Lonchura striata (white-rumped munia): 110480747
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Entry
110480747 CDS
T05897
Symbol
CHD1L
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110480747 (CHD1L)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110480747 (CHD1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
110480747
NCBI-ProteinID:
XP_021404645
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Position
1:complement(90977881..91001024)
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AA seq
888 aa
AA seq
DB search
MSRFSRALRRAGGARAGAAGVQEADVQRWGLTGIKLRPYQLEGVNWLVQCYEVQHGCILG
DEMGLGKTCQTISLLLYLTKKLSNKERFLILCPLSVLSNWKEELERFAPGLSFISYVGSK
EERPKLQENLKGDSHFPTLLTTYEICLKDAAFLKSFNWAALVVDEAHRLKNQNSLLYKTL
SEFSIGFSLLLTGTPIQNSLQELYSLLSLIEPDIFPQEQVKEFVEYYQGIEKESEPAKEL
HSLLQPFLLRRVKSEVAAELPKKVEVVLYHGMSALQKKYYKAILTKDLDAFENETGRKVT
LQNVLIQLRKCVAHPYLFNGVEPEPFEIGDHIVEASGKMHLLDKLLSFLYAGGHRVLLFS
QMTQLLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNFGQQPIFIFLLSTRAGGVGMNL
TAADTVIFTDSDFNPQNDLQAIARAHRIGQHKPVKIIRLIGRDTVEEIIYRRAASKLRLT
NAIVEGGQFALGAPKPQGSAELQLSEILKFGLDKLLSSEGSTVQDVELENILGETKGGQW
IMETVLPQKEENEEEDTENHMYVYEGKDYSKEPSREDKKAFDQLLDLQKAFIEETSKEGR
ALRNKANALLTGLWEQSGRRKHLLSEEELEARRKKRQEAAAKRARLMEEKKAAKAEAEHK
KKMAWWEANHYISTCLPSEESGSEEEFEEDELGWNVNLDYKDGGQNYIKYVMGDVTHPQA
EEEDAIIVHCLDDSGRWGRGGLFTALEARSDQPRQIYEMAGKMKDLELGGTLLFPIDDKK
SRKKGQDLLALIVAQHRDRSNNLSGIKLSALEKGLKKIYLVAKKRNATVHLPRIGYATKG
FNWYGTERLIQKHLAARGVPTLIYYFSRNKGSSSASQPYASSTAVSKP
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcttctcccgggcgctccgccgcgccggcggcgcccgggccggggctgcgggc
gtgcaggaggcggacgtgcagcggtgggggctgacaggcattaaacttcgtccctatcaa
ttagaaggtgtaaactggctggtgcaatgctatgaagtccagcatggctgtatcctgggt
gatgagatgggccttgggaagacttgtcagaccatttctctacttctttatttgacaaaa
aagttatcaaacaaagagagatttctgatactttgtcctctgtcagttctgagcaactgg
aaggaagagctggagaggtttgctcctggtctttctttcatatcctatgtaggcagcaag
gaagagcgacccaaactgcaagagaatctgaaaggggactctcacttccctacacttctg
acaacatacgagatttgcctgaaagatgcagcatttctaaagtcctttaactgggctgcc
ttggttgtagatgaagctcacagactgaaaaatcaaaattctctgctttacaagacactt
tctgagttctcaataggcttcagcctgctactcacaggcactccaatccagaacagcctg
caggaactgtactccttactcagccttattgaacctgacatctttcctcaggaacaagtg
aaagagtttgttgagtattaccaaggtattgaaaaggagagtgagccagccaaagaattg
cacagtcttctgcagccatttctgcttcggagagtcaaatctgaggtggctgcagagctg
ccaaagaaggtggaagtggttctgtaccatggaatgtcagctctgcagaagaagtattac
aaggctattttgacaaaagatctagatgcatttgaaaatgaaactggaaggaaggttaca
ctccagaatgtcttaattcagcttcggaagtgtgttgcccacccatacctcttcaatggt
gttgagccagaaccctttgagattggagaccatattgttgaagctagtgggaagatgcat
ttgttggataaactcctttcattcttgtatgctggtggccaccgcgtgttgctcttttct
cagatgactcaactgcttgatatcctacaggactacatggactatagaggctacagctac
gagcggctggatggctctgttaggggtgaggagagacaccttgccatcaagaactttggt
caacagcccatctttatcttcctgttgagcaccagagcaggtggagttggcatgaatctg
acagcagcagatacagttatttttactgatagtgattttaacccacaaaatgacttgcaa
gcaatagcaagagctcaccggattgggcagcacaagcctgtaaaaattatccgtttgatt
gggcgagatacagttgaagaaataatctaccgaagagctgcctccaagctccggctgacc
aatgccattgttgaaggggggcagtttgctctgggagcacccaagcctcagggatcagca
gagttacagctgagtgaaatcttgaaatttggcctggataaattgctctcctctgaggga
agtactgtacaggatgtggagctggaaaacatccttggagagaccaaaggagggcagtgg
ataatggagactgtgctgccacaaaaggaagagaatgaagaggaggatacagagaatcac
atgtacgtgtatgaaggcaaagattattcaaaagaacccagcagagaagacaaaaaagca
tttgatcagcttttggaccttcagaaggcatttattgaagagaccagtaaggaagggaga
gctctccggaacaaagcaaacgcccttctcacaggcctttgggaacagtcaggcaggagg
aagcatttgctgagtgaagaggagctagaggctcggaggaagaaacgccaagaagcagca
gcaaagagagcaaggctcatggaggaaaagaaggcagcaaaagcagaggcagaacacaag
aaaaagatggcctggtgggaggccaatcattacatatctacctgccttccttcagaggaa
agtggctccgaggaagagtttgaggaggatgagttggggtggaatgtgaatttagattac
aaagatggaggccagaactatattaaatacgtcatgggagatgtaacccacccccaagca
gaagaggaagatgccatcattgtccattgcctagatgactctggccgctggggaaggggt
ggtttattcactgctctggaggctcgttctgatcagccaaggcaaatatatgagatggca
ggaaagatgaaagatctggagttaggaggaaccctgttattccctattgatgataaaaaa
tccaggaaaaaaggacaagatttgctggccttgattgtagctcagcaccgggatcggtcc
aacaacttgtctggcattaaactgtcagctttggaaaagggcctgaagaagatttattta
gtagccaagaaaaggaatgcaacagtgcatcttccacggattgggtatgcaacaaaaggc
ttcaactggtacggcaccgagcggctcatccaaaagcacctggcagctcggggtgtgccc
actcttatatactacttctctaggaataaaggttcttcctctgcttcacagccatatgca
tcttcaacagcagtctcaaagccatga
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