Lonchura striata (white-rumped munia): 110480132
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Entry
110480132 CDS
T05897
Symbol
FMR1
Name
(RefSeq) fragile X messenger ribonucleoprotein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110480132 (FMR1)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110480132 (FMR1)
Factors involved in mRNA localization
Other mRNA localization factors
110480132 (FMR1)
mRNA cycle factors
Stress granule specific factors
110480132 (FMR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
KH_1
FXMR_C2
Agenet
KH_2
KH-I_KHDC4-BBP
pAdhesive_11
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
110480132
NCBI-ProteinID:
XP_021403553
UniProt:
A0A218V4J0
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Position
4A:complement(13545388..13576749)
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AA seq
548 aa
AA seq
DB search
MEELVVEVRGSNGAFYKAFVKDVHEDSITVSFENNWQPERQIPFHDVRFPPPAGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLAVPEDLRQMCAKESAHKDFKKAVGAFSVTYDSENHQLIILSINDVTTKR
ANMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFVVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSYLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENDKNIPQEEGMVPFVFVGTKDSITNATVLLDYHLNYLKE
VDQLRLERLQIDEQLRQIGATSRPPPNRTDKDKGYMTDDGPGLGRGSRPYRNRGHSRRGP
GYASGTNSEASNASETESDHRDELSDWSAAPAEEERDNYLRRGDGRRRGGGARGQGGRGR
GGFKGNDEQSRTDNRQRNSREAKGRTADGSLENTSSEGSRLRAGKERNPKKEKTDGADAQ
QPLVNGVP
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaggtgcggggctccaacggggccttctacaaggcatttgta
aaggatgtgcatgaagattcaataacagtttcatttgaaaacaactggcaaccagagaga
caaatcccattccatgatgtgaggttcccaccacctgcaggctataataaagacataaat
gaaagcgatgaagtagaggtttattccagagcaaatgaaaaagaaccctgctgttggtgg
ttggctaaagtgagaatgataaagggtgagttctacgtaatagaatatgcagcctgtgat
gctacatacaacgaaattgtcacaattgagcgtttgagatctgtgaaccccaataaaccc
gcaacaaaagatacttttcataaaatcaaactggcagtccctgaagatttaaggcaaatg
tgtgccaaagaatctgcacataaggacttcaaaaaggcagttggagctttttctgtaaca
tatgattctgaaaaccaccagcttattattttgtcaatcaacgacgtaaccacaaagcgg
gccaacatgctgattgatatgcactttcggagtcttcgcaccaagttatccctgattctg
agaaatgaagaagccagcaaacagctggagagttctaggcaacttgcatcccggttccat
gaacagtttgtagtacgtgaagacttaatgggtttggccattggcactcatggtgctaat
attcagcaagccagaaaagtccctggagtgactgctattgatcttgatgaagatacttgt
acattccatatttatggagaggatcaagatgcggtgaaaaaggcaagaagttaccttgaa
tttgctgaagatgtcatacaagtcccaaggaatttagtaggaaaagtaataggaaaaaat
ggaaaactgattcaggagatagtggacaaatctggcgttgtaagagtgagaattgaggct
gaaaatgataaaaatattccacaagaagagggcatggtaccatttgtgtttgtaggaacc
aaggatagcatcactaatgcaactgttcttctggattatcatcttaattatttaaaggaa
gtggaccagctgcgtttggaaagattgcaaattgatgagcaactgcgacagatcggagct
acttccaggccccccccgaaccgcacggacaaggacaaagggtacatgacggacgacggg
ccgggcctcggccgcggcagccgcccctacaggaaccgcgggcacagccggcgtgggccg
ggctatgcttcgggaactaattctgaagcatcaaatgcttctgaaacagagtctgatcac
agagacgagctgagcgattggtcggcggccccggcggaggaggagcgggacaattacctg
cgccggggggacgggcggaggcgcggcggcggcgccagaggccaaggcgggagggggcgc
ggaggattcaaaggcaatgatgaacagtcacgaacagataaccgtcagcgtaactcaaga
gaggcgaaagggaggacagcagacgggtctcttgagaatacctcgagcgaaggcagccgg
ctgcgcgcgggcaaggagcggaaccccaagaaggagaagacggacggcgccgacgctcaa
cagccgctggtgaacggagtcccctaa
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