Lonchura striata (white-rumped munia): 110480130
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Entry
110480130 CDS
T05897
Symbol
GBF1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110480130 (GBF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110480130 (GBF1)
Membrane trafficking [BR:
lsr04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
110480130 (GBF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF1045
DUF758
Motif
Other DBs
NCBI-GeneID:
110480130
NCBI-ProteinID:
XP_021403552
LinkDB
All DBs
Position
6:16229337..16329337
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AA seq
1879 aa
AA seq
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MRGIVRMVDKNIYIVQGEINAVVGAIKRNARWSTHTHLDEERDPLLHSFSNLKEVLNNIT
ELSEIEPNVFLRPFLEVIRSEDTTGPITGLALTSVNKFLSYALIDPSHEGTAEGMENMAD
AVTHARFVGTDHASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLS
ELLRKSAEHTLVDMVQLLFTRLPQFKEEPKSYMGTNMKKAYSILWKNKRVQLKMRAGGMS
ESSKWKKQKRSPRPPRHVTKVSPGTEQSMGNATNTTASGVAFIDGPSPSSSGSSENVSSA
VSPVTDSGLELSSQTTSKEDLTDLDQVASLGLNAGTSSNEAKVTENQNQPELQNESLREE
KVQSASVESIPEVLEECTSVAEHSDSASVHDMDYVNPRGVRFTQSSQKEGAALVPYGLPC
IRELFRFLISLTNPHDRHNSEVMIHMGLQLLTVALESAPIANCQSLLGLVKEELCRHLFQ
LLSVERLNLYAASLRVCFLLFESMREHLKFQLEMYIKKLMEIIAVENPKMPYEMKEMALE
AIVQLWRIPSFVTELYINYDCDYYCANLFEELTKLLSKNAFPVSGQLYTVHLLSLEALLT
VIDSTEAHCQAKVLSNIHQQEKEVGKPSPETINTTKETSNNIERVFSEGKSSSAVSEPAG
ACPPTSGCLMADQMKESCMELEGGSEAAEKSTPRKPTRFSCVLPSPQELMQIKNKKKLLI
TGTEQFNQKPKKGIQFLQEKNLLATPIDNNEVARWLRENPRLDKKMIGEFVSDRKNIDLL
ESFVGTFSFQGLRLDEALRLYLEAFRLPGEAPVIHRLLEAFTEHWRKSNGSPFANSDACF
ALAYAVIMLNTDQHNHNVRKQNVPMTLEEFRKNLKGVNGGKDFEQDILEDMYHAIKNDEI
VMPEEQTGLVKENYIWNVLLHRGATDEGIFLHVPPGSYDHDLFTMTWGPTIAALSYVFDK
SLEETIIQKAISGFRKCAMISAHYGLSDVFDNLIISLCKFTALSSESIENLPTVFGSNPK
AHIAAKTVFHLAHRHGDILREGWKNIMEAMLQLFRAELLPKAMVEVEDFVDPNGKIYLQR
EETPSNRGESTVLSFVSWLTLSGTEQSGMRGPSTETQEAKRAALECIKQCDPEKLITESK
FLQLESLQELMKALISVTPDEETYDEEDAAFCLEMLLRIVLENRDRVTCVWQTVRDHLYH
LCIHAMEFCFLVERAVVGLLRLAIRLLRRDEISAQVLLSLRILLMMKPNVLSRVSHEVAY
GLHELLKTNAANIHSGDDWYTLFTLLECIGSGVKPPAALQVTARTDNDTGAQSDSEVSSS
YHPSDMSLDRGYTSDSEVYTDHGKPGKMHRSVTDVDVMNSGWLVVGKDDIDNSRSTAGLS
RLGPSPLVNQYSLTVGLDLGPHDTKSLMKCVESLSFIVRDAAHVTPENFELCVKTIRIFV
EASLNGGYKSQEKRGKSHRYDSKSSRLKKKPKDSSTRRSRVLSQHQAHTHSDEDEDESIP
ASYHTVSLQVSQDLLDLMHTLHTRAAGIYSSWAEEQRHLETAARKITADSRTLWSNCWCP
LLQGIAWLCCDARRQIRMQALTYLQRALLVHDLQALDALEWESCFNKVLFPLLTKLLENI
SPADVGGMEETRMRASTLLSKVFLQHLSPLLSLTTFAALWLTILDFMDKYMHAGSSDLLL
EAIPESLKNMLLVMDTAGIFHSADSRTGYSDLWEITWERIDCFLPRLRDELFKQTVIQDP
VPNIPVEQQHQKTIVSALPPSPVGDVRPSTHVAPLEKPCEPAVSESERATSPVSPTISTS
ASPSFPASASAKSSPVTDVPPTTAQPPLILQPLASPLQVGVPPMTLPIILNPALIEATSP
VPLLATPRPTDPITSSEVN
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atgcggggaattgtcaggatggtggataagaacatttacattgtacaaggtgaaatcaat
gcagtggtgggagccataaagcgtaatgcccgatggagcactcacacacatctggatgaa
gaaagggatcccctgctgcatagctttagcaacctaaaagaagtgctgaataatataaca
