Lonchura striata (white-rumped munia): 110480464
Help
Entry
110480464 CDS
T05897
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lsr00535
]
110480464
Proteoglycans [BR:
lsr00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
110480464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
LRR_NXF1-5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
110480464
NCBI-ProteinID:
XP_021404074
LinkDB
All DBs
Position
4A:complement(7812505..7813779)
Genome browser
AA seq
424 aa
AA seq
DB search
MLFLVVFIFTCAAKAGLSLNVSNSCPSMCKCTPEETILCNRAGLKTLPGEIAPSTISLNL
SNNYLRSLNTNTFRNLTFLHNLWLDGNNLTFLTPGTFDALSRLQELHLSRNSRLTHLHAN
TFRGLLNLISLDLSHCNIFEIHPLLFSHLPSLERLDLASNNMRYVPQAFRNLSSLTSLSL
EGNHIEAIGRDSLKDLETLYDLNLRKNRIWIIQNGAFAKLLRLGTLNLGHNFITDLPNQL
FEGLTQLKTMHLEANRITAVDCTFRQLLNLRNLYLNNNQISSISDSAFLHLNKLHFLHLS
RNNLSSLPARLLSELPGLRYVLLSHNPWRCDCSALWLWRSPHRALLQGLDCAFPGPANAT
APEEPRPGHCPTPLPPAAEDQCGAAAASAAPRPRGLPGQLVLLALACHAWHNQRGWVLYG
NKGI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgctctttctcgttgtatttatatttacttgtgcagcaaaggctgggctgagtctgaat
gtctccaattcatgcccaagcatgtgcaaatgtacacctgaagagaccatcctctgcaac
agagctggactgaaaacccttcctggagaaatagcaccatccaccatctctttaaacctc
tccaacaattatttgcggagtctcaacaccaacaccttcagaaacctgactttccttcac
aacctctggctagatgggaacaatctgaccttcctgaccccaggaactttcgatgctctc
agcaggctgcaagagctgcacctcagcaggaactcacgcctcacccacctgcacgcaaac
actttcagaggactattaaacctcatcagcctggatttgtcccattgtaatatcttcgaa
atccacccacttctattttcacacttgccttctttagaaaggcttgatttagcctccaat
aacatgaggtatgttccacaagcctttaggaacctctccagcctcacaagtctgtcactg
gagggcaatcacatagaagccatcggcagagattccctgaaggacctggaaactctgtac
gacctgaatctcaggaagaatcggatatggatcattcaaaacggagcttttgcaaagctt
ctcagactgggcacgttaaatttaggacacaacttcatcactgatttgcctaatcagctt
tttgaaggattgacccagctcaagaccatgcacctcgaagccaacagaatcactgccgtc
gactgcaccttcagacagctgctcaacttgaggaacttgtacctgaacaacaaccagatc
tcctcgatctcagactctgcttttctacacctgaacaagctgcacttcctccacctgagc
agaaacaacctcagctccctgcccgcgcgcctgctctccgagctgcccgggctcaggtac
gtgctgctgtcccacaacccctggaggtgcgactgcagcgcgctctggctctggcgctcc
ccgcaccgggcgctgctccaggggctggactgcgccttccccggccctgccaacgccacg
gcgcccgaggagccgcgcccgggccactgccccacaccactgcccccggccgccgaggac
cagtgcggggcggccgccgccagcgcggcccccaggccccgcggcctgcccgggcagctc
gtcctgctggcactcgcctgccacgcgtggcacaaccagaggggatgggttttatatgga
aataaagggatttaa
DBGET
integrated database retrieval system
