Lonchura striata (white-rumped munia): 110480967
Help
Entry
110480967 CDS
T05897
Symbol
FGD4
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 4 isoform X1
KO
K05723
FYVE, RhoGEF and PH domain containing 4
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
110480967 (FGD4)
Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
110480967 (FGD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
IQ_SEC7_PH
PH_13
FYVE_2
RHG20_PH
zf-RING_UBOX
Mcp5_PH
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
110480967
NCBI-ProteinID:
XP_021405043
LinkDB
All DBs
Position
1A:complement(59280922..59343021)
Genome browser
AA seq
848 aa
AA seq
DB search
MTFLTSGSSICPKPLILSRACAGGATARLVEQNVRYDAAQGINGSVALKQSPRSAASPKP
QVPPKPIHLQKATYQTPRHKALTNQKPRMEEETPAAVSSVTKEKSSKVSDLINRFEGGSS
LNPGDFKKDSSVLHITKSQGRYGSTPSPQPKLPSQHSLQKQGNSTTDRTQVAQLPMANGV
VVQEQREEEERRWPERGSAVSTPVPDDAMDSSLINGEGESSRRESLQSVAACEEQMLNSC
HRTLSSDTLLPPENETLGIDTDVKEEPAEECCKQDQPVETKETDEQKRHKIANELLQTEK
AYVSRLDLLDGVFYSRLLEEANRGSFPPEVINKIFSNISSINAFHSKFLLPELEKRMQEW
TTTPRIGDILQKLAPFLKMYGEYVKNFDNAMELVKTWTERSPQFKFIIQDIQKEKVCGNL
TLQHHMLEPVQRIPRYEMLLKDYLRKLPQDSLDWKDAEKSLEIISTAASHSNSAIRKMEN
LKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFLFNNMLLYCVPKFS
LVGSKFSVRTRVGIDGMKIIETHNEEYPHTFQVSGKERTLELQASSEQDKEEWIKALQST
IEAFQQRNETFRNAIAKEYEDMPVEVSNAELGKRAPRWIRDNEVTMCMKCKEPFNALTRR
RHHCRACGHVVCWKCSDYKAHLEYDGNKLNKVCKDCYHVIIGCTDSEEKKRKGILEIESA
EVSGNSVICSFLQYMEKSKPWQKAWCVIPKQEALVLYMYGAPQDVKALATIPLLGYTVDD
TPKSADLPHSFKLTQSKSVHSFAADNEELKQKWLKVIHLAVKGETPECQNELQVNLEEQP
ESSKKSEC
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgacatttctgacttcaggcagcagcatctgtccaaagcccttaatattgtctagagct
tgtgcagggggtgccacagccaggcttgtggagcagaatgtacgctatgacgcggctcag
ggaataaatggaagtgtggcactcaaacagtccccacgttcagctgcaagtccaaagcca
caagtgcctccaaagccaattcatctgcagaaggcaacataccaaacccctaggcataaa
gctttaacaaatcagaaaccaagaatggaggaagagacgcctgctgctgtttctagtgtc
acaaaggaaaagtccagtaaagtgtcagatctcatcaaccgttttgagggaggcagctca
ctgaatcctggcgatttcaagaaagattcctctgttctccacattactaaatctcaagga
agatatgggtccacaccatcacctcagccaaaactcccctcccagcactcactgcagaaa
cagggaaacagtaccactgacagaactcaggttgcacagctgcccatggccaacggcgtg
gtagtgcaagagcagcgggaagaggaggagcggaggtggccggagcgcggctcggccgtg
tccacccccgtcccggatgatgccatggacagcagcttgataaatggggaaggggaaagc
tctcgcagggagtccttgcaaagtgtggctgcctgtgaggagcagatgctcaacagctgc
cacaggactctgagcagtgacacgctgctcccacccgaaaatgaaactctaggaattgat
actgatgtcaaggaagagccagctgaggaatgctgtaaacaagatcaacctgtagaaaca
aaggagacagacgagcagaaacgtcacaaaattgccaatgaacttctgcaaacagaaaag
gcctatgttagccgacttgacctcctagatggggtattctattccagactccttgaggaa
gccaacagaggttcatttccacctgaagtgattaataaaatattttctaacatttcgtca
ataaatgccttccacagtaaattcttacttccggagcttgaaaaaagaatgcaagaatgg
actaccacgcctaggattggagatattctgcagaagttggctcctttcctcaagatgtac
ggcgagtatgtgaagaatttcgataatgcaatggaactggtgaaaacgtggactgaacgg
tctcctcagttcaaattcattattcaagacattcagaaggaaaaagtgtgtggaaatttg
acattgcaacatcacatgctagaaccagtccaacgcattccacgctacgagatgcttcta
aaggactacctaaggaaattgcctcaggattccctagactggaaagatgctgaaaaatcc
ctggaaattatatccactgcagcaagtcactcaaatagtgcaataagaaagatggagaat
ctaaagaagttgttggagatatatgagatgctgggagaagaggaagacattgtgaaccct
tcaaatgagctgataaaagaaggacagatccttaaactggctgctcgcaacacatctgcc
caagagcgctatcttttcctgtttaacaatatgttgctctactgcgtccccaaattcagc
ctggtaggatccaagttctcagttcgaaccagagttggcatagatggcatgaagattata
gaaacccataatgaagaatatccacacactttccaagtgtctggaaaagagaggacactg
gagttgcaggccagttctgaacaggataaagaagaatggataaaggcacttcagagtact
attgaagcttttcagcagaggaatgaaactttcagaaatgctattgctaaagaatatgaa
gacatgcctgttgaagtctctaacgctgagcttgggaagagagcgccgaggtggatccgg
gacaacgaggtcaccatgtgcatgaagtgcaaggagcccttcaatgcactgacgaggagg
aggcaccactgccgagcgtgtggacacgtggtttgctggaaatgttctgattacaaagca
catctcgaatatgatgggaataaattgaacaaagtctgcaaggattgctatcatgttata
attggttgtacagacagcgaagaaaagaagaggaagggcatcttggagattgaatctgca
gaagtctctggaaatagtgtcatatgtagctttcttcagtacatggagaagtccaagccc
tggcagaaggcatggtgtgtcatacccaaacaggaggctcttgtgctctacatgtatggt
gctccacaggatgtgaaagctctggctacaattcctcttctgggctacacagtggatgac
actccaaaaagtgctgacctcccccatagcttcaaactgacccagtccaagtctgtgcac
agttttgctgcagacaatgaggaactgaaacagaagtggctgaaagttatccatttagct
gtcaaaggtgagacgccagaatgtcaaaatgaactgcaagtgaatttagaagagcagcct
gaatcttctaaaaaatctgaatgctga
DBGET
integrated database retrieval system
