KEGG   Lonchura striata (white-rumped munia): 110480934
Entry
110480934         CDS       T05897                                 
Symbol
PTPN13
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 13 isoform X1
  KO
K02374  tyrosine-protein phosphatase non-receptor type 13
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    110480934 (PTPN13)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lsr01009]
    110480934 (PTPN13)
Protein phosphatases and associated proteins [BR:lsr01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Classical)
   Non-receptor PTPs
    110480934 (PTPN13)
SSDB
Motif
Pfam: PDZ Y_phosphatase PTN13_u3 PDZ_6 FERM_M FERM_C PDZ_2 FERM_N Tc-R-P KIND DSPc PTP-SAK PH_FAN PTPlike_phytase RA_2 PTP-NADK SNX17-27-31_F1_FERM
Other DBs
NCBI-GeneID: 110480934
NCBI-ProteinID: XP_021404968
UniProt: A0A218V426
LinkDB
Position
4:complement(15094151..15206815)
AA seq 2513 aa
MHVSLAEALEVRGGPLQEEEIWAILNQSAESLQELFRKADPTALGFIISPWSLLLLPSGS
VSFTDENVSQQDLRAFTAPEVLQNHSLSSLSDVEKVHIYSLGMALFWGADHEVPQSQPIK
LGDHLNSILLGMCEDVVYARVSVRTVLDACSAHIRNSNCAPSFSYVKQLVRLVLGSLSGM
DQLSCNGDRKLQPDRSQAIRERLRGKGLPTGKALTVDAPDGHRAHFSRQTTLNKGLSKSM
GFLSIRGTRDEEEFFQGISADYSSGQEDVFCPHRCKTSELEKKGHLHTDVPPKRKIWASS
TDLLCTTDKAAERDHAGGPHRHSHQCETFTVRTSTAARNKEARYSDGSIALDVFGPQKLD
QTHHMPETSTSAAISSAFDRIRERQKKLQLLREAMNVEEPLRRYKSYHSDVYSTSSESPS
VISSEPDFRQVRRNEAFKRDDASGVLSGADDISTSSQANSQRTRQLEAPFEGKLISQEVM
LKRQEEEMMQLQARMALRQSRPNLYPGDAIRSSMLDITRDPLREIALETAMTQRKLRNFF
GPEFVKMTIEPFISLDLPKSILTKKGKSDDTRRKVNVMLLSGQKLELTCDTKTICKDVFD
MVVAHIGLVEHHFFGLATLKDNEFFFVDPDIKLSKVAPEGWKEEPKKKNKPPVNFTLFFR
IKFFVDDVSLIQHTLTCHQYYLQLRKDILEDRMHCDDETALLLASLALQAEYGDYQAEVH
GLSYFRLEHYVPARVLEKLDLSYIKEELPKLHSTYVGASEKETELEFLKLCQRLTEYGVH
LHHVLPEKRSQTGILLGVCCKGVVIFEVHNGARTPVLRFPWRETKKISFSKKKITLQNTS
DGIKHSFQTDNSKTCQYLLHLCSSQHKFQLQMRTRQSNQDTQDIERASFRSLNLHADSVK
GFNMGRAISTGSLASSTLNRLAVRPLSVQAEILKRLSCSELSLFQPLPGSARDKNEKSPW
EERPRVMSKSFHDLSQSHISVYPSKKNVITALNSSPKKIEDIMGRVFQQMPKFDPGSATG
ALKPGNSKSHAGLSRSPERKKNESDSSSIEDTGQAYVVGVSMNTSENHLSSAALKESVDS
LQTTQNRVATPEREITLVNLKKDKKFGLGFQIVGGEKTGKLDLGIFIHSVIPGGPADLEG
TLKPGHRLISINSTSLEGVSQHAALEILENAPEDVTLVISQPKDKLSKALSSTAPISNGA
RGYLRRPSSVQDNEAESSSEEHSRCRGHQRPALGSLSGLSGGKRDGSVSSQDSRTESASL
SQSQAASFFGKRASGRAQQDAQHCGESQAGASKAIEKRRSSSDSTQTKVKRPGVAEPVEY
