Lonchura striata (white-rumped munia): 110480780
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Entry
110480780 CDS
T05897
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04510
Focal adhesion
lsr04520
Adherens junction
lsr04810
Regulation of actin cytoskeleton
lsr04820
Cytoskeleton in muscle cells
lsr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110480780 (VCL)
04520 Adherens junction
110480780 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110480780 (VCL)
04810 Regulation of actin cytoskeleton
110480780 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110480780 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsr04812
]
110480780 (VCL)
04147 Exosome [BR:
lsr04147
]
110480780 (VCL)
Cytoskeleton proteins [BR:
lsr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110480780 (VCL)
Exosome [BR:
lsr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110480780 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
DASH_Spc34
Motif
Other DBs
NCBI-GeneID:
110480780
NCBI-ProteinID:
XP_021404717
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All DBs
Position
6:complement(14793813..14850950)
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AA seq
1067 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAI
RQILDEAGKAGELCAGKERREILGTCRTLGQMTDQLADLRARGQGATPMAMQKAQQVSQG
LDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMAEARKVA
ELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNR
AVANTRPVKAAVHLEGKIEQAQRWIDNPTVADRGVGQAAIRGLVAEGRRLANVMMGPYRQ
DLLAKCDRVEQLSGQLAELAARGEGESPQARAIAAQLQDSLKDLKARMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAARLGATAEKAAAVGTANKTTVE
GIQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYKILGAVAKVREAFQPQE
PDFPPPPPDLEHLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMM
MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASD
EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccacacgcgcaccatcgagagcatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacggaaaggccatcccggacctc
accgcccccgtgtcggccgtgcaggccgctgtcagcaacctggtgcgggttggaaaagag
actgtgcagacaacagaagaccagatcttgaaaagggatatgccaccagcgtttatcaag
gtggagaatgcctgcaccaaacttgtgcgagcggcccagatgctgcaagcagatccttat
tcagtaccagctcgtgactatctcattgacggatcaagaggaatcctttctggaacatca
gacttgctcctgacatttgatgaagcagaggtccgtaaaatcatccgtgtctgcaaagga
atattggaatacttgactgtggccgaagtggtagagacaatggaggatctggtgacttac
acgaagaatttagggccaggaatgacaaagatggccaaaatgattgatgagagacaacaa
gaattaactcaccaggaacatagggttatgctggtaaactccatgaatacagtgaaggag
ctattgccagtacttatttcagctatgaagatttttgtaaccacaaaaaattctaaaagc
cagggaatagaagaggccttgaaaaaccgcaatttcacagtagagaaaatgagtgctgag
ataaatgaaataattcgtgtattgcaactcacttcttgggatgaagatgcctgggcgagc
aagaaggacactgaagccatgaagagagctttagccttaatagattctaagatgaatcag
gcaaaaggttggctgagagatccaaatgcacccccaggggatgctggtgagcaggccata
aggcagatcctggatgaagctggcaaagcaggagagctgtgtgcaggcaaggagcgcaga
gagatcctgggcacctgcagaaccctggggcaaatgacagatcagctggctgacctccgg
gctagaggacagggtgctacacccatggctatgcagaaagcccagcaggtgtcccagggt
ctggacttgctcactgccaaagtggagaatgcagcccgcaagctggaggccatgaccaac
tctaagcaggcaattgctaagaagattgatgctgctcagaattggcttgcagatcctaat
gggggcagtgaaggagaggagcatattaggggaattatggctgaagcaaggaaagttgca
gaactctgtgaggagcctaaagaaagagatgatatccttcgttccttgggggaaatatct
gctctgacagctaagctgtcagatctgcggcgacatgggaaaggtgactctcctgaggcc
cgtgctttggctaagcaaatagctacatcacttcagaatttacagtccaaaacaaacagg
gctgtagcaaatacgaggcctgttaaagcagctgtccatttggagggcaagattgaacaa
gctcagaggtggatagacaatcctacagttgctgatcggggagtaggccaggccgccatc
cgcgggctggttgccgaaggccggcgcttggccaacgtcatgatgggcccgtaccggcag
gacctgctggccaagtgtgaccgcgtggagcagctctcgggccagctggctgagctggct
gcgcgaggcgagggcgagtccccccaggccagggccattgctgctcagctccaggactcg
ctgaaggatcttaaagcacgaatgcaagaagccatgacccaggaagtttctgatgttttt
agtgacaccacaactcctattaaattgttagcagtagcagccactgctccctcagatgct
cccaacagagatgaggtgtttgatgaaagagcagcaaactttgaaaaccatgctgctaga
ctgggagctacagcagaaaaagcagctgcagttggaactgccaataaaactactgtggag
ggcattcaggcaacagtgaaatcagcaagggaactcaccccacaggtagtatcagcagct
cgtatcctcttgagaaatcctggaaatcaagctgcttatgaacattttgagaccatgaaa
aaccaatggattgataatgtagaaaaaatgacagggttggtggatgaagccattgatact
aaatctctgttggatgcatcagaagaggccattaagaaggacctggataaatgtaaagtt
gcaatggccaacatgcaacctcagatgctggtagctggtgccaccagcattgccagacga
gcaaaccgcatcctgctggtggctaaacgggaggtggaaaattctgaagaccctaaattt
cgggaggctgttaaagcagcctctgatgagctgagcaaaactatatcacctatggtaatg
gatgctaaagctgtggcaggcaacatttctgatcctggtttgcagaagagtttcttggat
tctggatacaaaattctgggagctgtggccaaagtcagagaagccttccagcctcaggaa
ccagattttcctcctcctcctcctgaccttgagcaccttcatctgactgatgagctcgct
cctccaaaaccacccctgccagagggggaggttcccccgcctaggccaccaccacctgaa
gaaaaggatgaagaattcccagagcaaaaggcaggagaagcaatcaatcagcccatgatg
atggctgctagacagttgcatgatgaagctcggaaatggtctagcaagggcaacgacatc
atcgcggcggcgaagcgcatggcgctgctcatggccgagatgtcgcgcctggtccgaggc
ggcagcggcaacaagcgcgcgctcatccagtgcgccaaggacatcgccaaggcgtccgac
gaggtcacccggctcgccaaggaggtggcaaagcagtgcacggacaagcgcatcagaaca
aacctgctgcaggtctgtgagcgaatcccaaccatcagtacacagctgaaaattctctcc
actgtcaaagctactatgctgggcagaactaatatcagtgatgaagagtcagaacaggca
actgagatgttggttcataatgcccagaatctcatgcagtctgtgaaggaaactgtgaga
gaagctgaagcagcatccattaagataagaacagatgctggattcactcttcgctgggtc
agaaagaccccgtggtatcagtaa
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