gagctatctgaaattgaacctaatgtgtttcttcggccttttctggaagtaatccgttct
gaagacactacaggccccataactggattggcactcacctctgtgaataagttcctctca
tatgcactaatagatcccagccatgagggcacagcagaggggatggagaatatggcagat
gctgtcactcatgctcgattcgtgggcacagatcatgcgagcgatgaggttgtcttgatg
aaaatcctacaggtgttgaggacgttgctgctcaccccagtgggagcccacctcaccaat
gagtcggtgtgtgagatcatgcagtcctgtttccgcatatgcttcgaaatgaggctcagt
gagttattgagaaaatctgcagagcacactctggtcgacatggtgcagctgctcttcaca
aggttgcctcagtttaaagaagagcctaaaagctacatgggaacgaacatgaagaaggct
tacagtatcttatggaaaaacaaacgagtacagttgaaaatgagagctggaggaatgagt
gaatcatcaaaatggaaaaagcagaagagatcacctaggcctcctcgacatgtaactaag
gtctctcctgggactgaacagtcaatgggcaatgctactaataccacagcaagtggagtt
gctttcatagatggtccttctcccagctcctctgggagctcagaaaatgtttcatcagcg
gtcagccctgttacagacagtgggttggagttgtcctcacagacaacatccaaggaagac
ctgacagatttggaccaagtcgcttctttgggacttaatgcaggaacatcttcaaatgag
gccaaagtcactgaaaatcaaaatcagcctgaactccagaatgaaagcctgagggaggag
aaggtccagtcagcttctgttgagtctatccctgaagtcctagaggagtgcacatctgta
gcagaacattctgactctgcctcagttcatgacatggactatgtaaatccccggggagta
cgttttactcagtcttcccaaaaagaaggagcagctctggtcccatatgggttgccatgt
attagagaactgttccgctttctcatctcactcaccaaccctcatgaccgccacaactct
gaggtgatgatccacatggggctgcagctgctgactgttgccctggagtcagcacccatt
gcaaactgtcagtccctcttgggactcgtgaaggaggagttgtgccggcacctgtttcag
ctactgagtgttgaacggctcaatctgtatgcagcctccctcagggtgtgctttcttctc
tttgagagcatgagagagcatctgaaattccaactggagatgtatatcaagaagctgatg
gaaataatcgctgtggaaaacccaaagatgccctatgaaatgaaggagatggctttggaa
gccattgttcagctgtggaggattcccagttttgtgactgagctgtacattaactacgac
tgtgactactactgtgccaacctcttcgaggagctcaccaagctgctctccaagaatgcc
tttccagtttctggacagctgtatactgtccatctgctgtctctggaagcattgctgaca
gtgatagatagcactgaggcacattgccaggctaaagtgctgagtaatatacatcaacaa
gagaaggaagttggcaaacccagcccagaaaccatcaacaccaccaaagaaacaagcaat
aatattgagagagtattcagtgagggaaaatcttccagtgcagtctcagagccagctggg
gcatgtcctcccaccagtgggtgccttatggctgaccagatgaaggagagctgcatggaa
ttggaaggaggaagtgaagcagctgagaagagtacccccaggaaacctactcgattttct
tgtgtccttccaagtcctcaggaacttatgcagattaagaacaaaaagaagctcctgata
accggtacagagcagttcaaccaaaaaccaaagaaagggatacagtttctgcaggagaaa
aaccttcttgccacccccattgacaacaatgaagtggccaggtggttacgggaaaatcct
cgcctggacaaaaagatgattggggaatttgtgagtgaccgtaagaacatagacttgctg
gaaagctttgttgggactttcagcttccaaggtttaaggctggatgaagctttacgactt
tatctagaggcctttagattaccaggagaggcacctgtaattcacagactgttagaagcc
ttcacagaacattggaggaaatcaaatgggtctccatttgcaaatagtgatgcctgcttt
gccctggcctatgcagttattatgctgaacactgaccagcacaaccacaatgtccgcaag
cagaatgtcccaatgactctggaggagtttcggaagaacctgaaaggtgtgaatggaggc
aaagattttgaacaggacatcctggaagacatgtatcatgccatcaaaaatgatgagata
gtgatgccagaagaacagacgggtctggtgaaggaaaactatatctggaatgtcctgctc
catcgtggtgccactgatgagggaatatttctccacgtgcctcctggaagctatgaccat
gacctcttcaccatgacatggggacccaccattgcagcactttcttatgtttttgacaag
agcttagaagaaacaataatccagaaggctatctctggtttcaggaaatgtgcaatgatt
