KEGG   Lonchura striata (white-rumped munia): 110480506
Entry
110480506         CDS       T05897                                 
Symbol
CUL4B
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03420  Nucleotide excision repair
lsr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110480506 (CUL4B)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110480506 (CUL4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsr04121]
    110480506 (CUL4B)
   03400 DNA repair and recombination proteins [BR:lsr03400]
    110480506 (CUL4B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsr04147]
    110480506 (CUL4B)
Ubiquitin system [BR:lsr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     110480506 (CUL4B)
DNA repair and recombination proteins [BR:lsr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      110480506 (CUL4B)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      110480506 (CUL4B)
Exosome [BR:lsr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110480506 (CUL4B)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 110480506
NCBI-ProteinID: XP_021404173
LinkDB
Position
4A:complement(9176140..9200712)
AA seq 888 aa
MFPTGFSSPNPPAAAQEVRPATDGNTSSSSSCKKRKLNNSSNSNSEKEEFDSISSCTSSP
SKNTSSSSSSVITTSSCSSSGVASSNHHLQKKLRFEDSVDFIGLDVKMAEESSSSSSSPA
ASSQQQHQQQLKNKSLLISSVAVGHHANGLTKAASSTVSSFANSKPGSAKKLVIKNFKDK
PKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICE
DHIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIW
DMGLELFRTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSF
EHRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPLIATVE
KQLLGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTI
VINPEKDKTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAK
YVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDA
EKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMG
YWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQV
SLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLTKSPKGKDVEDG
DKFTCNDDFRHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLS
HNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
NT seq 2667 nt   +upstreamnt  +downstreamnt
atgtttcccacaggtttctcttcccccaaccccccagctgcagcccaggaggtcagacct
gccactgatggtaacactagcagcagctcctcctgcaagaagagaaagctaaataacagc
agcaacagtaattccgaaaaagaagaatttgattccatttcctcctgcacctcttctcct
tccaaaaacacctcctcatcatcttcctctgtcatcaccacttcctcgtgctcctcctca
ggggttgcttcctccaaccatcacctccagaagaagctgcgctttgaggactccgtggat
tttattggactcgatgtgaagatggctgaagagtcttcttcctcctcctcctctcctgct
gcctcttctcagcagcagcaccagcaacagcttaaaaataaaagccttttaatttcgtca
gtggctgtggggcaccatgcaaatggcctgaccaaagctgcctcctctactgtttccagt
ttcgccaacagtaaacctggctctgccaagaaattagtgatcaagaactttaaagataaa
cccaaattgcctgaaaattacacagatgaaacctggcaaaaactgaaagaagctgtagaa
gctatccagaacagtacttcaattaagtacaatttagaagagctctatcaggctgttgaa
aatctctgctcctacaagatctctgcaaatttgtacaaacaattgaggcagatctgtgaa
gaccacattaaagcacaaattcaccagttcagagaggattcattggatagtgtccttttt
ctgaagaaaatagacaaatgttggcaagatcactgcagacaaatgattatgattagaagt
atctttctgttcttggatcgaacttatgtactgcagaattcaatgctgccatctatttgg
gatatgggactagaattgttcagaactcatataatcagtgatcagaaggtccagaacaaa
actattgatggcattcttctgctgatcgagagggaaagaaatggtgaagctatcgacagg
agtttgctgcgaagccttctgagcatgctttctgacttgcagatctaccaggactctttt
gaacatagattcttggaagagactaatcgcctgtatgcagcagagggacagaggcttatg
caggaacgagaggttccagaatatcttcaccatgtcaacaagcgcttggaagaagaagca
gacagaataatcacgtatttagatcagagcacacagaagccactaattgctactgtagaa
aagcaacttctaggtgaacatttaacagccattcttcagaaaggtctaaatcaccttctt
gatgaaaaccgaattcaagacctttctcttctgtatcagttattcagtcgtgtgagaggt
ggagtgcaggttctcttgcagcactggattgaatacataaaggcatttggtagcaccata
gtaattaatcctgaaaaagacaaaaccatggtccaagaacttcttgattttaaagacaag
gttgaccatattattgatgtttgctttctcaagaatgagaagtttgtaaatgccatgaaa
gaagcctttgaaacattcattaacaaaagaccaaataagccagctgaactcatagctaaa
tatgtagattcaaagcttcgtgcaggcaacaaagaagctactgatgaagaacttgaaaaa
atgctggataaaattatgattatatttagattcatatatggaaaagatgtctttgaggcc
ttttataaaaaagatctagcaaagagactattagttgggaagagtgcatcagtagatgct
gaaaaatctatgctttccaaactcaaacatgaatgtggagctgctttcaccagcaaactt
gaaggaatgtttaaagatatggagctttcaaaagacataatgatacaattcaaacagtat
atgcaaaatcagaatgtccctggcaacattgaactaacagtgaatattctgactatgggt
tactggccaacctacgtgcctatggaggtccacctgcccccagagatggtaaaactgcag
gagattttcaagaccttttatttaggaaaacacagtggtaggaaacttcagtggcagtca
acactaggacactgtgtactaaaagcagaattcaaagagggcaaaaaagaacttcaggtc
tccttgttccagacactggtgctgctcatgtttaatgaaggagaggagttcagtttagag
gagataaaacaagccactgggatagaggatggagagctgagaaggacacttcaatctctg
gcttgtggcaaagccagagtactgactaaaagccccaaaggcaaagatgtggaagatggt
gataaattcacatgtaatgatgatttcagacataagctcttcaggataaaaatcaaccaa
attcagatgaaagaaacggtggaggagcaggcaagcactacagagagggtgttccaggac
cggcagtaccagatcgatgccgccattgtgcgcatcatgaagatgcgcaagacgctgagt
cacaacctgctcgtgtcagaggtctacaaccagctgaaattcccagtcaagcctgctgac
cttaagaagagaatagaatccttgattgacagggactacatggaaagagataaagaaaac
ccaaatcagtacaactatattgcataa

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