SDRGDSDMDEATYSGSQEQQPAKKDSSSSNTANKVNSKKVSTTLLKPGDIFEVELAKKDN
GLGISVTGGVNTSIRHGGIYVKAIIPKGAAEADGRIEKGDRVLSVNGISLEGATHKQAVE
TLRNTGQVVHLLLEKGQLSGAKAHAPVTPQCTLPSQVGQCEPQEKPATESSNAKDYSFVT
AENTFEVKLLKNSSGLGFSFCREDNLTPEQLGSTIVRVKKLFPGQPAAESGQIEIGDVIL
KVNGASLKGLSQQEVISALRGTSPEVSLLLCRPPSGILPEIDPSLLTPIHSPQQVFPEVS
REVSGPSNREQGDSSDENETTDLSKKRLKSPSRRDSYSDSSRSGDEDVESAAQLGLGWSS
VLYQSSGEAEARAQSQYEAHPGQKDAVRTILYPDQEAPGKAELEDSDLPLDLPVIPTCRT
VPDVTTSMLINDCYATSVSELTSHLGEIDSLLTQLEKNAEEYEPEVELQVTLTKSEKGSL
GFTVTKGNDSVGCYVHDIVQDPAKSDGRLRPGDRLIKVNDIDVTNMSHTDAVNFLRAAPR
TVTLVLGRVLELPKMPVLPHLLPDITLMCHKEELGLSLSGGHDSVYQVVYISDILPKSVA
AREESLHVLDIIHYINGVSTQGMTLKEAKRMLETCLPTVVLKVTRDGHAVFPKSKSPEDS
SPWPVKANGCSCGDPCDKAEKSTDAYGPKVNGNGILGPSEGNTENNVHHTKALMNLSGAE
DAPSLGFTNQMSDFPKHIDKSGTEAPDDEYYDEDDHNEVVQYLLDVVDEEAQNLLNQNNA
ISEAQSLLHPKKAASENHLPVEMNGRVTEDKSEDTDCDGSSLPEDFSEATHVNGCEDYCE
VKAVPERSPPQPSLSQADEEEITWGSDELPIESVSQERVNKDFPLVTNEEISALPTVNVL
PGGKYSGAKLKSVIRMLRGLLEQGVPSKEIENLQELKPLDQCLVGQAKENRRKNRYKNIL
PYDTTRVPLGVEGGYINASFIRMPVGNEEFVYIACQGPLPTTVADFWQMVWEQNCTVIAM
MTQEVEGEKIKCQRYWPDVLNKTTMINDRLRLALVRLQQLKGFIIRVLELEEIQTGEVRH
ISHLNFIAWPDHDTPSQPDDLLTFISYMRHVHKAGPIITHCSAGIGRSGTLICIDVVLGL
ISRDLDFDISDLVRTMRLQRHGMVQTEDQYIFCYQVVLYVLNQLQDEEKQRDK
NT seq 7542 nt   +upstreamnt  +downstreamnt
atgcatgtgtcactagcagaggctctggaggttcgggggggaccattgcaagaagaggaa
atatgggctattttgaatcaaagtgcagaaagccttcaggaactattcagaaaagctgat
cctactgctctgggattcatcatttctccgtggtctctcctgttgcttccatctggcagt
gtgtcatttactgatgaaaatgtgtcccaacaagacctgcgagcgttcacagcaccagag
gttctgcagaaccactcactgtcatccctgtcagatgttgaaaaggtccatatctattct
cttggtatggcactcttctggggagctgaccacgaagttcctcaaagtcagcctatcaag
cttggagaccatctcaacagcatcctcctgggcatgtgtgaagatgtcgtttacgcccgt
gtgtctgtgcggactgttctggatgcctgcagtgcccacataaggaacagcaactgtgcc
ccttctttctcctatgtgaagcagttggtcagactggttctgggaagcctgtctgggatg
gatcagctgtcttgtaatggagatagaaagttgcagccagacaggagccaggctattcgg
gagaggctgaggggaaaagggcttcccacaggaaaagcattgacggttgatgcacctgat
ggacacagagctcacttctctcgacagaccacccttaacaaaggacttagcaaatctatg
ggatttctgtccattagaggaacacgagacgaggaagaatttttccagggcatttctgca
gattacagttcgggtcaggaagatgttttctgtcctcataggtgtaaaaccagtgagctt
gagaaaaaaggtcaccttcacacagatgtccctcccaaacggaaaatatgggcttcttcc
acagatttgctttgcactactgacaaggcagctgagagggaccatgctggaggccctcac
