Lonchura striata (white-rumped munia): 110480685
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Entry
110480685 CDS
T05897
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110480685 (SMC5)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
110480685 (SMC5)
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
ATG16
AAA_29
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
110480685
NCBI-ProteinID:
XP_021404481
UniProt:
A0A218U928
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Position
Z:9677854..9716981
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AA seq
1058 aa
AA seq
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MATAREKGKVVKRGGSKPTFVLGSIVRIFMKNFLTYNLCEVHPGPNLNLIVGGNGTGKSS
IVCAICLGLAGKPSFLGRADKVSLFVKQGCLKGIVEIELFKSPDNILITREIHVVNNTSV
WFINGKPATLKMVEEQIAALNIQVDNLCQFLPQDKVGEFTKLSKTELLEATEKSIGSPEM
YQFHCELKNFREKERELENLCREKTTSLEKMKQRVERYKQDVERYHECKRHVDLIEMLKK
KRPWVEYENVREQHEEVKQCRNQVKKELKCLKKMQQPWTKKIQEAEENLKNLDMKTKDNT
AETRNISKKCKDKQDALERKDKLIEEINQAFRMKKDEEANRQKKLYQTQKIIEEWQNELD
TNAVCENLQPQIDDVNTELKKLREERANTDNDISDLRAEKNNLEREAKRIIDRLGQLNNI
MHMKEENLKMRFQDTHSALMWLRNNKDKFKKRICEPMMLEINVKDSRHAKYIENHISSND
MRAFVFECQEDMETFLAEVRDHQKLRVNAVCAPDESCAENLPSRPIEELHQYGFYSYLRE
LFDAPPPVMSYLCYQYHVHNVPVGTQKTRDMIERVIQEANIRQMYTMEEKYVIKISAYTK
QKISSNICLQEAQYLTSSVDTEERGQLESQQQDISSTLKSLDARLTALFDRQKLLDHKDN
KLRQEKKELLERGNRRRQLESKIAVKYDSLRQLEQDAIDLEKEFQLANVKIKEINKQKAE
LVTELMHLIERIVPLNIEKVNLAFQMTRVTAEKNRLQSEYKAGTEQLRAAQQRFHELDNR
KHLLYEKCMELMKQGRHVCRLGPDQDFPKEFQVAFQTLPNTLEEIDAFLNEEKTRASCFT
GLSASVVEEYNKQTQEIQQLTEYLEEKKNELNNYKQNISQVKEKWLNLLKVMIEQINGKF
SKFFSSMQCVGEVDLHMENEEEYEKYGIRIRVKFHSSTELHELTPYHQSGGEKTVSTMLY
LMALQELNRCPFRVVDEINQGMDQMNQRRVFEMVVETACKNRTSQYFLITPKLLQNLTYN
DKMTVLFVYNGPFMLDTYSWNIKRFKRRQQYLSSMMES
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcgcgggaaaagggcaaggttgtgaagcgtggcgggtccaagcccaccttc
gtactgggttccatcgtcaggatcttcatgaagaactttctaacatacaatctctgtgaa
gtacatccagggcccaacctgaacctgattgtaggtggtaatggcacaggcaagtcaagc
attgtttgtgctatctgcctgggactggctggaaaaccttctttcctagggcgagctgat
aaggtcagtctgtttgtgaagcaggggtgcctgaaaggcatagtggaaattgaactgttt
aagtcaccagacaatattcttattacacgtgagattcatgtggttaacaacacatcagtg
tggtttatcaacggaaaaccagcaaccctgaaaatggtcgaagagcagattgcagcctta
aacatccaggtggacaatttgtgccagtttcttcctcaggacaaagttggagaatttaca
aaactgagtaagactgagttgctcgaagccactgaaaaatccattggttctccagaaatg
taccagtttcattgtgaactgaaaaatttcagagaaaaggaaagagaactagagaacttg
tgcagagaaaaaaccacctcattagagaaaatgaaacagcgggttgaacggtacaagcaa
gatgttgaaagataccatgaatgcaagcgccatgtagacttaatagagatgcttaagaag
