Lonchura striata (white-rumped munia): 110480738
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Entry
110480738 CDS
T05897
Symbol
WDR3
Name
(RefSeq) WD repeat-containing protein 3 isoform X1
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110480738 (WDR3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsr03009
]
110480738 (WDR3)
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
110480738 (WDR3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Utp12
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_EIPR1
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_HPS5
WDR54
Beta-prop_Vps41
Beta-prop_SPT8
WD40_like
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
110480738
NCBI-ProteinID:
XP_021404577
UniProt:
A0A218VCT1
LinkDB
All DBs
Position
1:complement(89460021..89478525)
Genome browser
AA seq
939 aa
AA seq
DB search
MGLTRQYLRYEPAALFGLVASARAGVAFVALRGERGRYAAVPACEHVFVWDTRKGEKVLI
LKGLKQQVSCLCPSPDGLHLAVGYEDGAIRVFNLLSGESTITFNGHRAAVTALQYDHLGG
RLVSGSKDTEVIVWDVINESGLYRLRGHKDVITQVVFLKEKNLLITCAKDTLVKWWDLDT
QHCFKTLVGHRAEVWGMALLSKEKRLITGSADSELRVWDLTYIQEVKDHDEPEFKKSKGS
SLPGAEENNEEDETLEMDEHPEERIVKCSKVGSIMREGRDRVVTLGTDRMGKFLACHGTD
TVLEVFSVLSEEEIQKKLEKKLKKARKKAKQNSEEEPERSVKLSLQEEIQRVTNVKASSK
IKSFDLILSPKGELKMVLLLQNNIIELYNLDLSAQVTQAVRVSRITIGGHRSDVRTLAFS
SDNIAILSAAAESVKIWNRSTLQCIRTMECEYALCSLFVPGDRQVIIGTKTGKLQLYDLA
SGSLIETLDAHDGAVWSIALSPDQHGFVTGGADKCVKFWEFELVKDESSVQKRLSMKHVR
VLQLDEDVLCVRYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCMDICYDGT
LIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVPKSHLFFTAGKDSKIKQWDADK
FEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWERTREPLILEEEREMQREAEYE
ESVAKEEQPVVAGERQGETGLAGKKTIETIKAAERIMEAIELYREETAKLKEHNAICKAA
GKEVPFPVNPILRAYGNITPSAYVLEVFKKVKSSELEESLLVLPFSYVPDLLRLFNEYIQ
QGSDVELLCRALLFLLKIHFGQITGNQMLVTVIENLKKTTISRVSEARDVLGFNMAGLQF
LKREIEAKEEVTFFADATERFEEKKRKRKKKEKMVLTVL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgacgcggcagtacctgcgctacgagcccgccgcgctcttcgggctggtggcc
agcgccagggccggcgtggccttcgtggcgctgcgcggcgagcggggccgctacgcggcc
gtgccggcttgcgagcacgtgttcgtgtgggacacaaggaaaggagagaaggttcttatc
cttaagggtctcaagcagcaagtcagttgcctctgcccctctccagatgggttgcacctg
gctgttgggtatgaagatggagcaatccgtgtcttcaacctcctaagtggagaatcaact
atcactttcaatgggcacagggctgcagtgacagccctgcagtacgaccacctgggtggc
aggctggtgtctggctcgaaggatacagaagtcattgtgtgggatgtcatcaatgagagt
ggcctgtaccggctgaggggacacaaggatgtcatcactcaagttgttttcttgaaggag
aaaaacttgttgatcacttgtgccaaggacacactagtgaaatggtgggacctggacacc
cagcactgcttcaaaactctggttggacaccgagctgaggtctgggggatggctttgctg
tccaaagagaagcgtctgatcactgggagcgctgacagtgagctgagggtgtgggatctc
acgtacatccaggaggtaaaagatcacgatgaaccagaattcaagaaaagcaaagggtct
tctttacctggagcagaagaaaacaatgaagaagatgagaccttagagatggatgagcat
cctgaggagcgcattgttaagtgcagcaaagttggatccatcatgcgggaagggagagac
cgagtggtgactcttggcacagaccggatgggcaagtttttggcctgccacggaacagac
actgttctggaagtgttctctgtcctttctgaagaggaaatccaaaagaaattggaaaag
aaattgaagaaagcaaggaaaaaagccaaacagaactctgaagaggagcctgaaaggagt
gtgaagctgagcctgcaggaagagattcagcgggtcactaatgtcaaagcttcttctaaa
atcaagtcatttgacttgattctctctccaaaaggagagctgaagatggtactgctgctc
cagaacaatatcattgaattgtacaacctggacctgtcagcacaagtgacccaggctgtc
cgtgtgtccaggataaccattggaggccaccgcagtgatgtcaggacattggcttttagc
tctgacaacattgccatcctctcagcagctgcagagtctgtgaagatttggaacaggtca
accttgcagtgcatccggaccatggagtgcgagtacgcgctctgctcgctctttgtgccc
ggagatcggcaggtcatcattgggaccaagacagggaagttgcagctgtatgacctggct
tctggcagtctgatagagacacttgatgctcatgacggggcagtgtggtctattgctctt
tcaccagaccagcatggctttgtgacaggaggtgctgataaatgtgtcaagttctgggag
tttgagcttgtgaaggatgagagcagtgttcagaaaaggctttccatgaagcatgtgcgc
gttttacagctggatgaagacgtgctctgtgtgcggtacagccccaaccagaagctgctg
gctgtctctttactggattgcactgtgaaggttttctacgttgacacactcaagtttttc
ctttctctctatggacacaagctgccagtgctgtgtatggacatctgctatgatggaact
ctaattgcaactggctctgctgacaggaatgtgaagatttggggcttggattttggtgac
tgtcaccgttctctctttgcccatgatgacagtgtgatgtatctgcagtttgtgcccaaa
tcccatctcttcttcacggctgggaaggacagcaagattaagcagtgggatgcagataaa
tttgaacatatccagacactggaggggcatcaccaggaggtttggtgtttggctctcagt
cccaatggagactatgtggtgtcagcatcccatgacaagtctctgcgcctctgggaaagg
acaagggagccactgattctggaggaggagagggagatgcaacgagaagctgaatatgaa
gagagtgtggcaaaggaagaacagcctgtggtggctggagagaggcaaggagagacaggg
ctggcaggaaagaagaccattgaaaccatcaaagcggctgagaggatcatggaagctatt
gagctgtacagagaagagactgcaaaactaaaggaacacaatgccatatgcaaagctgca
ggaaaagaggttcccttccctgtcaatcccattctccgtgcctatggaaatattacacct
tctgcctatgtgctggaagttttcaagaaggtcaagtcaagtgagctggaagagtctctc
ctggtgctgcctttctcctacgtccctgacctgctcagacttttcaatgaatatattcag
cagggctcagacgttgagcttctgtgccgagctctcctcttcctgctcaagatacatttt
gggcagatcacaggcaaccagatgctggtgacagtgatagaaaatctgaagaaaactacc
atctccagagtcagcgaggcccgggatgtgctgggattcaacatggcaggactccagttc
ctgaagagggagattgaggccaaggaggaggtgacattttttgctgatgctactgaacgc
tttgaggagaagaagagaaaaaggaagaagaaagaaaagatggttcttacagtgctctag
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