Lonchura striata (white-rumped munia): 110480860
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Entry
110480860 CDS
T05897
Symbol
STXBP5L
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110480860 (STXBP5L)
Membrane trafficking [BR:
lsr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110480860 (STXBP5L)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
110480860 (STXBP5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Prp19
ANAPC4_WD40
WD40
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Synaptobrevin
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
110480860
NCBI-ProteinID:
XP_021404814
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All DBs
Position
1:complement(89848898..90027370)
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AA seq
1203 aa
AA seq
DB search
MKKFNFRKVLDGLTAASPVGSSSGGSGSGAGGSVHPGGTAGAAGTPREEIQETLTSDYFQ
ICKTVRHGFPYLPTALAFDPVQKILAIGTRTGAIRILGRPGVDCYCQHESGAAVLQLQFL
INEGALVSACADDALHLWNLRQKRPAILHSLKFNRERITYCHLPFQSKWLYVGTERGNTH
IVNIESFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENGTIVFWDLRS
KRADLRAYYDEAIHSVAWHHEGKQFMCSHSDGSLTLWNLKSPNRPFQTTIPHGKVQRDGK
KPESCKPILKVEYKTCKNSEPFVIFSGGLSYDKPCRRPSLTIMHGKAITVLEMDHPIVDF
LTLCETPYPNEFQEPYAVVVLLEKDLIVVDLTQSNFPIFENPYPIDIHESPVTCTEYFAD
CPPDLIPVLYSVGAKHKKQGYSNKEWPISGGAWNLGAQTYPEIIITGHADGSVKFWDASA
ITLQMLYKLKTSKVFEKQKVGEGKATAEIVEEDPFAVQMMYWCPESRIFCVAGVSAYVIV
YRFSKHEVNTEIASLEVRLQCEVEDIITPEPETNPPFPDASSQLPSLKSLSGSTNTVACE
GTMKDSIPCLSVKARPVRMPPGYQADLVIQLVWVDGEPPQQITSLAVNSAYGLVAFGNCN
GLAVVDFMQKTVLLSMGTLDLYGSSDPYQRQPRSPRKSRQFAADNFCMRGLSNFYPDLTK
RIRTSYQSLTELSDSPVSLELERCKSPTSVKGSRKLSLPTDLKTDLDHVNGHCTSPTSQS
CSSGKRLSSADVSRANRRGPGRPPFRKAQSAACMEISLPVTTEENRENSFSRSRSSSVSS
IDRDSKEAITALYFMESFARKNDSAVSSCLWVGTGLGMVIILSLNLPASDDLRQSEPVMV
SPSGTVLTLKGAVLTFACLDCMGTLTNQPYEVWRDPHSADDGDKTRKRKLVMHSPSSSQD
MGDHQFAVICSEKQAKVFSLPSQTCLYVHNITETSFLLRADVVTLCNSVCLACFCANGHI
MTLSLPSLRPLLDINYLPVTDMRIARTFCFTNEGQALYLSSPTEIQRLTYSQEMCDNLQD
MLGDLFTPVETPEAQNRGFLKGLFGGSGQAFDREELFGEATAGKASRSLAQHIPGSGGIE
GVRGAAGGVIGDLTRARIALDERGQKLGELDERTASMMASAEAFSKHAHEVMLKYKDKKW
YQF
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttaattttcgcaaagttttggatggtttaactgccgcatcccctgttgga
agcagtagcggtggcagtggaagtggggctggtggctccgtgcacccaggagggactgcg
ggagctgcagggacacccagagaggagatccaggagacgctcacttcagattattttcaa
atctgcaagacggttcgccatggatttccttacctacccactgccttagcttttgaccca
gttcagaaaattctggcaattggaacaagaacaggagccatacgaatattgggcaggcct
ggtgttgattgctactgccaacatgaaagtggtgctgcagttctgcagctccagttctta
atcaatgagggtgctttggtcagtgcgtgtgcagatgatgcacttcatttgtggaatctc
cgacagaaacgaccagctattctacattctctgaaatttaacagagaaaggattacttac
tgccatctacctttccagagtaaatggctttatgttggaacagagagaggaaatacacac
attgtaaatattgagtccttcattctttctggatatgttatcatgtggaacaaggcaata
gaactatccaccaagactcaccctggcccagttgtacatttaagtgacagcccaagagat
gaaggaaaactgttgataggctatgaaaatgggaccatcgtgttctgggacctgcgatct
aaaagagccgatctgagagcttattatgatgaggctattcattctgttgcttggcatcat
