Lonchura striata (white-rumped munia): 110480019
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Entry
110480019 CDS
T05897
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110480019 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsr01007
]
110480019 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsr03016
]
110480019 (GARS1)
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110480019 (GARS1)
Enzymes [BR:
lsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
110480019 (GARS1)
Amino acid related enzymes [BR:
lsr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
110480019 (GARS1)
Transfer RNA biogenesis [BR:
lsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110480019 (GARS1)
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
110480019 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
EcoRII-C
Motif
Other DBs
NCBI-GeneID:
110480019
NCBI-ProteinID:
XP_021403361
LinkDB
All DBs
Position
2:complement(4329788..4354386)
Genome browser
AA seq
685 aa
AA seq
DB search
MDGPQAEALLAPLRNAVRQQGELVRKLKEEKAPQVDIDRAVAELKARKRVLEAKELALQP
KDDIVDRVKMEDTLKRRFFYDQAFSIYGGVSGLYDFGPVGCALKNNIIQAWRHHFIQEEQ
ILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCTAE
KKAEMENVLTQLDNYGQQELADLFVNYNVKSPVTGNDLSPPVSFNLMFKTSIGPGGNMPG
YLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHF
VDPSEKNHPKFQNVADLNILLYSAKAQVSGQSAHVMRLGDAVQQGVINNSVLGYFIGRIY
LFLTKVGVSPEKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHAR
ATKVPLIAEKHLKEPRTVNIVQFEANKGAIGKAYKKDAKVVMEYLSMCDECYISEMEQLL
NEKGEFTVETEGKTFLITKDMVTVKRFQKTLHVEEIIPNVIEPSFGIGRIMYTVFEHTFR
IREGDEQRTYFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRTGISHKVDDAAGSI
GRRYARTDEIGVAFGITIDFDTVNRTPHTATLRDRDSMRQIRAEISELPGIIRDLANGYL
TWADVEAKYPQFEGQETGKKDTIEE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggacggcccgcaggccgaggcgctgctggcgccgctccggaacgcggtgcggcagcag
ggagagctggtgaggaagctgaaggaagagaaagctccccaggtggacatagacagagct
gtagcagagctcaaagctcggaagagggtcctagaagcaaaggagctggccttacagccc
aaagatgacatcgtggacagagttaagatggaagacacactcaaaaggaggtttttctat
gaccaagctttttctatttatggaggagtcagtggtctgtatgactttgggcctgttggg
tgtgctttgaagaacaacatcatccaagcatggagacatcactttattcaggaagagcaa
atcctggagattgactgcaccatgctcacgcctgagccggttctaaagacttctggtcat
gtagacaagtttgctgacttcatggtgaaagatgtgaaaaatggggaatgttttcgtgct
gatcatctcttaaaagctcacctgcagaaactgatgtctgacaagaagtgcacggcagag
aaaaaagcagaaatggaaaatgttctaacacagttggacaattatggccagcaagagctt
gcagatctttttgtgaactacaatgtgaagtcccctgtcactgggaatgacctgtcccct
cctgtttctttcaatctgatgttcaagacctccattgggcctggaggaaatatgcctggc
tatctgaggccagaaactgcacagggaatattcctcaacttcaaacgtctgctggagttt
aaccaaggcaaattgccttttgctgctgcccagattggaaattccttcaggaatgaaatc
tcaccccgctccggccttatcagagtgagggaattcaccatggcagaaattgagcacttt
gtggaccccagtgagaaaaaccaccccaagtttcagaacgtggcagatctcaacatcctt
ctgtactcggccaaggcccaggtcagcgggcagtctgcgcatgtcatgcggctgggggac
gccgtccagcagggtgtgatcaataactctgttcttggttacttcatcggcagaatctac
ctcttcctcacgaaggtcggcgtatccccggagaagctgcgcttccgacagcacatggag
aatgagatggctcattatgcctgtgactgctgggatgcagagtccaaaacctcctatggt
tggattgagatcgttggctgtgctgatcgttcctgctatgacctttcctgccatgcccgt
gccaccaaagttcctctcatagctgagaagcatctcaaagaacctagaacagtcaacatt
gttcagtttgaggcaaataagggagccattggcaaagcttacaagaaggatgccaaggtg
gtgatggaatacctttccatgtgtgatgagtgctacatcagcgagatggagcagctgctc
aacgagaaaggggaattcactgttgaaactgaagggaaaacttttctaataacaaaggac
atggttactgtgaagagatttcagaaaacattacatgtggaagaaatcatcccaaatgtc
attgagccctcgtttggcattggcaggatcatgtacacagtgtttgagcacacattccgc
atccgggaaggagacgagcagaggacgtacttcagcttcccagctgttgtagcaccgttc
aagtgctctgttcttcctctgagccagaatcaggaattcatgccttttgtcaaggaatta
tccgaagcactgaccaggaccgggatctcccacaaggtggatgatgcagcgggctccatc
ggccggcgctacgcccgcaccgacgagatcggcgtggccttcggcatcaccatcgacttc
gacaccgtgaaccgcaccccgcacacggccacgctgcgcgaccgcgactccatgcgccag
atccgcgccgagatctctgaacttcctggcatcatccgagacctggccaatggttatctc
acctgggctgatgttgaggcaaagtatccacaatttgagggacaagagactggcaaaaag
gacacaatagaggaataa
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