Lonchura striata (white-rumped munia): 110480703
Help
Entry
110480703 CDS
T05897
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110480703 (ZSWIM8)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
110480703 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
110480703
NCBI-ProteinID:
XP_021404519
LinkDB
All DBs
Position
6:complement(15240189..15295121)
Genome browser
AA seq
1822 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPTP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSSTDKKNSFCWVKAIQQRSCRLQCAESACEAGRTHSQEAGGQCVQPGDRLRPS
PQEPAVRPKELTGKRKVVSETPQRVLRRLSAEGDKAVYKTAVSKAKLPVSKGLTSKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFTESPLSRSYRDAFEEDGGVYFSEG
PEPTLRSSSMSKKLSKGPVGEMGSGDDDLPSADENSGGVSLKPEEVGENGAAGGGDDGEE
EDDYQVYYLNPQEVAKEDDDKAEGGIEEEQDIFAGIKPLEQENRMEILFACAEALYAHGY
SNEACRLTVELARDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERLEYHNLAFRIGMFALELQRPPASTKALEVKLAYQESEIAALLKKIPLGTNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPTVANQKSPSKHAAQSAAAIQQLPGTSVTQQAAVSTAVQSSPENFVEK
STQESSQRSPCEPASEATVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASID
SSAPETTSDSSPTLSRRPLRGSWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGA
RAKTVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSS
GGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILV
ECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQ
DNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQREGATGCSASGAR
AASEAARGLADSRVTSEPTTVTVAAAVTAAATVMPVISVGSTMYQQHTVAGPAMAHTHTQ
GLHPYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTAPS
LAATAVSFPGVPVPSVTQIAVHPYHSETGLSLSSNVALGSVHAGSTFPAIQGASLTTLSS
QPNSLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPP
YTEDVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRTP
AFHQLVQRCQQAYMQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNL
KRSKQTKELWQRVSLEMTTFSP
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgttcgcagagtgggaggacggggagaggttttcatttgaagactctgat
cgctttgaggaagactctctttgttccttcatctctgaggcagagagcctttgccagaac
tggagaggatggaggaagcaatcggctggacccaattcccccactgtgaaaatgaaagat
gggctggtgatcccgttggtggaactctctgcaaaacaggttgcatttcacattccattt
gaggtggtggagaaagtttatcctccagtgcccgaacaactgcagcttcgaatcgccttc
tggagtttcccagaaaatgaggaggatatcaggttgtactcgtgcttggcgaatggcagt
gcagatgagttccagcgaggagagcaactcttccgggtgagggctgtcaaagaccctctc
cagataggtttccatctgagtgccactgtggtgcccccgcagatggtgccccccaagggc
gcgtacaacgtggcggtgatgtttgaccggtgccggatcacatcgtgcagctgcacctgc
ggcgccggggccaagtggtgcgctcacgtcgtggcgctctgcctcttccgcatccacaac
gcatctgcagtgtgcttacgagcacctgtttctgagtctttgtctcggctacaaagagat
cagttgcaaaaatttgctcagtacctaatcagtgaacttccacaacagattcttccaact
gctcagcgcttgctggatgagttgctatcttctcagtctactgccatcaacacagtatgt
ggagccccagatcccactgctggaccttctgcatcagatcaaagcacctggtacttagat
gaatctactctgagtgacaacataaagaaaactcttcataaattctgtggacccactccg
gttgtttttagtgatgtgaattcaatgtatctgtcttccactgagccaccagctgctgct
gagtgggcttgtctgctgcgtcccctgcgaggaagagaacctgaaggaatctggaacttg
ctttccattgtgcgggagatgtttaagagacgggatagcaatgcagctcctttgctggag
attctgactgaccagtgtctcaactatgagcagataactggctggtggtacagtgtgcga
acatccgcgtcacacagcagtgccagtgggcacacaggacgcagcaatggccagtcagaa
gtagctgctcatgcttgtgcaagcatgtgtgatgagatggtggttctttggaggctggct
gtccttgacccaactattagtccacagaggcgcagggatctttgctcacagctcagacag
tggcagctgaaagtcatagataatgttaagaggggtcagcacaagaaatcactggagaag
ctcttccaaggtttcaagccagctgtagaagcctgttacttcaactgggaggaagcttac
cccattcctgggattacatatagcagcactgacaagaagaactcattctgttgggtaaag
gccatccaacagaggagctgcaggttgcagtgtgcagaaagtgcctgtgaggctggtagg
acccacagccaggaggccgggggacagtgtgtgcagcctggggacaggctgcggccctct
ccccaggagccagcggttcgtcccaaagagctcaccggaaagcggaaagttgtctctgaa
acgccgcagagggttctgagacggctctcggcagaaggggataaagctgtctataagact
gcagtgagcaaagcaaagttgccggtgagcaaaggcttgaccagtaaacatagtgggaaa
cgccgtatgagcagtgaggacagctctctggagccagacttggcagagatgagcctggat
