Lonchura striata (white-rumped munia): 110480092
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Entry
110480092 CDS
T05897
Symbol
SEC31B
Name
(RefSeq) protein transport protein Sec31B isoform X1
KO
K14005
protein transport protein SEC31
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110480092 (SEC31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110480092 (SEC31B)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lsr02044
]
110480092 (SEC31B)
Membrane trafficking [BR:
lsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110480092 (SEC31B)
Secretion system [BR:
lsr02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
110480092 (SEC31B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40
Beta-prop_EIPR1
Beta-prop_EML
WDR55
EIF3I
TPR_Sec16
Beta-prop_WDR35_TULP_N
MIOS_WD40
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_DCAF12
Prp18
Motif
Other DBs
NCBI-GeneID:
110480092
NCBI-ProteinID:
XP_021403479
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All DBs
Position
6:16881357..16916314
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AA seq
1220 aa
AA seq
DB search
MSSFELVQHQDCVDYEEQVFSAFLFFYLVLLVKMPTCVALVLLLGTSAQQLDASFSTNAT
LEIFEVDFRDPSLDMKQKGVLPASNRFHKLIWGNFGNGSAECSGVIIGGGDNGVLTMYSV
HRILASKGDPVMAHTEKHSGPVRALDFNPFQSNLLASGANDSEIFIWDLNNFSVPMTPGT
KSQPHEDISVVSWNRQVQHILSSAHPSGKAVVWDLRKNEPIIKVSDHSNRMHCSGMAWHP
EVATQLVLSSEDDRLPVIQIWDLRFATSPLSQLEGHTRGVLSVSWCQADPELLLSSAKDN
RILCWNPSLGEVVYELPIRSQWCFDVQWCPRNPSVFSAATFDGWINIYSVMGGNLEAQQK
TQADKISSSFNNLDPFGTGQSLPPLQVPEQVTQTTLIPPLKKPPKWIRRPVGVSFAFGGK
LITFGLTKAPGQQMQQTYPHQVFISQVTTETEFLLRSKELQMALQSGNLLDYCQGKIQTA
KLPFEENLWNFLKVNLEQEARAKLLKLLGYSKEDLQKKIASCLSNGIPDKQPLPEAGDTN
AAPDQLLMNSSDDVAAVSSSSAFFDNLIPQNMSILEIPVTEDTDGLISQALLLGNFEGAV
ELCMRAERFADAIILAIAGGDNLLKETQKRYFAKRKTNLSVLLSCIVQQNWQDIVCTCDL
QSWKEALAILLTYSKQEDYTHLCDMLGARLESEGDAALSNDACLCYISSGNVERLVECWV
KNHETSSPLALQDLIEKVMVLSRSTEMLRGTAGPAPGPVLAEQITQYASLLASQGCLAAA
MNYLPSSSKELLIEQLRDRLFHAQGENVGNQQPPPFPYTRVNVGVVKPTAAKGGSVLEGA
AHKAGPRHPEKPNYPSSFAPSAPPQPSVPSLFTPQPVPAMSVTPHHVAPPQASTGPQTSV
YSRGHPYPQYNLGLNPAPVSGPAVSQSQPFGPLGVRPVGPAPFSSQPSLPGQLMPMTSPG
VPAPRPALFTPASVPSSQLPAACPLPVASQSPLDFSSPPFSCPMNMGYPQGGPGAPSTKP
LPAAIPPPPTAQESWSDPFTGRGGLQKKKLSEKFTPLAPITTPVMGVPAEPQGIHPQLSR
LQESGQSPPGAPKEGSLQYHQLPREVIEKKELPPEHQALKATFEGLVQRCSAVATDPKTR
RKLEDALQRLECLYEKLREQALSPTILMGLHEIARCIEAKNYPQGLLVHTQVVSSSSFSE
VSGFMPILKVLMTIAGKLNV
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttttgaactagtacaacaccaagattgtgttgactatgaagaacaggttttc
agtgcttttctctttttttatcttgtgctcttggtaaaaatgcccacttgtgttgccctt
gtacttctgctaggaacatctgcccaacagctggatgcatccttcagtacaaatgccacc
ttggaaatatttgaagttgacttcagggatccctccctggacatgaagcagaaaggagta
cttcctgcctcaaacaggtttcataagctgatctgggggaactttggaaatgggtctgca
gagtgctctggagtgatcattggtggaggggataacggagtgctgacaatgtacagcgtg
caccgcatcttggcttcgaagggtgaccctgtcatggcccacacagagaagcattcaggt
cctgttcgagcccttgacttcaacccttttcagagtaatctcttggcttccggagccaat
gattctgaaattttcatctgggacttgaataatttcagtgtgcctatgactccggggact
aaatcacagccacatgaagacatcagtgtggtgtcctggaatcggcaagtgcagcatatc
ctgtcctccgctcaccccagcggcaaggctgtggtttgggacctcaggaagaatgagccc
