Lonchura striata (white-rumped munia): 110480896
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Entry
110480896 CDS
T05897
Symbol
SEC31A
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110480896 (SEC31A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110480896 (SEC31A)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lsr02044
]
110480896 (SEC31A)
Membrane trafficking [BR:
lsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110480896 (SEC31A)
Secretion system [BR:
lsr02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
110480896 (SEC31A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
TPR_Sec16
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_HPS5
Prp18
Beta-prop_WDR35_TULP_N
SRA1
Beta-prop_DCAF4
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
110480896
NCBI-ProteinID:
XP_021404886
LinkDB
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Position
4:15734035..15773038
Genome browser
AA seq
1281 aa
AA seq
DB search
MKLKEVDRTAMQAWSPAQQHPIYLATGTSAQQLDATFSTSASLEIFELDLADPSLDMKSC
ATFSSSHRYHKLIWGPHSMTSGDRVSGVLIAGGENGNVILYDSAKIIDGEAEVIIAQKDK
HTGPVRALDVNMFQTNLVASGANESEIYIWDLNNFATPMTPGVKTQPLEDISCIAWNRQV
QHILASASPSGRATVWDLRKNEPIIKVSDHNNRMHCSGLAWHPEVATQMVLASEDDRLPV
IQMWDLRFASSPLRVLESHTRGILAIAWSLADPELLLSCGKDAKILCSNPNTGEVLYELP
TNTQWCFDIQWCPRNPAVLSAASFDGRISVYSIMGGSADGLRQKQVDQLSSSFGNLDPFG
TGQPLPPLQLPQQTAPQSVVMPLKKPPKWIRRPMGASFSFGGKLVTFENSKPPQQPGMEQ
QQQHPHVYVSQVVTEKEFLARSNQLQEAVQSQGFVSYCQKKIDMALADFERNVWAFLKVN
FEEDSRVRYLELLGYRKDDLRKKITSALNKEGLPDGVLGEAPTESDGSVPNEGDEGQTTE
EQFLGETLKDHKKETEDLGSAKTTFNISVSGDVDGLITQALLTGNFESAVDLCLHDNRMA
DAIILAIAGGQELLSRTQEKYFAKMQSKITRLITAVVTKNWKEIVQSCDLQNWREALAAV
LTYARPDEFTALCDLLGSRLENEGDSVLQTQACLCYICAGNVDKLVACWTKVQDGNSPLS
LQDLIEKVVILRKAVQLTQAVDPNAMGTLLAEKMSQYANLLAAQGSLAAALTFLPANTNQ
PNIVQLRDRLCRAQGELPVGQDGLKGQYEREPMPKGRAGPVAGRMQAPQAPAQQYYQQVR
IAPTVTTWSNKTPTALPSHPPAGCPSDTQGDNPPPPGFIMPGAVGPSMPPQQATSSNYSM
YPQAGTRPVYPQTYQATQQYSSGTGGPALYQPQQPIAAPASASYPSPAPNTTPSYVPSAP
AHSVPSPLYPGQPQPSPTSLNPISSFPVPPAGTSFQHGRPGLPATSVAYALPTGPTGTLP
ATSDLPASQRTESLPSQDQASPFAGELGPQNGWNDPPTLNRAAKKKKVPDNFLPPVPITS
PIMNPLADPQSQMQQPQAPAPPSNAPSFQPPHLPSGQMVLQGGFQPAAQPLGPSTMPPTV
SKPSTEGAPGAPIGNAIQHVQALPTEKITKKPIPEEHLILKTTFEALIQRCLLSASDPQT
KRKLDDANKRLEFLYDKLREQTLSPTIISGLHNIVKSIETRNYQEGLNIHTHIVSTSNFS
ETSAFMPVLKVVLTQANKLGV
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaaggaagtagaccgtactgccatgcaggcatggagccctgcccagcagcac
cccatttacctggctacaggtacatcagctcagcagctggatgcaaccttcagtacaagt
gcttctctagaaatatttgagttggacttagcagacccttcactggatatgaagagctgt
gccacattctcctcctcacacaggtaccacaagctgatctggggccctcacagcatgacc
tcaggggacagagtgtctggagtcctgattgctgggggtgaaaatggaaatgtcatcttg
tatgactcagccaaaatcatagatggagaggctgaagtaataatagcccagaaagacaag
cacacgggaccagtgagagcgctcgatgtcaacatgttccagactaatctggtagcctct
ggtgctaatgagtctgaaatctatatctgggacttgaacaactttgctacaccaatgaca
ccaggagtgaagacacagcctctggaggacatcagctgcattgcatggaacaggcaagtg
cagcacatcctggcctccgccagccccagcggccgggccaccgtctgggacctcaggaag
aacgagcccatcatcaaagtcagtgaccacaacaacaggatgcactgctcaggcttggcg
tggcaccctgaagttgccacccagatggttttggcttcagaggatgataggctgcctgtt
attcagatgtgggacctaagatttgcctcctcaccacttcgtgttctagaaagtcacaca
aggggtatattggccattgcttggagtctggcagatccagagctgctacttagctgtggg
