Lonchura striata (white-rumped munia): 110480489
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Entry
110480489 CDS
T05897
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110480489 (ZC3H12B)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110480489 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
110480489
NCBI-ProteinID:
XP_021404117
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All DBs
Position
4A:complement(6615387..6639782)
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AA seq
834 aa
AA seq
DB search
MTAWSMVGKLKMEKRHSREDRNVEQDAGECSAESEEWTSSESDPEQPYFRGSTQWREKEV
STKPHRPLCRSPCLDRPSFSQSSITQDLKLDECKTNLDKEYQAKMDFALKLGYAGDQIQA
VLNKLGADALINDVLAELVRLGNKSESEGQSTASSTTGTLVSRGPCPKEIASPELSLEDE
VVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQS
RPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYR
DLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQPCP
YGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSSKGE
ISSEVKRIAPKRQSDPSIRSVAVEPEEKLSAARKSEASSVPSLVSALSVPTLPPPKSHAA
GALNTRSASSPVPGSSQFVHQKSSLEHMSSVQYPPILVTNSHGTSVSYIDQYPKYESLGD
HGYYSLLSDFSNLSISSIRNSDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYNDLY
LGVADASPEDNVKSHRLPSKNRLQPFPHGYHEALNRGQSYGTEEPKQSLRKQSVSHLGLH
AQHPVVGARSSCPGEYPVPQNVHPSAAQPSRALVMTRMDSISDSRLYESNPTRQRRPPLC
REQHASWDPLPCASDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGICGEP
REPHIIPEHQYQTYKNLCNIFPPSVVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtagggaagctgaaaatggagaagaggcactccagagaagac
agaaatgtggaacaagatgcgggggaatgcagtgctgaatctgaggaatggacgagctca
gaaagtgaccctgagcaaccatacttcagaggcagtactcagtggagagaaaaggaggtt
tccaccaaaccgcatcggccgctctgccggtccccgtgtctggatcgcccaagtttttca
cagagcagtatcacacaagacttgaagctagatgaatgcaaaacaaatttggacaaggaa
taccaagctaaaatggattttgctttaaagcttgggtatgcgggagatcagatccaggct
gtactgaataagttaggagcagatgcactcatcaatgatgttctagcagagcttgtgaga
cttggcaacaaaagtgaatcagagggacaaagcactgccagcagtaccactggtactctg
gtgtcaagaggcccttgcccaaaggaaatagcaagccctgaattgtcactggaagatgaa
gtggtggataacagtgataacttgaggccaattgtcattgatggaagcaatgttgctatg
agccatgggaacaaagaaggattttcctgccggggaattcaactagctgttgattggttt
ctggaaaaaggacataaagatatcactgtgtttgtacctgcatggagaaaagaacagtct
cgacctgatgcaccaattacagatcaagaaatcttacgtaaattggagaaagaaaaaatt
cttgttttcaccccatctcgaagagttcagggaagaagagtagtttgctatgatgatcga
ttcatagtaaaacttgctttcgactcagatggcatcattgtgtcaaatgataactatcga
gatcttcagaatgaaaaaccagaatggaagaagttcattgaggagcggctgctaatgtat
tcttttgtgaatgacaaatttatgcctccagatgatcctttaggacgtcatggtccaagc
cttgaaaatttcttaagaaaaaggccagttattcctgaacataagaaacaaccgtgtcct
tatggtaaaaagtgcacctatgggcacaaatgtaaatattaccacccagaacgtgcaaac
cagcctcaaaggtcagtagcggatgagcttcgaataagtgccaaattatctgctgtgaaa
actatgagtgagggagccttggccaaatgtggcacagggccatccagctccaaaggagaa
atcagttctgaagtgaaacgcattgccccaaaacgtcagtcagatccaagcattaggtca
gtagctgtggagcctgaggaaaagttatcagcagcccggaagtccgaggccagctctgtc
ccgtctctggtttctgcattaagtgtaccaacgctccctccaccaaaaagccatgcagct
ggtgcattaaatactcgttctgcaagcagtccggtgccaggttcctcacagttcgtacat
cagaaatcctcactggaacatatgtccagtgtgcaatatcctcctatactagtcaccaat
agccatggcacctcagttagctatattgaccagtatcccaaatatgagtcactgggggac
catggctattactccttactcagtgatttctccaacttaagcataagtagtatccgtaac
tcagattattacggggctgatatggaccaggggatgtattctagaaactcaagcccctgt
cctgacaattgcttaagccatacaagtaatgattcttattcctcttacaatgacttgtat
ctgggtgtagcagatgccagtccagaagacaatgtgaagagccacagactgccatcgaaa
aatcgtcttcagcctttccctcatggttaccatgaagccttaaatagaggtcagagttac
ggaactgaagagcctaagcaatcccttcgcaaacagtcagtttcccacttaggcctacat
gcccagcatccagttgttggagcacggtccagttgtccaggagaataccctgtgcctcaa
aatgttcatccatcagctgcacaaccaagccgtgccttggtgatgacaagaatggacagc
atttctgactcacggctttatgagagtaaccctacaaggcagagacgaccacctctgtgt
cgagagcagcacgccagctgggatccattaccgtgtgcgtcagactcgtacacttaccac
tcatatccactgagtaacaacctcatgcagccatgttatgaacctgtcatggtaagaagc
atgcctgaaaagatggaacaactctggagaaatccttggattgggatatgtggtgagcca
cgggaacctcatatcatcccagaacatcagtatcaaacatacaagaacctctgcaatatt
ttccctccaagcgttgtcctttctgtgatggaaaagaatccccacatgacagatgcacaa
cagctggcagctatgattgttgccaaattaagaacggggcgttag
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