atcatcaaagtcagtgaccacagcaacagaatgcattgctcaggaatggcctggcatcca
gaagttgcaacccagttagtcctttcctctgaggatgaccgtttgccagtgatccaaata
tgggacttgcgctttgctacctctcctcttagccagctggaagggcacaccaggggagtt
ctctctgtttcttggtgccaggctgaccctgaactgctgttgagtagtgccaaagacaac
cggatcttgtgctggaacccaagtctgggggaggtggtgtatgagttgcccattcggagt
cagtggtgctttgatgtccagtggtgtcctaggaatccttcagtcttctctgctgccact
ttcgatgggtggatcaacatttattctgttatgggtgggaacttagaagctcagcagaaa
acacaggctgacaagatctcttcctccttcaacaacctggatccctttggcacaggacag
agccttcctcctctgcaggtgccagagcaagtaactcagaccaccttgattccaccatta
aaaaagccacccaagtggattcgcagacctgtgggggtttcatttgcatttggaggaaaa
ctgattacctttggtcttaccaaagctcctggacagcaaatgcagcagacttacccacac
caggtattcatcagtcaagtcactactgaaactgaattcctactccgatccaaggagctg
cagatggctttgcagtcagggaacctccttgattactgccagggcaagatccagacagcc
aagttgccatttgaggagaacctttggaacttcttgaaggtgaatttggagcaggaggca
agggctaaacttctcaagctgctgggctacagtaaagaggatctgcaaaaaaagattgcc
tcatgtttgagtaatgggatcccagataaacagccccttcctgaggcaggtgatacaaat
gctgcaccagatcagcttttgatgaattccagcgatgatgtagctgctgtttcttcctct
tcagccttttttgataacctcatcccacagaatatgagcatattggagattcctgtcaca
gaagatacagatggactcatcagccaggcccttttgttggggaattttgagggtgcagtg
gagctgtgcatgcgagcagagcgctttgctgatgccatcatcttagctatagctggtggg
gataacctcctaaaggaaacccagaagcgctactttgccaagcggaaaacaaacctctct
gtgctgctttcctgcattgtgcagcagaactggcaagatattgtttgcacgtgtgattta
cagagctggaaggaggcactggccatcttgttaacatactcaaagcaggaagactacact
catctctgtgacatgctgggtgcccgcctggagtcagagggagatgcagccctgtccaat
gatgcctgcctctgctatatctcatcaggcaatgtggagaggctggtggaatgctgggta
aaaaaccatgagacttcatcaccccttgccctacaggatcttatagaaaaggtgatggtg
ctgagcaggtccactgagatgctccgaggcacagcaggaccagcaccaggccctgtcttg
gcagaacaaatcacccagtatgccagtctcctggcatcacaaggatgcttggcagctgca
atgaattacctacccagcagctctaaagagctcctgattgaacagctccgagaccggctc
tttcatgctcaaggagagaacgtgggtaatcagcagccacccccttttccctacactcgt
gtcaatgtaggggtcgttaaacccacagcagccaagggtggttccgtccttgaaggagca
gcccacaaagcaggtcccagacatccagagaagcccaactatccatcatcctttgcccct
tcagcaccacctcagccttcagtgccttccctcttcacacctcagccagtgccagccatg
tctgtgacacctcaccacgttgcccctccccaggccagcacgggtccacaaacaagtgtc
tattccagagggcacccttatccacagtacaacttgggcttgaatccagcacctgtctca
gggccagctgtgtcacagtctcagccatttggaccattgggagttagacctgttggtcct
gctcctttctccagccagccctctctgccaggacagttgatgcccatgacatctcctggt
gttccagcacccagacctgccctcttcactccagcctcagtcccatcatctcagcttcct
gcagcctgccctctccctgtggcaagccagtctcctctagacttctcttcaccacctttc
agctgccccatgaacatgggttatcctcagggaggtccaggagccccatctactaaacca
ctgccagcagccattcctcctcctcccacggctcaggaatcctggagtgacccctttact
ggaagaggaggccttcaaaagaaaaagttgtctgagaaatttactcctctggcccccatc
acaactccagtaatgggtgtgcctgctgaaccccaagggatccatcctcagctatccagg
ttgcaagaatctggccagtcacccccaggagcacccaaggaaggcagcctacagtatcac
cagctacctcgagaagtcattgagaagaaggagctgccccctgagcaccaggctttgaag
gctacctttgaagggttggtgcaacgctgctcggctgttgccactgatccaaaaacgcga
aggaagctggaggacgcgctgcagcggctggagtgtttgtatgagaagctgcgcgagcag
gcgctctctccaaccatcctcatgggtctccacgaaattgcccgatgcattgaggctaag
aactacccacagggtctcctggttcacacccaagttgtgagcagcagcagtttcagtgag
gtgtctggtttcatgcccatcctgaaagtcctcatgaccatagcaggcaagctgaatgtg
taa
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