KEGG   Lonchura striata (white-rumped munia): 110480344
Entry
110480344         CDS       T05897                                 
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110480344 (PDLIM1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:lsr04990]
    110480344 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:lsr04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   110480344 (PDLIM1)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 110480344
NCBI-ProteinID: XP_021403880
LinkDB
Position
6:15839461..15882955
AA seq 327 aa
MGTHRIVLSGPGPWGFRLVGGRDFEQPLAISRVTPGSKAAIANLCIGDQIIAIDGVNTDN
MTHLEAQNKIKACTDELTLTVSRTEAKVWSPLVSEEGKTHPYKMNLASEPQEIKHIGSAH
NRSAVPFTAATASAPRVITAQYNSPAGLYSSENIQTFNSAVETKTSPGALEPTKPLDQHN
QTPGSIAIDRQSEVYKMLQENQESNEPPRQSASFLVLQEILESEEKGDPTKPSGFRSVKA
PTTKVASSIGNAQKLPMCDKCGSGIVGMFVKIRDKQRHPECYVCSDCGTNLKQKGHFFVG
DQIYCETHARERVTPPEGYEVVTVFPK
NT seq 984 nt   +upstreamnt  +downstreamnt
atggggacgcaccgcatcgtgctctcgggccccgggccctggggcttccgcctggtgggc
ggccgcgacttcgagcagcccctcgccatctcccgggtgactccaggcagcaaagctgca
atagccaacttgtgtataggagaccagatcatagccattgatggagtgaatacagataac
atgacgcaccttgaggcacaaaacaaaatcaaggcttgcacagatgaactgactctgaca
gtcagcagaacagaggcaaaagtctggtcaccacttgtaagcgaggagggaaagacacat
ccttataagatgaatctggcctctgaaccacaggaaataaagcacataggaagtgcacac
aatcggagtgcagtgcccttcactgctgccacagcttctgcccccagggtgatcactgct
cagtacaacagcccagcaggcctctactcctcagagaacatccagaccttcaacagtgcg
gtggagacaaaaacgtcacctggggctctggagcctaccaagcctttagatcagcataac
cagaccccaggcagcattgccatagacagacaatctgaggtttacaagatgctgcaggag
aatcaagagtcaaatgagccacccagacagtcggcttcgtttcttgtgttgcaagagatc
ttggagtcggaggagaaaggagaccctaccaaaccgtctggatttaggagcgtcaaagcc
cctaccacaaaggtggcctcatcgattgggaatgcccagaagctgcccatgtgtgacaag
tgtggatctggcattgtagggatgttcgtgaagatccgggacaagcagcgtcaccccgag
tgctacgtgtgcagcgactgtggcaccaatctcaagcagaaaggacacttctttgtggga
gaccaaatctactgcgagacgcacgcgcgggaacgggtgactcccccggagggctacgag
gtggtcactgtcttcccaaagtaa

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