Lonchura striata (white-rumped munia): 110480782
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Entry
110480782 CDS
T05897
Symbol
FBXO40
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110480782 (FBXO40)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110480782 (FBXO40)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
110480782
NCBI-ProteinID:
XP_021404698
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Position
1:complement(88527602..88540454)
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AA seq
700 aa
AA seq
DB search
MIKHRAQKAPPGQHRHCERCFSRHCRAPIEISVSCMVISCHLHCGATFHMCKEEEHKLLC
PLEQVSCLNSAYGCPFSMARFKLGKHLQVCPASVVCCSMEWNRWPNVDSDTTLHKNIMKE
TLNEECLDTALALRDQKILFRALKIAELFPEWRKKDELEELMDQAMGGEAGAEGGAACGS
QEGNDQSELSQREREDLAKDKEGMDLGSYKTWENIFSKELLACQVTGSAASTGQKTEEAS
KKTASASRAASSTDKAKEGPDGAEEGKGQKSEQVTPSRELNGLAPWQEGVLERLKKEVGV
ADYNMYLVHHGGMLIRFGQMAACTPREKDFVYGNLEAQEVKTVYTFKVPVSYCGKRARLG
DALGHKMPTSDKSVDTSELGISIEELPKTNIVEATLLCALEKELKGHEISEARGIDGLFV
DFATQTYSFPLEPFSSSAVLADILDENSPPELHMELYTECVTRRHNKSSSAFTFTCSHFF
RRDEFPFHFKNVHADIQSCLDGWFQHRCPLAYLGCPFVQNHFRPEGLKAKVIYSKPLKTF
AIKPEVDTLLAEPGKCNSIVDSRGRNKDLLSSLPVEVLKYIAGFLDSFSLSQLSQVSVLM
RDICATLLQERGMVLLVWEKKRYSHGGTSWRARKKIWQFSSLFSRVHNWQRSDVPSMSEH
LRNCPFYQAEHRTDPVLLTGMSESREQTRKTLVSTFRHRV
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcaccgggcccagaaagctccccctgggcaacacaggcactgtgagcgatgt
ttcagccggcactgccgcgcacccattgagatctccgtgtcctgcatggtgatcagctgc
cacctccactgcggggccaccttccacatgtgcaaggaggaggagcacaaattgctctgc
cccttggagcaggtgtcctgcctcaactcagcctatggctgccctttctccatggcccgc
tttaagctggggaagcacctccaggtctgcccagcaagtgttgtctgctgctccatggag
tggaaccgctggccaaacgtggattcagacacaacgctgcacaagaatattatgaaagag
accttgaatgaagaatgtctggacacagctttggcactcagagaccagaagatacttttc
agggctttgaaaatagctgaattatttccagagtggaggaaaaaggatgaactggaagaa
ctaatggatcaagccatgggtggggaagcaggtgctgagggaggagctgcctgtggttcc
caagagggcaatgaccagtctgagctcagccaacgtgagcgggaagatttagcaaaggac
aaagagggaatggatctggggagttacaagacatgggagaacattttcagcaaagagctt
ctggcttgccaggtaacaggctcagcagccagcacaggacaaaagacagaggaggcttcc
aagaaaacagcatcagcctctcgtgctgccagctccacagacaaggcaaaggaaggacct
gatggtgcagaagagggaaagggccaaaagtctgaacaagtaacaccgagtagagaactg
aatggactggctccctggcaagaaggagtcctggagaggctgaagaaggaagtcggtgta
gcggattacaacatgtatctggtacatcacgggggaatgctcatccgttttggccagatg
gctgcgtgcactcccagagaaaaggactttgtctatgggaacttggaagcccaggaggtg
aagactgtctacaccttcaaagtgccagttagttactgtggcaaaagagcacgactagga
gatgcactgggccacaagatgccaacttcagacaagtcagtggatacctcagaactggga
ataagcatagaagaactacctaagacaaatatagttgaagccacgctactgtgtgctctg
gaaaaagagctgaaaggtcatgagatctctgaagcaagaggtatcgacggactctttgtg
gattttgcaacacagacatacagctttcctttggagcctttctcctccagcgcagttcta
gcagatattctggatgaaaacagcccaccagaactgcacatggagctctacactgaatgt
gtaaccagaagacacaacaaaagcagttcagctttcacgttcacttgcagtcatttcttt
aggagggatgagttcccattccacttcaagaatgtgcatgctgatatccagtcatgcctg
gatggatggttccagcatcgctgcccactggcctacttgggatgtccttttgtccaaaat
cacttccgccccgagggacttaaggccaaggttatttacagcaagcctctcaagacattt
gctattaagccagaggtggacacccttcttgctgaaccgggcaagtgcaattccatagtg
gatagtcgagggagaaacaaggacttgctgagcagcctcccagtggaagtgctcaagtac
attgcaggattcctggacagcttcagtttatctcagctatcacaagtgtcagtgctcatg
agggacatctgtgcaactcttcttcaagagaggggaatggtcctgctggtttgggagaaa
aaaagatattcccatggtggtacttcttggagagctcgcaaaaagatctggcagttcagc
agcctgttctccagagttcacaactggcagcgcagcgacgtcccgagcatgtcagagcac
ctgaggaattgtcccttctaccaggcagagcacaggacagaccccgtgctgctgacgggc
atgagcgaatctcgggagcagactcgaaagactttggtctctactttcaggcacagagtc
tga
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