aaaaggccatgggtggaatatgaaaatgttcgtgaacagcatgaagaagtgaaacagtgc
cgaaaccaagttaagaaagaactgaagtgtctgaaaaaaatgcagcaaccatggacaaaa
aaaatccaagaagctgaagaaaatttaaagaatttggatatgaaaaccaaagataatact
gctgaaaccagaaatatttccaagaaatgcaaagataaacaagatgcattggagaggaaa
gataaactgattgaagaaattaatcaagcgttcagaatgaaaaaagatgaagaagcaaac
aggcagaagaaactataccaaacccaaaaaataatagaggagtggcagaatgagctggat
acaaacgcagtctgtgagaatcttcagccacaaattgatgatgttaatactgagctgaaa
aaattacgagaagagagggcaaatactgataatgatatcagtgatctaagagcagaaaaa
aacaacctagagcgggaagcgaaaagaataattgatcgccttggacaacttaataacata
atgcatatgaaggaagagaaccttaaaatgagatttcaagacacacactctgctcttatg
tggctaagaaacaacaaagacaagtttaaaaaaagaatttgtgaacccatgatgcttgaa
atcaatgtgaaagacagtagacatgcaaaatatattgaaaatcacatttcatcgaatgac
atgagggcttttgtttttgagtgtcaagaagatatggagacatttctggcggaggtgcgt
gatcatcagaaactaagagtgaatgctgtatgtgcacctgatgaatcatgtgctgaaaat
ttgccttcaagacctattgaagaattacaccaatatggattttattcatatttacgagag
ttatttgatgctcctcctcccgtgatgagttacctttgttaccagtaccatgttcataat
gttcctgtgggaacacagaagaccagagacatgattgaaagggtcatacaggaagccaat
atcaggcaaatgtatacaatggaagaaaaatatgttattaaaatatctgcttacacaaaa
caaaagatctctagtaacatatgcttgcaagaggcacagtatctcactagttcagtagat
acagaagaaagaggacaattggaaagccagcaacaggacatcagtagtactttaaagtca
ctggatgcacgtttgactgcattgtttgacagacagaaacttctggatcacaaggacaat
aagctcaggcaagaaaagaaggagcttttagagagaggaaaccggaggaggcagttggaa
tcaaaaattgctgtgaaatatgatagtttaagacagctggaacaagatgctattgacctg
gagaaggaatttcagctggcaaatgtaaagatcaaagaaataaataaacaaaaagcagaa
cttgttactgaactgatgcatctcattgagaggattgtaccattgaacatcgaaaaagta
aatttggcttttcagatgaccagagtgactgctgagaagaacagactacagtcagagtac
aaagcaggaactgaacagctaagagctgcacagcaacgttttcatgaactggataatagg
aagcatcttctttatgagaagtgcatggaattgatgaaacaaggtcgacatgtctgtaga
ttgggtccagatcaagattttccaaaagaatttcaagttgcttttcagactcttccaaac
acattggaggaaattgatgcttttctgaatgaagagaaaaccagggcttcctgtttcaca
ggcctcagtgcttcagttgttgaagaatacaataagcaaacacaagaaatacagcagttg
acagaatatctagaggaaaagaaaaatgagttgaataactataagcaaaacatatcacag
gtcaaagaaaagtggctaaacctcttgaaagtgatgattgaacaaattaatggaaagttc
agtaagttttttagttctatgcagtgtgttggtgaagttgatcttcatatggaaaatgag
gaagagtatgagaagtatggaattcgcattagagtcaaattccacagtagcactgaactt
catgaattgactccataccatcagagtggaggtgagaaaactgtttccactatgttatac
ctgatggctctgcaagaactcaacagatgtcctttcagggttgttgatgaaataaatcag
ggaatggatcaaatgaatcagagaagagtttttgaaatggttgtggaaactgcttgtaaa
aataggacatctcagtacttcctcattacaccaaagctcctacagaatctcacttataat
gacaagatgactgtgctgtttgtctacaatggaccttttatgctggacacatacagttgg
aacataaaacgcttcaagagacggcaacagtacctttcaagcatgatggaatcttaa
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