tctgctcactatggccttagtgatgtgtttgacaatctcataatttctctctgcaagttt
acagctctcagcagtgagtctattgagaacctgcccactgtttttggaagtaatcccaag
gcccatattgcagcaaagacagtgtttcatttggcccatcgccatggtgacattctgcga
gagggctggaaaaacatcatggaggccatgctacagcttttccgagcagagctgctgccc
aaggccatggtggaggttgaagactttgtggatcctaatggcaaaatctatctacagcgt
gaggagacaccatccaaccgtggtgaatcaacagtactgagttttgttagttggctcacc
ctcagtgggacagagcaatctggtatgcgagggccatctacagaaacacaggaggcaaag
cgagcagctttggagtgcataaagcaatgtgatcctgagaagttgatcacagaaagcaaa
tttctccaacttgaatccctccaggagctcatgaaggcattaatctctgtgactcctgat
gaggagacatatgatgaagaagatgcagccttctgcttggagatgcttctgcggattgtt
ctagagaatagggaccgtgtgacctgtgtctggcaaactgtccgagaccacctttatcat
ctctgtatccatgcaatggagttctgcttcttggtggagagggcagtggtggggctgctg
agactggccattcgactgctgcgtcgagatgagatcagtgcacaggttctcctctcatta
cgtatcttacttatgatgaagccaaatgtgctatccagagttagccatgaggttgcctac
ggcctccatgaactcctgaagaccaatgctgccaacattcactctggggatgactggtac
acgctcttcaccctcctggagtgcattgggtctggggtgaagccacctgcagccctgcag
gttacagcaaggacagataacgacacaggtgctcagtcagacagcgaggtgtcctcctcc
tatcatccaagtgacatgagcctggaccgtggctacacctctgactccgaggtgtacaca
gaccatgggaagccaggcaagatgcatcgctcggtcacagatgtggatgtcatgaacagt
ggctggctagtggtggggaaagatgacatcgacaactccagatccactgctgggctcagc
aggctgggtccatcacctctcgtcaaccagtacagcctgacggtgggactggatttaggc
ccacatgacacaaagtctctcatgaaatgtgttgagtccctgtccttcattgtgcgagat
gctgcccatgttacacctgagaactttgaactctgtgtcaaaacaatacgtatcttcgtg
gaggccagcttgaatgggggctacaagtcccaggagaagagggggaagagccacaggtat
gacagtaaatccagtcggttaaaaaaaaagccaaaagacagctccacacggcgatcccgg
gtgctgagccagcaccaggcgcacacacacagtgatgaggacgaggacgagagcatccct
gccagctaccacactgtgtctttacaggttagtcaggacctcctggacctcatgcacacc
ttgcacacgcgagcagctggcatctatagctcctgggcagaggagcagcgacacctggag
acagcagccaggaaaatcacagcggattcccgaacactgtggtccaactgctggtgtcct
ttgctacagggtattgcctggctgtgctgtgatgcccgacgccagatccgaatgcaagca
ctcacttacttgcagcgggccctgctggtacatgacctgcaggccctggatgccctggaa
tgggagtcctgcttcaacaaggtgctgtttcctctgctaaccaagctactcgagaacatc
agcccagctgatgttggtgggatggaagaaacaaggatgagagcctcaacactactctcc
aaggtgttcctacagcatctctccccactgctctcactgaccacctttgctgccttgtgg
ctcacaatcctggattttatggacaaatacatgcatgctggctccagtgacttactgctg
gaggccattccagagtctctgaagaatatgctgcttgtaatggatacagctggaatattc
cacagtgccgactcacggacgggatactcggatctctgggagatcacgtgggagcgcatt
gactgtttcttacctcggctgcgggatgagctcttcaaacagacagtcatccaagatcct
gtcccaaacataccagtggagcagcagcatcagaaaacaatagtgtctgcactgccccct
tctcctgtgggggatgtgagaccatccacccatgtggctcctttagagaagccatgtgaa
ccggctgtcagtgagtctgagagagcaacttcacctgtctcacccaccatcagcacctct
gcctctccttccttcccagcatcagcttcagccaagtcaagccccgttacagatgtacct
cctacaacagcacagccgccactcatcctgcagcctcttgcctcccccctgcaggttggg
gtgccacctatgactcttccaatcattctcaacccagccctaattgaagccacctctcct
gttcccctcttagctactccacggcccactgaccctatcacaagctctgaagtcaattaa
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