Lonchura striata (white-rumped munia): 110480659
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Entry
110480659 CDS
T05897
Symbol
SEC24C
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110480659 (SEC24C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110480659 (SEC24C)
Membrane trafficking [BR:
lsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110480659 (SEC24C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
110480659
NCBI-ProteinID:
XP_021404447
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Position
6:complement(15345806..15384452)
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AA seq
1173 aa
AA seq
DB search
MSVNQQAHTGPPYGQPQPGYQGYQQPAYGGQSLPGVPQAQYGAYNGPVPGYQQPVPPQGY
FPSLGFPSKGSPVSLNSDTSSLAPNFIGSLRAPPTSGAPPPASGASHPSGHLAYSQFDHG
DVQNGIPASAAPVQRPPASQPFLPGSAPTPVSQISTFQQYGPPPASVQQLRNHMAGMTIG
GTAASAPPPAGLGYASVPPVSGSFSATGSGLYTPYSASQGPPLTSVSQGLPLAQPPFPGQ
TISTQHLAAQVPGFTPPPPSTGVGPSSYPPTTGAPRPPAMPGPPLPGQTVAGPPSSQPNH
ISSPPPPSTMAGLHPGPPMSGLHGPPPPTHPPQPGYQMQQNGSFGQMRGPPPNYGGAYPG
APNYGSPPGPPPPPKRLDPDSIPSPQLNELPPQQKPRHRIDPDAIPSPIQVIEDDRNNRG
SEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQSQVPLAAVIKP
LAALPPEETVPYLVDHGESGPVRCNRCKAYMCPFMQFIEGGRRFQCCFCSCVTEVPPHYF
QHLDHTGKRVDFYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAVKSGLVR
LICEELKSLLDYLPREGNMEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFV
PLLDGFLVNVNESRTVIASLLDQIPEMFADTRETETVFAPVIQAGLEALKAAECAGKLFI
FHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTSFYNNLAKDCVAQGCCVDLFLFPN
QYLDVATLGVVPYQTGGSIYKYAYFQLETDQYRFLNDLRRDVQKEVGFDAVMRVRTSTGI
RATDFFGAFYMSNTTDVEMAGLDCDKTITVEFKHDDKLSEDSGALLQCALLYTSCAGQRR
LRIHNLSLNCCTQLADLYRNCETDTLINYLAKYAYRGVLSSPVKTVRDALINQCAQILAC
YRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGPEVTTDDRAYVRQLVTSMDVA
ETNVFFYPRLLPLTKADVDSDSLPAAIRNSEERLSKGDIYLLENGLNIFVWVGVNVQQGL
IQNLFGVSSFSQISNALSTLPVLENPFSKKVRAIVDMLQGQRSRYMKLIIVKQEDKLEML
FKHFLVEDKSLSGGASYVDFLCHMHKEIRQLLS
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaaaccagcaagctcacacggggcctccttatgggcaacctcagcctggatat
cagggataccagcagcctgcctacggaggacagtcattgccaggggttcctcaggcgcaa
tacggagcttataatgggccggtgccaggatatcaacagccagtccctccacaaggttac
tttccttccttggggtttccttcgaagggctctcctgtatctctcaactctgacacttct
tctcttgcacctaatttcataggttcattaagagccccgccaacatctggagctccccct
ccagcctctggagcatctcatccttctggccacttggcatacagtcagtttgaccatgga
gatgtgcagaatggaattccagcctcagcagctccagtgcagaggccacctgcttctcag
ccgttcctgccaggctcagcacccacgcctgtcagccagatatctacgttccagcaatat
gggccccccccagccagcgtgcagcagctcaggaatcacatggcagggatgacaattggt
ggtactgcagcctctgctcctcccccagctggactgggctatgcatcggttcctccagtc
tcaggaagctttagtgcaacaggatctggtctctacacaccttacagtgcaagccaagga
ccccctcttaccagtgtgtctcagggtcttcctttggcacagcctccgtttcctggtcag
acaatatcaactcagcacctggctgctcaagttcctggttttaccccacctcctccttct
acaggggttggaccttcctcttaccctcctaccacaggtgctccaaggccacctgccatg