aggcacagccatcagtgtgaaacatttacagtacggacttctactgctgccaggaacaag
gaagcaagatattctgatgggagcatagcactggatgtcttcggaccacaaaaactggac
caaacacaccacatgcctgagacatcaacttctgcagcaatatcaagtgcctttgacagg
ataagagagagacagaagaagttgcagcttctgagggaagctatgaatgtagaagagcct
ttgagaaggtacaaatcttatcacagcgatgtttatagtacttcgagtgaaagtccatct
gttatttcttcagaaccagatttcaggcaagtgagaagaaatgaagctttcaagagagat
gatgccagtggtgtgttatcaggtgctgatgatatctccacatcaagtcaagctaattct
cagagaacaaggcagcttgaagcaccatttgaaggcaaactaataagtcaagaggtgatg
ctgaagaggcaggaagaagaaatgatgcaactgcaagccaggatggctctgaggcagtcc
cggcctaacctctaccctggggatgcaattagatcttccatgcttgacatcaccagagac
ccactgagggaaatagccctggaaacagccatgacacaaaggaaactgaggaatttcttt
ggcccagagtttgtgaaaatgacgattgagccattcatctccttggatctaccaaagtct
atcttgactaagaaaggcaagagtgatgacaccaggcgaaaagtaaatgtgatgcttctg
agtgggcagaagttggagctgacctgtgataccaaaacaatatgtaaagatgtctttgat
atggttgttgcccatattggcttggtggagcatcacttctttggattggctactttaaaa
gacaatgagtttttcttcgtggatcctgacataaagctaagtaaagtagctccagaagga
tggaaagaagaaccaaagaagaagaacaagcctcctgtcaacttcactctgttttttcgc
ataaagttttttgtggatgatgtcagtctcatacagcacacgctgacatgtcaccagtac
tacctgcagttgaggaaggacatcctggaagacaggatgcactgtgatgatgagacagcc
ttattattagcatccctagctctccaggctgagtatggagattaccaggcagaggtgcac
ggcttgtcctatttcagactagaacactatgtcccagcaagagtgctggagaaactggat
ctgtcctacatcaaggaagagctgccaaaactgcacagcacttacgtgggtgcctctgaa
aaagagacagagttagaatttctgaagttgtgtcagagactcacagaatatggggttcac
cttcatcatgtgctgcctgagaagagatcccaaacaggaatccttctgggagtgtgctgc
aaaggagttgtcatttttgaagttcacaatggtgcccgtacacctgtactgcgcttccca
tggagagagacaaagaaaatatcctttagtaagaagaaaataactttgcagaacacatca
gatggcatcaagcattcctttcagactgacaatagtaagacttgccagtaccttttgcat
ctctgctcttcccagcataagttccagctacagatgagaacaagacagagcaatcaagac
actcaggacattgagagggcttcatttaggagcctgaaccttcatgcagactctgtcaaa
ggcttcaacatgggccgagccatcagcactggcagcctggccagcagcaccctgaacaga
ctcgctgtccgacccctgtctgtccaagcagagatcctgaagagactgtcctgctctgag
ctctcactcttccagccactacctggctctgcaagggacaagaatgagaagagtccatgg
gaggaaagacccagagttatgagcaagtcgtttcatgatctgagtcagagtcacatctct
gtttatccctcgaagaaaaatgttattactgctttgaactcttcccccaaaaaaatagaa
gatataatgggaagggtctttcagcaaatgccaaaatttgatcctggatcagcaacggga
gcattaaagccgggcaattcaaaatctcatgcaggtttaagtagaagccctgaaagaaag
aaaaatgaatcagactcatcatccattgaagataccggtcaagcctatgttgtaggtgtt
