
ggctacggcagcgggccccagatcaactccgcggtgccgctggcgctgccgcccgggggc
gccgccgaggacgtgaagcccccgctgggaattcggggtccccccccctgcgccccccac
ggccccggcaagaggctctgcgccatctgcggggacaggagctcggggaagcactacgga
gtctccagctgcgagggctgcaagggcttcttcaagcgcacgatccgcaaggacctgacc
tacacgtgccgcgacaaccgcgagtgcgtggtggacaagcggcagcgcaaccgctgccag
tactgccgctaccagaagtgcctggccacgggcatgaagcgcgaggcggtgcaggaggag
cggcagcggggcaaagacaaagacgccgacggcgacttcggggcggcgcccaacgaggag
atgccggtggagaaacttctggaagccgaactcgccgtcgagcccaagagcgacgacggc
gccggcggagcctcccccaatgacccggtgaccaacatctgccaggcggccgacaagcag
ctcttcaccctggtggagtgggccaagagggtcccccacttctcggggctccccttggac
gaccaggtcatcctgctgcgggcaggctggaacgagctgctgatcgcgtcgttctcgcac
cgctcgatcgcggtgaaggacgggatcctcttggccacggggctgcacgtgcacaggaac
agcgcccacagcgccggcgtcggcgccatcttcgaccgggtgctgacggagctggtgtcc
aagatgcgggacatgcgcatggacaagacggagctgggctgcctcagggccatcatcctc
ttcaaccccgacgccaaggggctgtcgaacccctcggaggtggagctgctgcgggagaag
gtttacgcctcgctggaatcctactgcaaacagaaataccccgagcagcagggacggttt
gccaagctgctgctgcggctgccggcgctgcgctccatcggcctcaagtgcctggagcat
cttttcttcttcaaactcatcggggacacgcccatcgacaccttcctgatggagatgctg
gaggcgccccaccagctctcctga
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