Lonchura striata (white-rumped munia): 110480713
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Entry
110480713 CDS
T05897
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
lsr
Lonchura striata (white-rumped munia)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
110480713
NCBI-ProteinID:
XP_021404531
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Position
1:complement(94800125..94810009)
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AA seq
739 aa
AA seq
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MVMLLFPVQLLTVAVTVYLELVRSAQGGAYYGIKQLPPQVPQYQPLGQQVPHMPLGKEGI
PMQHLGKEMPHMPYGKEYPHLPQYRMEVPQMPMLSKDMAPKKEKEIPMRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGIGKPGLPGMPGKPGIMGPPGPRGEMGPKG
EIGPMGIPGPQGPPGPHGLPGIGKAGAPGLQGQPGPKGEPGMKGPPGIPGIPGPKGEKGV
GIPGLPGLKGPPGLPGPPGPVGLPGVGKPGMVGFPGPQGPLGKPGPPGELGLQGPPGAPG
IQGPPGSPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGERGVG
GLPGPLGPKGEKGHAGPPGMGGPPGEPGQPGLPGIMGPPGAAGFPGPKGEGGAVGPPGPV
GPKGEPGMQGFPGKPGFPGEVGGPGLRGLPGPTGPKGEAGQKGLPGLPGVPGLVGPKGEP
GLPGAQGLQGPSGIPGIAGPSGPIGSPGLPGAKGEPGMPGPPGFPGVGKPGAAGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGPPVIIPPTPPAVGQYLPEVGPGIEGLKSPYGYKGKK
GKAGGIVYEMPAFTAELLTPFPRVGVPVKFDKLLYNGRQNYNPQTGIFTCEIPGVYYFAY
HVHCKGTNVWVALYKNNEPLMYTYDEYKKGFLDQASGSAVVQLMHGDKVYVQMPSEQAAG
LYAGQYVHSSFSGYLLYPM
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgctactcttccctgtgcagctgctcacagtggctgtaactgtttacctagag
ctggtgaggtctgctcaaggtggagcctactatgggatcaagcagctgccacctcaggtg
ccccagtatcaacccctcggacaacaagtacctcacatgccactgggcaaagaaggcatc
ccgatgcagcacctgggcaaggagatgccccacatgccctatgggaaggagtacccccat
ctcccccagtacaggatggaggtcccgcagatgcccatgctcagcaaggatatggctccc
aagaaagagaaagaaattcccatgcgcagtctgaggggtgaacaaggccccccaggtgag
cctggaccaagagggccaccagggccaccaggattaccaggtcatggtgtgccaggagcc
aaaggaaaaccaggcccacaaggatacccaggaattgggaagccgggtttgccagggatg
ccaggaaaaccggggatcatggggcccccagggccaagaggggagatggggccgaagggg
gagattgggcccatggggatacccggaccacagggaccaccagggcctcatgggcttcct
ggcataggaaaggcgggtgctccggggctgcaggggcaaccagggccaaagggtgagcct
gggatgaaggggccaccgggaatccctgggatcccagggccaaaaggggagaagggggtt
gggatcccaggtttgccaggtctgaagggtccacctgggctgcctggtccccctggcccc
gtggggctgccgggggttggcaaacccggcatggttggcttccctggcccacagggaccg
ctgggaaaacccggacccccaggagagttagggctgcaggggcctccaggggcccccggg
atccaaggccctcccggctcgcctggcattggcaaaccaggccaggacggcatacccggc
cagcccggcttcccaggtggcaaaggggaacagggattgccgggcctgccggggcccccc
ggcctccccggagttgggaagccgggcttccccgggcccaaaggggagcgaggtgtgggc
ggtctgcccgggcccctggggccgaagggggagaaggggcacgcggggccacctggcatg
ggagggccaccaggggagcccggccagccaggcctgccgggcatcatgggccccccgggg
gccgccggtttcccaggacctaaaggggaggggggtgccgtagggccaccaggaccagtc
ggccccaagggggaacccggcatgcagggttttccaggaaagccaggctttcctggggaa
gtgggtggccctgggctgcgggggctgccgggccccacaggacccaagggggaggccgga
cagaaaggcttgccggggctgccgggtgtcccgggacttgtgggaccgaagggtgagccc
gggctccccggtgcccaggggcttcagggcccctcgggcatcccgggcattgcgggacca
agcggtcccatcggctcccctgggctgccaggggcgaagggcgagccaggcatgcccggc
ccccccggcttcccgggggtaggcaaacctggtgccgcggggctgcagggacccccggga
aagcctggggcgctcggtcctcccggccagccagggctccaggggccaccgggcccgccc
gggcccccaggtcccccggtcatcatcccgcccactccaccagccgtgggacagtacttg
cctgaggtggggccagggatagaaggcttgaagtccccctacggctacaagggcaagaaa
ggcaaggctggcggcattgtctacgagatgcccgcgttcacggcagagctcctcactccc
ttcccccgcgtcggggtgcccgtcaagttcgacaagctcctgtacaacggccggcagaac
tacaaccctcagactggcatcttcacctgcgagatccccggcgtctactacttcgcctac
catgtccactgtaaaggcaccaacgtgtgggtggcgctgtacaagaacaacgagccgctc
atgtacacctacgacgagtacaagaagggcttcctggaccaggcttcgggcagtgccgtg
gtgcagctgatgcacggagacaaggtttacgttcagatgccatccgagcaagcggcagga
ctctatgctgggcagtacgttcattcgtctttttcagggtatttattgtatcccatgtaa
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