agcatgaatacttcagaaaatcatctgtcatccgcagcattaaaagagagtgttgactct
cttcaaacaacacagaacagagtggccacaccagagagagagatcactctggtgaacttg
aaaaaggataaaaagtttggcttaggctttcaaatagtcggtggagagaagacagggaaa
cttgatctgggaatttttattcattcagttattcctggaggaccagctgatttggaaggg
actctaaaaccagggcaccgcctcatatccataaacagcacgagtttggaaggtgtcagc
cagcacgcagcgttggaaatcctggagaacgctcctgaggacgtgacgcttgtcatctcc
cagcccaaggacaagctgtccaaagcattgtctagcactgctcctatcagcaatggagcc
aggggttacttgaggaggccgtcctccgtgcaggacaacgaggcagagtcctcttcagaa
gagcacagccggtgccgtggtcaccagaggcccgctttggggagcctctccggattgtcg
ggaggcaagcgggacggaagcgtgagctcccaggactccaggaccgagagcgccagcctg
tcccagagccaggccgccagcttcttcggcaagcgtgcgagtgggagagcccagcaggat
gctcagcactgcggcgagtcccaggccggggcctcgaaggccatcgagaagagaagatcc
tcatcggacagtactcaaacaaaagtgaaaaggcccggggtggcagagcccgtggaatat
tctgaccgaggggattccgacatggatgaagcaacttactccggcagccaggagcagcag
ccagctaaaaaggattcttcctcatcgaatacagcaaacaaagtgaattctaaaaaagtt
tctacaacgcttcttaaacctggagatatctttgaggttgaactagcaaaaaaagataac
ggcttgggaataagtgtcacgggtggtgtaaatactagcataaggcatggtggtatttat
gtgaaagcgattattcccaagggagcagctgaagcagatggcagaatagaaaaaggtgac
cgtgtgctctctgtcaatgggattagtttggaaggagctacccataagcaagctgttgaa
acactgaggaacacaggccaggtggtgcacctgctgttggaaaaaggtcagctctcaggg
gccaaggctcatgctccagtgacaccacagtgcacgctcccaagtcaggtggggcagtgt
gagccacaggagaagccagcaacagaatcttcaaatgccaaagattacagctttgtcact
gcagagaacacatttgaggtaaaactcttgaagaacagctcaggcctcgggttcagtttc
tgccgtgaggataacctgaccccagagcagctgggatcaactattgtgagggtaaagaag
ctcttccctgggcagccagctgcagagagtgggcagatagagatcggggacgtcattctc
aaagtgaacggggcatcgctgaagggtctgtcccagcaggaagtcatctctgctctgagg
ggaacgtctccagaggtctctcttctcctctgccggccaccatctggaatactaccggag
atcgatccttcattgctgacccccatccattctccccaacaagtttttccagaggtcagc
agagaagtttctggtccatcaaacagagaacaaggtgacagctcagatgaaaatgaaact
actgatctgagcaagaaaaggctaaaatctccctccagaagagacagctacagtgacagc
agcagaagtggtgatgaggatgtggagtcagcagcccagctgggccttggctggagttct
gtgctgtaccagagctcaggggaagctgaggcacgggcacagagtcagtacgaggcacac
cctggtcagaaggacgctgttcgcaccatcctctatcctgatcaggaggctcccggcaag
gcagagctggaggacagtgatctgcctttggatttgccagtgatcccaacctgtagaact
gtacctgacgttaccacatccatgttaataaatgactgttatgctacttctgtctctgag
ctgacttcacacctgggagaaatagattcattactcacccagctggaaaaaaatgctgaa
gaatatgagccagaagtggagctccaagtgactctgacaaagtcagaaaagggcagtctg
