Lonchura striata (white-rumped munia): 110480170
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Entry
110480170 CDS
T05897
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04010
MAPK signaling pathway
lsr04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110480170 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
110480170 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110480170 (NFKB2)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
110480170 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
110480170
NCBI-ProteinID:
XP_021403606
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All DBs
Position
6:16345030..16352804
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AA seq
935 aa
AA seq
DB search
MAMLGLNGLLRPASSSPAGGRPRADMDEQFQPCLDGIDYDDFSFGSHMMEQKEPLMETVE
GPYLVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNYTGMARIEVDLV
THSDPPRVHAHSLVGKQCNEAGNCVTIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKQ
QKMRNRSRLLTEVELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQPVISDP
IHDSKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDF
SPTDVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSDSKQFTYYPVVEDKEEVE
RKRKKVLPQFPQHFGGGSHMGGAGGGAGGFGSGGGGNLSFPYSSGLTYNSIYSPGPHPVG
SYQGGVQMKGPEAEGPGSDRQAPAEDSMYCKELQKHAQLCQLWMLALARRNAHALLDYSV
TADPRMLLAVQRHLAASQDENGDTPLHLAIIHEQTAVIKQLIDIIVSIPHQQIINISNNL
QQTSLHLAVITKQPQVVQLLLQAHADPTLLDRYGNSLLHLALQTGDEEMLRTLLAHLGSA
APYLLCLPNFHGLLPVHLAVKAKSLACLDLLVRTGADVNAVERQSGRTPLHLAVDMENLN
MATHLVKKLGADINSRNFAGNTPLHLAAGLGSPTLTKLLLKAGADVLCENDEPLSLSSSE
ASSDTDTDPEEQEVAMDLGEPALAAEHITSSKLSTQGHWQAGHRQRRCHTSLDLTRSQKV
REILLQASQQGPEAELPTAPQPGKVLSLDSEAVQGLEQLLNQDCSGSDWIELAKRLGLCS
LVETYKDTPSPSVSLLRSYELAGGSLGGLLEALDSMGLHNAVRMLHKTEALEKLQSTELK
EDSAYGSESVEEEQAPTLALKPRGELPPSQQPQVH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgctggggctgaacgggttgctgagaccagcctcttcctccccggccggcggc
cggccccgcgccgacatggacgagcagttccagccctgcctggatgggattgactatgat
gacttcagttttggctcccacatgatggagcagaaggagcccctcatggagacagtggaa
ggtccctaccttgtcattattgaacagccaaagcagcggggtttccgatttcggtatggc
tgcgagggcccttcccatggggggctgccaggagcatccagtgagaaggggcgcaagacc
tatcccactgtcaagatctgtaactacacagggatggcccggattgaggtagatctggtg
acacacagtgaccctccccgtgtacatgcccacagcctggtgggcaagcaatgcaacgag
gccggcaactgtgtcacgatcgtgggacccaaggacatgactgctcagttcagcaacctg
ggtgtgctccatgtcaccaagaagaatatgatggagatcatgaaggaaaagctgaagcag
cagaagatgcgcaacaggagtcgtctgctgacggaagtggagctgcgtgagatcgagctg
gaggcaaaggagctgaagaaggtgatggacctgagcattgtgcggttgcgcttcaccgcc
tacctccgtgacagcagtgggaacttcacgctggctctccagcctgtcatctcggacccc
atccatgacagcaagtcccctggagcttccaacctgaagatctcacggatggataagaca
gcaggctctgtacggggaggagatgaagtctacttgctgtgtgataaagttcagaaagat
gacattgaggtgcgtttctatgaggatgatgagaacggctggcaggcctttggggacttt
tctcctacagatgtgcacaagcagtatgccattgtcttccgcacaccgccctaccacaag
cccaagatcgaccgacctgtcaccgtcttcctgcagctgaagcggaagcgaggaggggac
gtgagtgactccaagcagttcacctactaccccgtggtggaagataaggaagaagtggag
aggaagcgcaagaaagtcctgcctcagtttcctcagcactttggcggtggctcgcacatg
gggggcgccggcgggggggctgggggctttggctctggaggaggtgggaacctcagcttc
ccatactcctctgggctgacctacaacagcatctactcgcccggcccccacccagtgggg
agctaccaggggggtgtgcagatgaagggccccgaggcagaggggcctgggagcgacagg
caggcacctgcagaagacagcatgtactgcaaggagctgcagaagcacgcccagctgtgc
cagctgtggatgctggcgttagcccgtcgcaatgcccatgccctgctcgactactcggtc
accgccgacccccgcatgctgctggcagtccagaggcacctggccgcgtcacaggatgag
aacggagacacgcctttgcacctcgctattatccatgaacagacagctgtgatcaagcag
ctgattgacatcattgttagcatcccccaccagcagatcatcaacatctccaataacctg
caacagacgtcactgcatctggcagtcatcaccaagcagccccaggtagtccagctcctg
cttcaagcccacgccgacccaaccttgctggaccgctatggcaactccctgctgcacctg
gcactccagactggcgatgaggagatgctgaggacgctgctggctcacctgggctcagct
gccccttatctgctctgcctgcccaatttccatggcctcctgcctgtgcatttggctgtg
aaggcaaagagtttggcttgcttggatctgctggtcaggacgggagcagatgtgaatgca
gtggagaggcaaagtgggaggaccccactgcacctggctgtggacatggagaacctgaac
atggccacccacctggtgaagaagctgggagcagacatcaacagccggaatttcgccggg
aacacccccctgcacttggctgctggtctgggctcccccaccctcaccaagctgcttctt
aaagctggggcagatgttttgtgtgagaatgatgagcccttgagcctgtcctcgtcggag
gccagtagtgacacagacactgaccctgaggaacaggaggtggccatggatctgggggag
ccagccctggctgcagagcacatcaccagctccaagctctctacacaggggcactggcag
gcagggcacaggcagcgccgctgccacacgtccctggacctgactcggagccagaaggtg
cgggagatcctgctgcaggcctcccagcaggggcctgaggcagagctgcccactgccccc
cagccagggaaggtcctgtcactggacagtgaggcagtgcaggggctggagcagctgctg
aatcaggattgcagtgggtcagactggatcgagctggccaaacgcctggggctctgcagc
ctcgtggagacctacaaggacacaccctcgcccagtgtcagcctcctgcgcagttatgag
ctggcaggtggcagcctggggggactgctggaggcactggactccatggggctccacaat
gctgtgaggatgctccacaaaactgaggcactggagaagctgcaaagcacagagctgaag
gaagacagtgcctacggcagtgagtcggtggaggaggagcaggcgcccacactagccctg
aagccaaggggtgagctgccccccagccagcagccacaggtgcactga
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