Lonchura striata (white-rumped munia): 110480858
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Entry
110480858 CDS
T05897
Symbol
CLSTN3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsr04515
]
110480858 (CLSTN3)
Cell adhesion molecules [BR:
lsr04515
]
Cadherins
Cadherin related
110480858 (CLSTN3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
SMN_G2-BD
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
110480858
NCBI-ProteinID:
XP_021404811
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All DBs
Position
1:complement(87982675..87998073)
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AA seq
1017 aa
AA seq
DB search
MLQCGRGRAGRGALPEVPPSLRAAAAGARAWVRPGPAAAAAAMGDPRPRAAVLLPLICLC
AALPGSASNKANKHKPWIEAEYQGIIMENDNTVLLNPPLFALDKDAPLRYAGEICGFRIH
GSGVPFEAVILDKATGEGLIRAKEPVDCEAHKEHTFTIQAYDCGEGPDGANTKKSHKATV
HVRVNDVNEFAPVFVEKLYRVAVTEGKLYDRILRVEAIDGDCSPQYSQICYYEILTPNIP
FLIDNDGNIENTEKLQYSADRVYKFTVTAYDCGKKRASDDAEVEIQVKPTCKPSWQGWNK
RIEYTPGAGSLALFPTIHLETCDEPLWNIQATVELQTNHVAKGCDRDNYSEKSLRKLCGA
ASGEIDLLPVPSPTANWTARLSVHYSQDSSLIYWFNGSQAAQVPVVNGPNGHEGLSDHFT
LSVWMKHAVVPSKGRREEETVICSTVRSEDGYSHYSLAVHGCRISFLYWPLLESARPVKF
LWKLEQVCDDEWHHYALNLEFPTVTLYVDGVSYDPALIHDNGLIHPPRPEPSLMIGACWA
EEKTKEKTKGSENATDSVQGDPLSIHHYFHGYLAGFTVRPGSLESREVIECLYACREGLD
YSDFDSLGKGMKVHVNPSQSLLTLEGDDVETFNHAIQHVAYMNSLRFATPGVRPLRLTTA
VKCFSEESCVSIPDVEGYVVVLQPDAPQILLSGNAHFAHPASDFEAPEGIPLFPNLQITC
SISHQVEAKKDENWHGTVTDTRMSDEIVHNLDGCEISLVGDDLDPEREYLLLDGALLQQR
GLELVNTSAYLTITGVESIAVYEEILRQVSYHINHGAALYERKFHLSCTEMNGRYSSNEF
TVEVNVLHNMNRAAHPNHILSSQQFVHRGHHLPAELSGHSLASTHNNPMVPSAATVIIVV
CVGFLALMVILGILRIHSLHRRGMVQEVPGAAESGHTSTGGKESDMFWDDSALTIIVNPM
ESYQSCQERAAGSVEGRAGEGVEDDDDSTDSETPDSPDSTDMNDRHIIGKSDVSHRY
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagtgcgggcggggccgggcggggcgcggagcgctgccggaggtgccgccgtcc
ctgcgcgccgccgccgcgggagcgagggcgtgggtccggccgggacccgccgccgccgcc
gccgccatgggcgaccctcggccccgcgccgccgtcctcctcccgctgatctgcctctgc
gccgcgctgcccggcagcgcctccaacaaagcaaacaagcacaaaccatggattgaagcc
gagtatcagggcatcatcatggagaatgacaacaccgtcctgctcaacccgccgctgttt
gcgctggacaaagatgccccactgcgctatgcaggtgaaatctgtggcttcaggatccat
gggtcaggggtaccttttgaagctgtgatcctggacaaagctacaggagaggggctgatc
cgggccaaggagccagtggattgtgaagcgcataaggagcacacatttaccatccaggcc
tatgactgtggagagggacctgatggagcaaataccaaaaaatcacacaaggccacagtg
cacgtgcgagtaaacgatgtgaatgagtttgctcccgtctttgtggagaagctgtatcgc
gtggcagtgacggagggaaagctgtacgaccgcatcctgcgtgtggaggccatcgacggg
gactgctcgccgcagtacagccagatctgctactatgagatcctgaccccaaatattccc