ggttttacagtgaccaaaggtaacgacagtgttggctgctacgttcatgacatcgttcag
gatcctgccaaaagcgatgggagactacggcctggagaccgtctcataaaagttaatgac
attgatgtcactaacatgagccatactgatgcagtcaactttctgcgagctgccccaagg
actgtcacattagtgctagggcgagttctggagttaccaaagatgccagtgttgcctcat
ttgctgcctgacattacactgatgtgccataaggaggagctaggtttgtcattatcagga
ggccatgacagcgtttatcaagttgtgtatattagtgacattctccccaaatcggttgct
gccagagaggagagtctccatgtactagatattatccattacattaatggagtaagcaca
caaggaatgactctgaaagaagccaaaagaatgctggaaacatgccttccaacagtggtg
ctcaaagtgaccagagatggtcatgcagtgttcccaaaatccaaaagccctgaggactca
agtccatggccagtgaaagctaatggttgttcctgtggtgatccctgtgataaagcagag
aagtcaactgatgcttatgggcccaaggtcaatggcaatggcatcctgggaccttctgag
ggaaatacagaaaataatgtccatcacacaaaagcactaatgaacctctcaggagcagaa
gatgcaccttcccttggatttaccaatcagatgtcagattttcctaaacacattgacaaa
tcaggaacagaggctccagatgatgagtattatgatgaggatgaccacaatgaagttgtc
cagtatctgttggatgttgtagacgaggaagcccagaacctcttaaatcagaataatgca
atttcagaggctcaaagtcttctacatcccaagaaggctgcatcagaaaatcacctgcca
gtagagatgaatggaagggtgacagaagataagtctgaggatacagactgtgatgggtca
tctttacctgaagatttttcagaggctacacatgtaaatggttgtgaagactattgtgaa
gtaaaagctgtgccagaaagatcccctccacagccttccttgagccaggcagatgaggag
gagatcacgtggggaagcgatgagctgccgattgaatcagtcagccaggagcgtgtgaat
aaagatttccccctagtgacaaatgaagagatctctgcactccctacggtgaatgtgctc
cctggaggcaaatattcaggagccaaattgaagtcagtgatcaggatgttgcgtggattg
ctggaacagggagtcccttctaaagagattgaaaaccttcaggagttaaaacctctggat
cagtgtttagttggacaagcgaaggagaacaggagaaagaacagatataaaaacatactt
ccttatgacaccaccagagtccctctcggggttgaaggtggatacatcaatgccagcttc
attcgcatgcccgtggggaatgaggagttcgtttacattgcatgccaaggacctcttcct
actactgtagcagatttctggcaaatggtttgggaacaaaactgtactgtgattgccatg
atgactcaggaggtcgagggagaaaagataaagtgtcagcgttactggccagatgtgctc
aataaaaccaccatgatcaatgacagactacgcctggctcttgtgagacttcagcagctg
aagggcttcatcatcagagtgctggagctcgaagagattcagacaggtgaagtgcggcac
atttcccacctgaacttcattgcctggcctgaccatgacaccccctcgcagccagacgat
ctgctcaccttcatctcttacatgcggcacgttcacaaggcaggacccatcatcacccac
tgcagtgcaggcatcgggaggtcgggcaccctcatctgcatagacgtggtcctggggctc
atcagcagagacctcgatttcgacatctcggacctggtgcgcaccatgcgtctgcagaga
catggaatggttcagacagaggatcagtacattttctgctatcaagttgtcctttatgtc
ctgaaccaactccaggatgaagaaaaacagagagacaaataa

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