KEGG   Lonchura striata (white-rumped munia): 110480713
Entry
110480713         CDS       T05897                                 
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
  KO
K23455  collagen type VIII alpha
Organism
lsr  Lonchura striata (white-rumped munia)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 110480713
NCBI-ProteinID: XP_021404531
LinkDB
Position
1:complement(94800125..94810009)
AA seq 739 aa
MVMLLFPVQLLTVAVTVYLELVRSAQGGAYYGIKQLPPQVPQYQPLGQQVPHMPLGKEGI
PMQHLGKEMPHMPYGKEYPHLPQYRMEVPQMPMLSKDMAPKKEKEIPMRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGIGKPGLPGMPGKPGIMGPPGPRGEMGPKG
EIGPMGIPGPQGPPGPHGLPGIGKAGAPGLQGQPGPKGEPGMKGPPGIPGIPGPKGEKGV
GIPGLPGLKGPPGLPGPPGPVGLPGVGKPGMVGFPGPQGPLGKPGPPGELGLQGPPGAPG
IQGPPGSPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGERGVG
GLPGPLGPKGEKGHAGPPGMGGPPGEPGQPGLPGIMGPPGAAGFPGPKGEGGAVGPPGPV
GPKGEPGMQGFPGKPGFPGEVGGPGLRGLPGPTGPKGEAGQKGLPGLPGVPGLVGPKGEP
GLPGAQGLQGPSGIPGIAGPSGPIGSPGLPGAKGEPGMPGPPGFPGVGKPGAAGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGPPVIIPPTPPAVGQYLPEVGPGIEGLKSPYGYKGKK
GKAGGIVYEMPAFTAELLTPFPRVGVPVKFDKLLYNGRQNYNPQTGIFTCEIPGVYYFAY
HVHCKGTNVWVALYKNNEPLMYTYDEYKKGFLDQASGSAVVQLMHGDKVYVQMPSEQAAG
LYAGQYVHSSFSGYLLYPM
NT seq 2220 nt   +upstreamnt  +downstreamnt
atggtcatgctactcttccctgtgcagctgctcacagtggctgtaactgtttacctagag
ctggtgaggtctgctcaaggtggagcctactatgggatcaagcagctgccacctcaggtg
ccccagtatcaacccctcggacaacaagtacctcacatgccactgggcaaagaaggcatc
ccgatgcagcacctgggcaaggagatgccccacatgccctatgggaaggagtacccccat
ctcccccagtacaggatggaggtcccgcagatgcccatgctcagcaaggatatggctccc
aagaaagagaaagaaattcccatgcgcagtctgaggggtgaacaaggccccccaggtgag
cctggaccaagagggccaccagggccaccaggattaccaggtcatggtgtgccaggagcc
aaaggaaaaccaggcccacaaggatacccaggaattgggaagccgggtttgccagggatg
ccaggaaaaccggggatcatggggcccccagggccaagaggggagatggggccgaagggg
gagattgggcccatggggatacccggaccacagggaccaccagggcctcatgggcttcct
ggcataggaaaggcgggtgctccggggctgcaggggcaaccagggccaaagggtgagcct
gggatgaaggggccaccgggaatccctgggatcccagggccaaaaggggagaagggggtt
gggatcccaggtttgccaggtctgaagggtccacctgggctgcctggtccccctggcccc
gtggggctgccgggggttggcaaacccggcatggttggcttccctggcccacagggaccg
ctgggaaaacccggacccccaggagagttagggctgcaggggcctccaggggcccccggg
atccaaggccctcccggctcgcctggcattggcaaaccaggccaggacggcatacccggc
cagcccggcttcccaggtggcaaaggggaacagggattgccgggcctgccggggcccccc
ggcctccccggagttgggaagccgggcttccccgggcccaaaggggagcgaggtgtgggc
ggtctgcccgggcccctggggccgaagggggagaaggggcacgcggggccacctggcatg
ggagggccaccaggggagcccggccagccaggcctgccgggcatcatgggccccccgggg
gccgccggtttcccaggacctaaaggggaggggggtgccgtagggccaccaggaccagtc
ggccccaagggggaacccggcatgcagggttttccaggaaagccaggctttcctggggaa
gtgggtggccctgggctgcgggggctgccgggccccacaggacccaagggggaggccgga
cagaaaggcttgccggggctgccgggtgtcccgggacttgtgggaccgaagggtgagccc
gggctccccggtgcccaggggcttcagggcccctcgggcatcccgggcattgcgggacca
agcggtcccatcggctcccctgggctgccaggggcgaagggcgagccaggcatgcccggc
ccccccggcttcccgggggtaggcaaacctggtgccgcggggctgcagggacccccggga
aagcctggggcgctcggtcctcccggccagccagggctccaggggccaccgggcccgccc
gggcccccaggtcccccggtcatcatcccgcccactccaccagccgtgggacagtacttg
cctgaggtggggccagggatagaaggcttgaagtccccctacggctacaagggcaagaaa
ggcaaggctggcggcattgtctacgagatgcccgcgttcacggcagagctcctcactccc
ttcccccgcgtcggggtgcccgtcaagttcgacaagctcctgtacaacggccggcagaac
tacaaccctcagactggcatcttcacctgcgagatccccggcgtctactacttcgcctac
catgtccactgtaaaggcaccaacgtgtgggtggcgctgtacaagaacaacgagccgctc
atgtacacctacgacgagtacaagaagggcttcctggaccaggcttcgggcagtgccgtg
gtgcagctgatgcacggagacaaggtttacgttcagatgccatccgagcaagcggcagga
ctctatgctgggcagtacgttcattcgtctttttcagggtatttattgtatcccatgtaa

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