Lonchura striata (white-rumped munia): 110480128
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Entry
110480128 CDS
T05897
Symbol
AFF2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110480128 (AFF2)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
110480128 (AFF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
110480128
NCBI-ProteinID:
XP_021403540
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All DBs
Position
4A:complement(13091722..13424329)
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AA seq
1285 aa
AA seq
DB search
MGCAEKMSWKETGHGESHYEQDRSALKRKEWERRNQEVQQDEDLFASGFNLFGEPYKTNK
GDALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKNSVPQTPIDKNEQNFFPEPRNRMI
PSHQISGNSSTSMPPPSSLSSNSTLLHSHQSSRKSRTDWSRSGHNSSGAQPSQPSGQQSR
TKHSSSHDQSQGRYEDLYNCQSEQHKSGGTEEASAMATSSHSRRHTHAKSAPGEHTYKEN
SHSKSPTELEFVGHGPGSPLPSTSLLTANNGLSTQNFPPGLHCKNSMVQQKPTAYVRPMD
GQDQVPNDSPELKPPIEIESGYGNQSFGALLEGKVNTPSSKNKVPKLNIPPVSEVALPND
SSCVEEILREMTHSWPPPLTAIHTPGKAEQTKFSIPSKDSQHLTSGYNVQKWSDPAGKVA
TKSVPQKSMLEDDLKLSSDEDDNDQAAEKTKLRNIPVNSLPVPVAHAAGLAHSSGGSGSS
SESESSSESDSDSESSSSDSECNEESRSATPEPEPPSTNKWQLDKWLNKVNPHNKTIINN
QNEPHSESSSQAQSNQQAEGPNKGKLNSSLPPTDSKDRAILSPIREKAKPRVAQKTPEAK
SSKQKSPAHNEPTSQRTTGKKQPKKVERTSSVEEYNWPKPNNTSNTPKEKDTQEPPEQPK
VRTKAAVGKTAPRKEPRTSTGLTSEKKKYRGPSKIVPKSREFIETDSSTSDSNTDQEESL
QAKVLPACTGSGSGVKVKDSGSNILSVSSLTSNSSNTSIDQTSNDLEEQLFSPIPIVQNE
LLSPLREYEELKSLWVKIDLSLLSRIPGQETFETTSVKSEPREANVKHRRPSRESPTPAA
EKPPTKSKRKHKQTESLETFVESKKQRLEEPPASCLLPPCISPIPNHRITSTKESSSSSV
KKVTKKREEKLFPPPLSPLLDDPVHRRHGSDSSSFSQEPAVTNPSQTSSSSSSVSKHRKN
ENKSSSNPKGICEEESHSTPTANTLLDTSHLEPDLWSAMPTLSNGNSEPRRPKITFDDVL
HNADYYMQEAKKLKHKADALLEKFGKAVNYADAALSFIECGNAMERDPLEAKSPYTMYSE
TVELIRYAMRLKNFTGSSATEGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYF
KGFTRCYTDVKGRMSKQNSSKASQAPSPWGGNGKSTETPSPMSLSPSPVSSAGSSSGTAG
SSSVGTITIPQRIHHMAASHVNITNNVLRSYEHWDMADKLTKENKEFFVELDSVMGPLTQ
HSSMTNLVRYVRQGLHWLRIEAHLL
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgggatgtgctgaaaagatgagctggaaagagacaggacatggggagagtcactatgag
caagaccggagtgcacttaagcggaaggaatgggagagaagaaaccaggaagtccagcaa
gatgaagatctctttgcttcgggttttaacctctttggggaaccctacaagacaaataaa
ggcgacgcccttgcaaaccgtgtccagaacacattgggaaattatgatgagatgaaggat
ctgttaaccaaccactccaatcagagccaccttgtaggaatcccaaagaattctgtccca
cagacacccattgacaaaaatgaacagaactttttcccagaaccgaggaacaggatgatc
ccatctcatcagatcagtggcaactcatcaacatcaatgcctccgccttcttcattgtca
tctaattctactttgctgcacagccaccagagcagcaggaagtcgaggacagactggtca
cgcagtggtcacaactccagtggggcccagccaagccagcccagtggtcagcagagtcgg
acaaagcacagctcttctcatgaccagtcacagggcaggtatgaagatctctacaattgc
cagagtgagcagcataaaagtgggggaactgaggaagcaagtgctatggcaacatcttca
cattcaaggaggcacactcatgcaaagtcagcacctggagagcacacttacaaagaaaac
agtcattcaaagtcacccacagagcttgagtttgtaggccatggtcctggatctccactt
ccttccacttctttgttaactgcaaacaatggtctttcaactcagaatttcccaccagga
cttcactgtaaaaacagcatggtccagcaaaagcctacagcctatgtcaggcctatggat
ggtcaggaccaggtacccaatgactcacctgaactgaaacccccaatagaaattgagagt
ggatatggaaatcagtcctttggagcactgctggaaggaaaagtgaacacacctagttcg
