Lonchura striata (white-rumped munia): 110480136
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Entry
110480136 CDS
T05897
Symbol
ATG4A
Name
(RefSeq) cysteine protease ATG4A isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04136
Autophagy - other
lsr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110480136 (ATG4A)
04136 Autophagy - other
110480136 (ATG4A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsr01002
]
110480136 (ATG4A)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110480136 (ATG4A)
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110480136 (ATG4A)
Peptidases and inhibitors [BR:
lsr01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
110480136 (ATG4A)
Membrane trafficking [BR:
lsr04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
110480136 (ATG4A)
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110480136 (ATG4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
110480136
NCBI-ProteinID:
XP_021403563
LinkDB
All DBs
Position
4A:11485499..11497156
Genome browser
AA seq
406 aa
AA seq
DB search
MEAVLSRYENQITILSDYLEEFPETDEPVWILGRQHHLNTDKSKLLLDISARLWFTYRRK
FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWQWEKHKKQPEEYHRILRCFLD
RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE
DIKKMCWSPAQSSSVAHSSAHVHRSALGQNKNTAGLCPGWKPLLLIIPLRLGINHINPVY
IDAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIYLDPHTTQSFVDSEENGTVDDKSF
HCQQAPHRMKIMNLDPSVALGFFCKEECDFDNWCSLVQKEILKQQSLRMFELVQKHPPHW
PPFIPPTKPEVTTTGAGVGPLAVLLGSRVGLLSSRRSSTAGITGLS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgttttatctaggtatgaaaaccagatcactattttgtcagactacttagaa
gaatttccagaaaccgacgagccggtgtggattttaggaaggcaacaccacctaaacaca
gacaaatctaagttattgctggatataagtgctcgtctctggttcacgtatagaagaaag
ttttcacctattggaggcaccggtccctcgtctgacgcgggctggggatgcatgctgagg
tgtgggcagatgatgctggcccaggcactcatctgcagacatttaggaagagattggcaa
tgggaaaaacacaaaaaacaaccagaagaatatcacagaatcttacggtgctttctggat
agaaaagattgctgttattccatccaccaaatggcgcagatgggtgttggagaggggaag
tccattggagagtggtttggaccaaacacagttgctcaagtactgaagaagcttgcttta
tttgatgaatggaattcattagcagtttatgtatctatggacaatacagtggtcattgaa
gacatcaagaagatgtgctggtcccctgcccagagcagcagcgttgcccacagcagtgca
catgtgcacagaagtgctcttggccaaaacaagaacacagcaggactgtgcccaggctgg
aaacccctcttgctcattatccctctccggctagggattaatcacatcaatccagtgtat
attgatgcatttaaagaatgctttaagatgccacagtctttgggagcattaggagggaaa
cccaataatgcctattattttataggatttttaggcaatgagctgatctacttggaccct
cacaccactcagagttttgtagattcagaagaaaatggcacagttgatgacaagagcttc
cactgccagcaagccccacacagaatgaagatcatgaatttggacccttcagtagcttta
ggcttcttttgcaaagaagagtgtgattttgataactggtgtagtcttgtacaaaaggag
attctaaagcagcagagcctgcggatgtttgagctggtccagaagcacccaccccactgg
cctcctttcatacctccaaccaagccagaagtgacaaccacaggagcaggtgtgggacca
ctggctgtgctgctgggcagcagagtggggctcctcagcagcaggagatccagcacagct
ggaataactggcctttcctga
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