ttcctcattgacaacgatgggaacatcgagaacacggagaaactgcagtacagtgcagat
cgtgtctacaaattcacagtgacagcctatgactgtggaaagaagagagcttctgatgat
gctgaagtggaaatccaggtgaaacccacctgcaagcccagctggcagggctggaataag
aggattgagtatacccctggcgcaggcagcctcgcgctcttccccaccattcacctggag
acctgtgatgagccactgtggaacatccaggccaccgtggagctgcagacaaaccatgtg
gccaagggctgtgaccgggataactactccgagaagtccctgcgcaaactctgtggtgct
gcctcaggagagattgacctgctgccagtgcctagccccacggcaaattggacggcacgg
ctctcggtgcactacagccaggacagcagcctcatctactggttcaatggcagccaggcc
gcccaggtgcctgtggtgaatgggccgaatggccacgaggggctgagtgaccacttcacc
ctgtctgtgtggatgaagcatgccgtggtgcccagcaaaggcaggcgagaagaggagact
gtgatctgcagtacagtgcggagcgaggatggctactcccactactctctggctgtgcat
ggctgccggatttctttcctctactggccgttgctggaaagcgcaaggcctgtgaaattc
ctctggaagcttgagcaggtctgtgacgacgagtggcaccattacgccctcaacctggag
ttccccacggtcacgctgtacgtggatggcgtctcctacgaccccgccctgatccacgac
aacggcctcatccacccgccgcggccggagccttccctcatgatcggggcctgctgggcc
gaggagaaaaccaaagagaaaaccaaaggaagtgagaatgccactgactctgtgcaagga
gatcctctgtcgatacaccactacttccatggttacttggctggcttcactgtgcgccct
ggtagcttggagagccgggaggttattgaatgcctgtatgcctgccgtgaggggcttgat
tacagtgacttcgacagtctgggcaaagggatgaaggttcatgtgaacccctctcagtcc
ctgctcaccttggagggtgatgatgtggaaaccttcaaccacgcgatccagcacgtggcc
tacatgaattccctgcgctttgctacccctggggtccggccactcaggctcaccactgct
gtcaagtgcttcagtgaggagtcctgtgtctccattcctgatgtggaaggctatgttgtg
gtgctacagcctgatgccccgcagatcctgctgagtggcaatgcccactttgctcatcct
gcatcagactttgaggctccagaaggaattcccctgttccccaacctccagatcacctgc
tctatttctcaccaggtggaggccaagaaggatgagaactggcacggtactgtgacagac
acacgaatgtcagatgagattgtgcacaacctggatggctgcgagatctcactagtagga
gatgacttggacccagagagggagtacctgctcctggatggggcactgctgcagcagcgg
ggcctggagctcgttaacacctctgcctacctgaccatcacaggagtggagagcattgca
gtttacgaggagatcctacgccaggtctcctaccacatcaaccatggtgctgccctctat
gaaaggaagtttcacctgtcctgcaccgagatgaacggtcgctactccagcaatgagttt
actgtcgaggtgaatgttctccacaacatgaacagagctgctcatcctaaccatattctg
agctcccagcagtttgtgcaccgaggtcatcatttacctgcagagctgtctgggcacagt
ttggcaagcacccacaacaacccaatggttcccagtgctgccactgtcatcatcgtggtg
tgcgtgggcttcctggcacttatggtgatcctcggcatcctgcgcatccactccctgcac
cgccggggaatggtgcaagaggtccctggggctgctgagtcggggcacaccagcactgga
ggcaaagagagtgacatgttctgggacgactcggccctcaccatcatcgtcaaccccatg
gagtcctaccagagctgtcaggagagggcagcagggagtgtggagggcagagctggcgag
ggcgtggaggatgatgatgacagcaccgactcggagacacccgactccccggacagcact
gacatgaatgaccggcacatcattggcaaaagtgacgtctctcaccgctactag
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