aagaacaaggtaccaaagctcaacattcctcctgttagtgaagttgcccttcccaatgac
tccagctgtgtggaagaaatactgcgggagatgacccattcctggcctcctcctctcact
gctattcacactccgggcaaggccgagcagaccaagttttctatcccaagcaaggactcc
caacatctgacctcaggatacaatgtacaaaagtggagtgatccagcagggaaagttgca
actaagtcagtgccacaaaagtcaatgcttgaggatgatctaaaactcagcagtgatgaa
gatgataatgatcaggctgccgaaaagacaaaattgagaaacattcctgtaaacagcctg
ccagtgccagtggcacacgccgctggcttggcccattccagcggcggctccggcagctcc
agcgagtccgagagcagctccgagtccgactccgacagcgagagcagctccagcgacagc
gagtgcaacgaggagtcacgcagtgccacgccagagcccgaacccccctcaacaaacaaa
tggcagctggataaatggctaaataaggtgaacccccacaacaagaccatcatcaacaat
cagaatgagcctcacagtgagagcagctcccaggcccagagcaaccagcaggccgaaggg
ccaaacaaagggaagctcaacagcagcctgcccccgaccgattccaaagaccgggcgatc
cttagtcccatccgagagaaagccaaaccacgggttgcccagaaaaccccagaggcaaaa
agctccaagcagaagtcaccagctcataatgagccaacttcacaaaggactactgggaaa
aagcaacccaaaaaggtagaaaggacttccagtgtagaagagtataactggcccaaacca
aataataccagcaacactcccaaagaaaaagacacacaggaaccccccgagcagccaaag
gttcgaactaaagcagcagttgggaagacagctccaaggaaagaaccacgaactagcaca
ggtctcacttcagagaagaaaaagtacagaggccccagcaaaattgtcccaaagtcacgg
gagttcattgaaactgattcatctacttctgattcaaacacagaccaggaggagagcttg
caggcaaaggtgctgccagcctgcactgggtctggcagtggtgtcaaagtgaaggactct
ggcagtaacatcctcagcgtaagtagcttaaccagcaatagcagcaacacatccattgac
cagaccagcaacgacctggaggagcagctcttttctcctatcccaatcgtacaaaatgaa
cttctgtccccactgagagaatatgaagaactcaaatctctgtgggtgaaaatagacctt
agtttactctctaggatacctggacaggaaacttttgagaccacgtctgtgaaaagtgaa
ccaagagaggcaaatgtgaaacacaggcgaccatctcgagagtcccctaccccagcagct
gaaaaaccccccaccaaatccaaaagaaaacataagcagacagaaagcctggaaaccttt
gttgaaagcaagaagcagcgcctggaggagcctccagcttcctgtctgctcccaccttgt
atctctccaataccgaaccacagaataaccagcactaaagagagcagcagtagctcggtg
aagaaggtgacaaagaagagagaagagaagttgttccctcctcccttgtccccgctcctg
gacgatcctgtgcaccggcggcacggcagtgacagcagctccttcagccaggagcctgct
gtcacaaacccctcacagaccagcagctcttcctcctctgtttctaaacacagaaagaat
gaaaataaatcttcttctaaccccaaaggaatctgtgaggaagaatctcacagtacaccc
acagccaacactctccttgacaccagccatctagaaccagacctctggtctgcaatgcca
acgctttccaatgggaattctgagcccagaagacccaaaataacatttgatgatgtgctg
cacaatgcagattattacatgcaagaggctaagaagctgaagcataaagcagatgcactg
ctggagaagtttggtaaagcagtgaattatgctgatgctgccctctccttcatcgagtgt
gggaacgctatggagcgagatccattagaagctaaatctccatacaccatgtactcagag
actgtggaactcatcaggtatgcaatgagactcaagaatttcacaggctcttctgccaca
gaaggggacaagaaattagcagttttatgctaccgatgcttatcacttctctacttgaga
atgtttaaactaaagaaggaccatgctatgaagtactccagatctctgatggaatatttt
aagggttttacaaggtgctacacagacgtgaaaggcagaatgagtaagcagaactcttca
aaagcctcacaggccccctcaccttggggcggcaatggaaagagcacagaaaccccctcg
cccatgtccctgagcccgtcccccgtcagctctgctgggagcagctcgggcaccgccggc
tcttcctcggtggggaccatcaccatcccccagcgcatccaccacatggctgccagccac
gtcaacatcaccaacaacgtcctgcgcagctacgagcactgggacatggctgacaagctg
accaaggagaacaaagagttctttgtagagctggactcagtgatgggacccttaacacaa
cacagcagtatgaccaatctggttcgttacgttcgccagggactccactggctccgcatt
gaggctcatttgttgtag
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