ccaggcccaccactgcctgggcagacagttgctggaccaccatcatcccagcctaatcat
atatcctcaccaccacctccatcaactatggcagggctgcaccctgggcctcccatgagt
ggtctccatggaccacctcctcccactcatcctcctcagccaggataccaaatgcagcag
aatggttcctttggacagatgaggggtcctccaccaaactatggaggagcctatccagga
gcaccaaattatggaagtccgcctggaccaccacctccaccaaaacgcttggatccagat
tccattcctagccctcaacttaatgagctgccaccccagcagaaacccaggcacagaata
gatccagatgcaattcctagtccaattcaagtgattgaagatgacagaaataaccgtgga
tcagaaccatttgtcactggagtgagagggcaggtcccacctcttgttactacaaatttc
ttggtcaaggatcaaggtaatgcaagcccccgctacatcagatgcacatcttacaatatt
ccctgcacgtctgacatggccaaacaatcccaagttcccctggctgccgtcataaagccg
ctggctgctctgccgccggaggagactgttccttatttggtagaccatggagaatcgggt
cctgtccgatgtaataggtgcaaagcttacatgtgcccttttatgcaattcattgaaggt
ggaaggaggttccagtgttgtttctgcagctgtgtcactgaggttccacctcactacttc
caacatttggatcacactggaaagcgagtagatttctatgaccgacctgagttatcactg
ggatcatatgagtttctagcaacagttgactattgcaagaataacaagtttcctagtcca
cctgctttcatttttatgattgatgtatcttacaatgctgtgaagagtggcttagtgagg
ctaatatgtgaagaattaaagtcactcctagattatctgcccagggaagggaacatggag
gaatcagccattcgagtaggctttgtcacctacaacaaagttctacacttctataatgtg
aagagctcactggcacagccgcaaatgatggtggtctcagatgtggcagatatgtttgtg
ccactccttgatggttttctggtgaatgtgaatgaatccaggacagttattgccagttta
ctggatcagattccagaaatgtttgcagacacaagagaaacagaaactgtttttgcacct
gtgattcaagcagggctggaggcgctgaaggcagctgagtgtgctggcaaactcttcatt
ttccacacctctctgcccattgcagaggctccaggaaagttaaagaacagggatgatagg
aaactgatcaacacagataaggagaagactttgtttcaaccacagacgagcttttacaac
aacttggccaaggactgtgtggcccagggctgctgtgtggatctgttcctgtttccaaac
cagtatttggatgtggccacactgggtgtggtaccttaccagacaggaggctccatttat
aagtatgcgtatttccagctggagacagaccagtacagattcctgaatgacttgaggagg
gatgtccagaaagaagtgggatttgatgctgtaatgagagtgcgcacaagcacaggtatt
agagcaacagacttttttggagctttctatatgagcaacacaactgatgtagagatggca
ggtctggactgtgataaaacaatcacagtggaattcaagcatgatgataaattgagtgaa
gatagtggtgcactgcttcagtgtgctctgctgtatacaagttgtgcaggacagcgacga
ctccgcattcacaatctctccttaaactgctgcacgcagcttgctgacctctatcggaac
tgtgagactgacaccctcatcaactacttggctaagtatgcatatcgtggagtcctcagt
agtccagtgaagactgtacgagatgcactcatcaaccagtgtgcccagatcctagcctgc
tatcggaagaactgtgctagtccctcttctgctggccagctcatcctccccgaatgcatg
aagctgcttcctgtgtacttgaactgtgtgttgaagagtgacgtacttcagccgggccca
gaggtcacaacagatgaccgtgcctacgtccgtcagttagtgacgtccatggatgtggcc
gaaacaaatgttttcttttatcccaggcttttgcccctgaccaaagcagatgttgacagt
gattccttgccagcagccattcggaactccgaggaacgtctctccaagggtgacatctac
ctgctggagaacgggctgaacatctttgtgtgggtgggagtcaacgtgcagcaaggcctg
atccagaacctctttggagtgtcatccttcagtcaaattagcaatgccttgagtaccctg
ccagtcttggaaaaccccttttcaaagaaagtgcgagctattgttgatatgcttcaaggg
cagagatcccgctacatgaagttgataattgtgaagcaagaagataagctggaaatgctg
ttcaaacactttctagtggaggacaagagcctgagtgggggggcttcctatgtggacttc
ctgtgtcacatgcacaaggagattcggcagctactgagctag
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