aaggatgctaaaattctctgctccaaccctaacacgggcgaggtgctgtacgagctgccc
accaacacccagtggtgctttgacatccagtggtgcccaaggaaccctgctgtgctgtct
gcagcctcctttgacgggcgcatcagtgtctactccatcatgggcggcagcgccgatggc
ctgaggcagaagcaagttgaccagctctcctcgtcttttgggaaccttgatccatttggc
acgggccagcccctgcctcccctgcagcttccccagcagactgccccacagagtgtggtg
atgcctctgaagaaaccacccaagtggatccggcgacccatgggagcgtccttctcgttt
ggaggcaagctggtgacatttgagaattccaagcctccgcagcagccgggcatggagcag
cagcagcagcatccccatgtctacgtgagccaggttgtcacagagaaggagttcctggcc
cgctcaaaccagctgcaggaggctgtgcagtcccagggctttgtcagctactgccagaag
aaaatcgacatggccctggctgactttgagaggaatgtgtgggccttcttaaaggtgaac
tttgaagaagattcacgtgttagatacctcgagctcttaggataccggaaggatgatctg
aggaagaagatcacatctgctctgaataaagaaggtcttccagatggtgtcttgggagag
gctcctacagaatctgatggatctgtgccaaatgagggggatgaaggccagactacagag
gaacagttcttgggagagacgctgaaggaccataaaaaagaaactgaagatttgggatct
gcaaagacaacatttaacatttctgttagtggagatgtggatgggctgatcacacaggct
ctgctgacagggaactttgaaagtgcagtggatctgtgcctgcacgacaaccgcatggct
gatgccatcatcctggccatcgccggcgggcaggagctgctctcccggacgcaggagaag
tactttgccaagatgcagagcaaaatcaccaggctcatcactgcagttgtgacaaagaac
tggaaagagattgtgcagtcttgtgacctgcagaattggagagaggcattggctgctgtg
ctcacttatgccaggccagatgagtttacagccctttgtgatctcctgggtagcaggctg
gagaatgagggggacagcgttctacagacacaagcttgcctctgttacatttgtgctggc
aacgtggataaacttgttgcttgttggaccaaagttcaggatggaaacagccccttgtcc
cttcaggatttaatagagaaagtcgtgatcctacgcaaagccgtgcagctcacgcaggct
gtggacccgaacgccatgggtacccttttggctgagaagatgagccaatatgccaacctc
ctggctgctcagggaagcctggctgcagcactcaccttcctccctgccaacaccaaccag
ccaaacatcgtgcagctacgggacaggctgtgcagagcccagggggagctcccagtggga
caggatggcctcaagggacaatatgagagagaacccatgcccaaagggcgagctggcccc
gtggctggacggatgcaggcgccccaggctccagcccagcagtattaccagcaggttaga
attgcccctactgtcactacctggagtaacaaaactcctactgcccttcccagccatcct
cctgcaggctgtccctctgacacacagggggacaacccacctcctccagggtttattatg
ccaggagctgttggccccagcatgccaccacagcaagccacatcttccaactacagcatg
tacccgcaagcaggaacacggccagtgtacccacagacatatcaggccacacagcagtac
tcctctggaactgggggaccagctctctatcagcctcagcagcctattgctgcccctgct
tcagcctcctaccccagccctgcccctaacaccaccccctcctacgtgccctctgcccct
gcccactccgtgccctccccgctgtaccccgggcagcctcagccctccccaacgagcctg
aatcccatctcttccttccctgttcctcctgctggcacatcctttcagcatggcaggcca
ggacttccagcaacttctgtggcttatgcattacctactggaccaacaggtactctgcct
gcaaccagtgatcttcctgcatcccagagaacagaaagtctaccatctcaagaccaggcc
tctcccttcgcaggtgaactagggcctcagaacggctggaatgaccctcccaccctcaac
agagctgccaagaagaagaaggttcctgacaacttcctgcccccggtccccatcacctcc
cccatcatgaacccgctggcggacccgcagtctcagatgcagcagccccaggctccagca
ccacccagcaatgcccccagcttccagcctccacacctgccttcagggcagatggtgctg
caaggtggcttccagcctgctgcccagcccctggggccatccaccatgccacccactgtt
tccaaacccagcacggagggggccccgggggccccgatcggcaacgccatccagcatgtg
caggcactgccaacagagaagatcaccaagaagcccatccctgaggagcaccttattctg
aagactacatttgaagctctcatccagaggtgcctgctgtctgcctctgatccgcaaacc
aagaggaaactggatgatgcaaataaacgcctggagtttctgtatgacaaacttagggaa
cagacactctctccaaccatcattagtggcttgcacaacattgtgaagagcatcgagacc
cgcaactaccaggagggactgaacatccacacacacattgtcagcaccagcaacttcagc
gagacctctgctttcatgccagtcctcaaggttgtcctcacccaggccaataagctgggg
gtgtga
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integrated database retrieval system