gacagcagcttggcactgggggcagaagccagcaacacctttagttttacagaaagtcca
ctgagcaggagctacagggatgcctttgaggaagatggtggagtgtacttctccgaggga
cctgagcccaccctcagaagcagttccatgtccaaaaaactatccaagggccctgtaggg
gagatgggtagtggtgatgatgacctgccttctgcagatgagaattctggtggtgtgagt
ctgaagccagaagaagtgggagagaatggtgcagcagggggaggggatgatggagaagag
gaagatgattaccaggtatactatctgaatccacaagaggtagccaaggaagatgatgac
aaagctgaagggggaattgaagaggagcaggatatatttgctggtataaagcctctggaa
caggagaaccggatggagatcctgtttgcctgtgcagaggcactgtatgcacatggatac
agtaatgaggcttgccgcttgactgtagagcttgccagggacctactggccaaccctcca
gatctcaaagtggagcagccaccaactaagggcaaaaagaacaaggtgtcaaccagcaaa
cagacatggatggcaaccaacaccttatctaaagctgctttcttgctgactgtcttgagt
gagcgactggagtaccacaacctggccttccgaataggaatgtttgctctggagctgcag
agaccgcccgcctctaccaaggctctggaggtgaagctggcttatcaggaatctgagatt
gcagccctcttgaagaagattcccttgggcaccaatgagatgaacactattcgaggaaga
gctgaagaactgcgagaaggaaccttgtgtgattaccgtcctgtcttgcctctgatgttg
gcaagctttatatttgatgtcctgtgcactccagtggtttctcctacaggctctagaccc
ccaagccgtaattggaataatgaaatgcctggagatgaagagcttggctttgaggcagct
gttgctgcccttggtatgaaaacaactgtcagtgaagcagaacatcctctgttgtgtgaa
ggcacacgaagggagaaaggagatctggcactagccttgatgattacttacaaggatgat
caatctaagctgaagaagattttagacaaactcctggacagagagagtcaaactcacaaa
ccgcagacgctgagttctttctactcatccagcaagcctacagttgccaatcaaaaatct
ccttccaaacatgctgcccagtctgctgcagctatccagcagcttccggggacttctgtc
actcagcaagctgctgtaagcactgcagtgcagagcagtcctgagaactttgtagaaaag
agtacacaggagagctctcagaggtccccctgtgagccagcttcagaggccactgttttg
aaacaagagggaaaggtccccagtcgtctggcccttggaaaccgaggtggatataatggg
agatgctggggttcacctgtcaggcagaagaagaaacacacaggcatggctagtattgac
agcagtgctcctgaaaccacctctgacagttctccaacgctcagtcggcgtcccctacgt
gggagctgggcaacaacatcctggggcagaggacaggacagtgacagcatcagcagttct
tcaagtgattctctgggatcttcctcttccagtggcagtaggagagcaagtgggggagcc
cgtgcaaagactgtggaagttggcaggtataaagggaggcggctggagagccatgctcct
catgtcccaaaccagccctcagaggcagctgctcacttctactttgaattggccaagaca
gtccttatcaaagcaggtggaaacagcagtacctctatcttcacccacccttcctccagt
ggtgggcaccagggaccacaccgcaaccttcacctctgcgcctttgagatcgggctgtat
gcactagggctgcacaactttgtgtctcccaactggctctctcgaacttactcctcccat
gtctcttggatcacagggcaggccatggaaattggtagcgcagccttgaacatcttggtg
gagtgttgggatggacatctaactcccccagaagtggcatcactggcagacagagcttca
cgggccagagactccaacatggtgcgggcagctgctgaactggcactcagctgcctgcct
catgcccatgccctgaacccaaacgagatccagagggctctggtgcagtgcaaggaacag
gacaatctgatgctggaaaaggcctgcatggcagtagaagaggcagctaaaggaggtggt
gtgtacccagaagtcctctttgaagtagctcatcagtggtactggctttatgagcagact
gttggtgggaccccagcccagagagaaggagccactggctgcagtgccagtggtgcacgg
gctgcatctgaagcagcgcgtggcttggcagacagccgggtgacctcagagccgaccacg
gtgacggtggcagctgcagtaactgcagcagcaactgtcatgccagtgatctctgtgggg
tcaaccatgtaccagcagcatacggtggcagggccagcaatggcacatacacacacgcag
ggtctccacccttacaccacccttcagactcacatcccctgtaacccccagtatattgga
cacactatccagcacatgccacgcccagctgtcttcccggtccctggctcggcatacccg
cagggtgtccatccagcattcataggggcacagtacccttactcagtaacagcaccgtcc
ctggcagctacagcagtgtccttccctggcgtgcccgtcccctccgtgacgcagattgcc
gtgcatccctatcacagtgagacgggactgtcgctgtcttccaatgtagcgctaggcagt
gtccatgcaggatcaacgttcccagcgattcagggtgcttccttgacaactctgtcctca
cagcccaactcccttgttacggggggttttcctgccgaggatgagcagcacagtcagcct
gtgagcccccagggtctgcactacctccattctgcataccgagttgggatgctggctctg
gagatgcttggccgaagagctcacaacgaccatcccaacaacttctcccgcagcccgccc
tacactgaggatgtaaaatggctccttgggttagctgcaaagttaggtgtaaactatgtg
catcagttttgtgttggtgctgccaagggggtgttgagcccttttgtgctccaggagatc
ataatggaagctctacagaggctcaaccctgcccatgtgcacaaccacctgcgcactcca
gccttccaccagctggtgcagaggtgccagcaggcctatatgcagtacatccatcatcgg
ctgatccatctcactccagctgactacgatgactttgtgaatgccatccgcagcgccaga
agcgccttctgcctgactcccatgggcatgatgcagtttaatgatattctccagaaccta
aagcgcagcaagcagacaaaggagctgtggcaaagggtctctctggaaatgaccaccttc
tcaccatga
DBGET
integrated database retrieval system
