Lonchura striata (white-rumped munia): 110480344
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Entry
110480344 CDS
T05897
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110480344 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
110480344 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
110480344 (PDLIM1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
110480344
NCBI-ProteinID:
XP_021403880
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All DBs
Position
6:15839461..15882955
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AA seq
327 aa
AA seq
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MGTHRIVLSGPGPWGFRLVGGRDFEQPLAISRVTPGSKAAIANLCIGDQIIAIDGVNTDN
MTHLEAQNKIKACTDELTLTVSRTEAKVWSPLVSEEGKTHPYKMNLASEPQEIKHIGSAH
NRSAVPFTAATASAPRVITAQYNSPAGLYSSENIQTFNSAVETKTSPGALEPTKPLDQHN
QTPGSIAIDRQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKA
PTTKVASSIGNAQKLPMCDKCGSGIVGMFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVG
DQIYCETHARERVTPPEGYEVVTVFPK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggggacgcaccgcatcgtgctctcgggccccgggccctggggcttccgcctggtgggc
ggccgcgacttcgagcagcccctcgccatctcccgggtgactccaggcagcaaagctgca
atagccaacttgtgtataggagaccagatcatagccattgatggagtgaatacagataac
atgacgcaccttgaggcacaaaacaaaatcaaggcttgcacagatgaactgactctgaca
gtcagcagaacagaggcaaaagtctggtcaccacttgtaagcgaggagggaaagacacat
ccttataagatgaatctggcctctgaaccacaggaaataaagcacataggaagtgcacac
aatcggagtgcagtgcccttcactgctgccacagcttctgcccccagggtgatcactgct
cagtacaacagcccagcaggcctctactcctcagagaacatccagaccttcaacagtgcg
gtggagacaaaaacgtcacctggggctctggagcctaccaagcctttagatcagcataac
cagaccccaggcagcattgccatagacagacaatctgaggtttacaagatgctgcaggag
aatcaagagtcaaatgagccacccagacagtcggcttcgtttcttgtgttgcaagagatc
ttggagtcggaggagaaaggagaccctaccaaaccgtctggatttaggagcgtcaaagcc
cctaccacaaaggtggcctcatcgattgggaatgcccagaagctgcccatgtgtgacaag
tgtggatctggcattgtagggatgttcgtgaagatccgggacaagcagcgtcaccccgag
tgctacgtgtgcagcgactgtggcaccaatctcaagcagaaaggacacttctttgtggga
gaccaaatctactgcgagacgcacgcgcgggaacgggtgactcccccggagggctacgag
gtggtcactgtcttcccaaagtaa
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