gaagggaaacagtttatgtgcagtcactctgatggcagcttgaccctatggaatctgaaa
agccccaacagaccattccagaccacaattccacatggaaaagtccaaagagatggaaaa
aaacctgaatcttgtaaaccaattcttaaagtagagtacaagacctgtaaaaacagtgaa
ccatttgtgatattttctggtggattgtcctatgataagccttgtcgaagaccaagctta
acaatcatgcatgggaaagcaattacagttcttgaaatggatcatcctatagttgatttt
ttaactctttgtgaaaccccatatccaaatgaatttcaagaaccctatgctgtagttgtg
cttttggaaaaagatctcattgtcgttgacctgacacaaagcaattttccaatctttgaa
aatccatatcctattgacattcatgagtcacctgttacctgcacagaatattttgcggac
tgtcctccagatttgatccctgtactctattctgtaggagcaaaacataaaaagcaagga
tacagcaataaggagtggcctatcagtggtggagcatggaaccttggagctcagacatat
cctgaaatcattattacaggccatgcagatggatcagtaaaattttgggatgcttctgcc
attactctacagatgttgtacaaactaaaaacatcaaaggtctttgaaaaacagaaagtg
ggagaaggaaaagcaacagctgagattgtggaagaagatccttttgctgttcagatgatg
tactggtgtcctgaaagcagaattttctgtgtggcaggagtttctgcatatgtgattgtt
tataggttcagcaaacatgaagtaaatactgaaattgcatcattagaggtacgacttcag
tgcgaagtagaagacatcattactcctgaaccagaaacaaatcctccatttccagatgcc
tcctcccagcttccttctttaaaaagcctttcaggcagtaccaacactgtagcatgtgaa
ggaacgatgaaggacagtatcccatgtcttagcgttaaggctcggcctgtgcggatgcct
cctggctaccaggcagatctggttatccagttggtgtgggtggatggtgagcctccacaa
cagattaccagccttgctgtaaactctgcttacggactagtggcgtttgggaactgcaat
ggtttggcagtcgtggatttcatgcagaaaacagtcctgctgagcatgggcaccctcgac
ctctatggatccagtgatccgtaccagcggcagccccgctcgccccgcaagagcaggcag
tttgctgcagacaacttttgcatgcgtggcctgtctaacttttatccagatttaacgaaa
cggatccgtacttcctatcagagcctgactgaactcagtgacagtccagtttccctggag
cttgagcgttgcaagtctcccacttcagttaaaggatcaagaaagttaagtctgccaaca
gatcttaagactgatcttgatcacgtgaatggccactgcacaagcccaacatcccagagc
tgcagctcaggcaagcgactttccagtgcagatgtgtcgagagcaaaccgccgagggccc
ggcaggccccccttcaggaaagcccagtctgcagcctgcatggagatctctctcccagtc
accacagaagaaaatagggaaaactccttcagccgttcccgaagctccagcgtgtccagt
atcgacagggactcgaaggaggcaatcacagctttgtacttcatggagtcctttgcccga
aagaacgactctgctgtttcctcctgtctctgggtcggaacaggcctcggaatggtcata
atcctgtcccttaatctgcctgctagtgacgacttacggcagtcagagccagtcatggtg
tcaccaagtggcaccgtgctgacactgaagggagccgtgctgaccttcgcgtgcttggac
tgcatggggacattgacaaatcagccctatgaagtatggagggatccacacagtgctgat
gatggtgacaaaacaaggaaaaggaaacttgtcatgcattccccttcctcctcccaggat
atgggtgatcatcaatttgcagtcatttgttcagaaaaacaagccaaagtcttctcattg
ccttcccaaacatgtctttatgtccacaacatcaccgaaacgtcctttttattgcgagca
gatgtggtcaccctctgtaacagcgtctgtctggcgtgcttttgtgctaatgggcacatc
atgactctgagcttgcccagccttcgcccactgctggacatcaactatttgcctgtcaca
gacatgaggatagcacggaccttttgtttcactaacgaagggcaggctttgtacctgagc
tctcccaccgagatccagcgcctgacctacagccaggagatgtgtgacaacctgcaggac
atgcttggggatttgtttactcctgtggaaacaccagaagcccaaaacagaggcttcctc
aaaggactttttggaggaagcggacaagcttttgacagggaggagctttttggcgaggcc
acagcaggaaaagcctctcgcagcctggcgcagcacatccctggatccggcgggatcgaa
ggcgtgagaggagccgcaggtggggtcattggggacctgactcgtgcgcgcattgccctg
gacgagaggggacagaagctgggcgagctggatgaaaggactgccagcatgatggccagc
gcagaggcgttttccaaacatgcacatgaggtgatgctcaaatacaaggacaaaaagtgg
taccagttttag
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