Lonchura striata (white-rumped munia): 110481196
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Entry
110481196 CDS
T05897
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04136
Autophagy - other
lsr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110481196 (ATG2B)
04136 Autophagy - other
110481196 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110481196 (ATG2B)
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110481196 (ATG2B)
Membrane trafficking [BR:
lsr04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
110481196 (ATG2B)
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110481196 (ATG2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
110481196
NCBI-ProteinID:
XP_021405377
UniProt:
A0A218V3U8
LinkDB
All DBs
Position
5:14070843..14116044
Genome browser
AA seq
2078 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLTQVPLDKWCLNEIL
ESADAPLEVTDGFIQSISLSVPWGSLLQDNCALEVKGLEMVFRPRPRLASGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEGSQPFEGLEKFAETIETVLRRVKVTFLDTVLRIEHVPE
NSKSGTALEIRVERTMYCDETADECSGINVHQPTAFAHKLLQLSGVSFFWDEFPASAKSS
PVCSATQLATEPKLSPSWNPKIIYEPHPQLTRNLPEITPSDPVQICKLIGRMELSLTLKQ
NEVLPGAKLDIDGQIDSVHLFLSPRQVHLLLDMVAAIAGPESLSRIELSNKDRKNRPMQQ
EDEYRIQMELKRYLRKESLSAGASSEQSFYETESARTPSSREEEVFFSMAEMDMSHSLSS
LPPLGDPPTMDLDLSLTSTYTTTPAGSPLSTTVLQPTWGDFLDRNKQELQPPRGSSLTAN
MVHQTSIRRTSIPSRSVSVDESRPELLFRLAVGTFSVSVLHIDPLPPPESSLNLNPLTPM
ARDFFARIEKIEPVKFSTEDFLSFREVFAEACSHDHLRFIGTGIKVSYEQRQRTASRSFS
TDLSIGEMEFLECLFSTDSHSMQPHYTELLTFHSEERNDSHSMPCLQLHYKHLDNRGPQG
SQGRLSSVPQKAELQIKLSPVFCELDISIVDRLNSLLQPQKLTTVEMMASHMYASYNKHL
SLHKAFTEVFLDDSRTPANCRVSVQVTAPALKLSVRFPIPDLRSDQERGPWFKKSLQKEI
LHLEFTDVEFKTEFIGGSTPEQVKLELTFKELTGSFEEDNAEMPVKFFQVSGGTDGDVTS
SSDNFDWPRIVLKINPLAVHSILERIAAEEEEGDNNFQEEEEGGSHSLKDVCDIRRPEPS
PFSSRRVMFENEEMVMPGDVVEMTEFQDKTINNSHYVLELMLPNIHLTLPNKSFYEKLYN
RISNDLLLWEPTAPSPVETFENLSYGVGLSVASQLINTFSKDSFSQFKSAVHYDDESGSE
EETLQYYSTVDPNYRSRRRKKFDSQNKNSQSFLSVLLNVTHGLVSVFTDVKQDDGSTVEG
KYGEFWLEFNGGSLFSVTKYEGFEDRHYVCLHSSSLNLYHQGLVDGVVPSSEVRLPSIIR
PHWLEPTICFSEEDGLSKTTSDGVGVDSPSMLTVAVKIQSDKIESNTKEFLVAVGLRGAT
LQHRVLPSGLSWHEQILYFLNISDEPVLGYSPPATITTFHVHLWSCALDYRPLFLPVRSL
LTVETFSISSSVAVDKSSSTLRIILDEAALHLSDKCNTVMVNLHRDYVRVMDMGLLELTI
TTVKSDSEGERTKPRFELHCSSDVIHIRTCSDSCAALMNLIQYIASYGDLHPPAKTEVKR
GVSKPKMKVETFSQPSSHGPGLAESEQQILRDLMSDAMEEIETQQTASAIKQESNGVLDD
KSQTQEPSCSDLFLFPDESGNVSQEPSPTYASFTHHLISEAMGDVPAESDDFCILFAPKV
AVAEKEEEPVIKIMVDDAIIIKENHFSQPIKKTDTSKAPLHFPVPLVRYVVKEISLIWHL
YGGRDFGTAPPTSPAKSFISPHSSPSHTPTRHGRNTACGGRGRNPDFLMEIQLSKVKFQH
EVYPPGGAEGESCLLEQPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSNM
LTVKALHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSTEVELLVTPDPE
VKKSPGAEVTCSLPRHVSSLKEPSPVISFASHKQVNENGGIDSMDVVNGDDGHFSQETTS
YSDQPVFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLCYRHG
LLGVDKLFSYAISEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGR
IVRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGPTFIEAKKIKRFPRH
RLAPQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHENRGVTGAVGGVLRQIPPTVV
KPFIVATEATSNVLGGMRNQIRPDVRQEESQKWRLGED
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggcctttctcggagtccatcaagaagagagcctgcaggtacctgctgcagagg
tacctgggccacttcttgcaggagaagctcagcctggaacagctcagcctggatctctac
cagggcaccggctccttgacgcaggtccctctggataagtggtgtcttaatgagatcctg
gagtctgctgatgcacctctggaagtcacagatggatttatccaatcaatttctttatct
gttccatgggggtcattgctgcaggataactgtgcattagaagtaaaaggattagagatg
gtcttcaggccaagaccaaggcttgcatctggttctgagcctatgtattggtcaagtttt
atgaccagtagtatgcagcttgcaaaagagtgtcttagccaaaaattgacagatgaacaa
ggagaagggtcccagccttttgaaggacttgagaaatttgcagaaactattgaaacagtt
ctaagaagagtgaaagttacctttttggatactgtgttacgaatagaacatgtgccggaa
aactctaaaagtggaactgcacttgaaatcagagttgaaagaactatgtactgtgatgaa
actgcagatgaatgctctggaattaatgtacatcagcccacagcttttgctcacaaatta
ctgcagctctcaggtgtctctttcttctgggatgagtttcctgcatcagcaaagtcctcc
ccagtgtgttcagctacacagctggcaactgaaccaaagctttcacctagctggaatcca
aaaataatttatgagccacatccacaattaacaagaaacttgccagaaattactccttct
gaccctgtacagatctgtaagctgattggtagaatggaattgagcctaacattaaaacaa
aatgaagtacttcctggagctaagttggatatagatggacaaatagattctgtacatctg
tttctgtcaccaaggcaggttcatcttctattggacatggtagcagctattgctggacca
gagagtctgagcaggatagaattgtcaaataaagacaggaagaaccggccaatgcaacag
gaggacgagtatcggattcagatggagttgaagcgttatttaaggaaagagtctttatct
gcaggagcatcctctgagcaaagcttctatgagacagagagtgccagaacaccttctagt
cgtgaggaagaagttttcttctcaatggctgaaatggacatgtcccacagcctttcttcc
cttccacctcttggagatcctccaaccatggatctagacttgtctttaaccagtacatac
acaactacaccagcaggatctccactgagcactacagtgctgcaaccgacttggggtgat
tttcttgatcgtaacaaacaagaattacagcctccaagaggttcctcactaacagccaat
atggttcaccagacttccataagaaggacatctattccatccagatctgtttctgtggat
gaatccagacctgagctactttttagactggcagttggaactttctcagtgtctgtactt
catattgaccctttacccccacctgaaagttcactgaaccttaacccattgacaccaatg
gctcgggatttctttgcccgaatagaaaagattgagccagttaagttttcaacagaagat
tttctgtccttccgagaagtatttgcagaagcttgttctcatgatcaccttaggtttata
ggtactggcatcaaagtgtcttacgagcaaagacaaaggactgcctcgcgaagttttagt
actgacttatccattggcgagatggagttcctggaatgccttttttctactgactctcat
tccatgcagcctcactatacagagctgctgacatttcattctgaagaaagaaatgattct
cattctatgccatgccttcagctgcattataagcatttagataatagaggacctcagggt
agtcaagggagactcagttctgttccacagaaagcagagttacaaataaagttaagtcca
gtgttttgtgagctggatattagtattgtagacagattaaattctttacttcaaccccag
aaactaactacagtggagatgatggcatctcacatgtatgcttcttacaataagcactta
agtctgcataaagcatttactgaagtttttctggatgattcacgtactcctgcaaactgt
agagtttcagttcaagtgactgccccagcattaaaactctctgttcgcttcccaatacct
gatctacggtcagatcaggaaagaggaccatggtttaaaaaatcacttcagaaggagatt
cttcatctcgaatttacagatgtggaatttaaaactgaatttataggagggtcgactcca
gaacaagttaaattagagcttacctttaaagagctaactggttcatttgaagaagataat
gcagaaatgccagtaaaattttttcaggtatcgggtggcacagatggagatgtaacatca
tcatcagacaattttgactggcctcggattgtattgaaaataaaccctctggctgtgcac
tctattctggaaaggatagcagctgaggaggaagaaggtgataataactttcaagaggaa
gaagaaggagggtctcattctttgaaggatgtctgtgatattagaagaccagagccttct
ccattttcctctcgtagggtcatgtttgaaaatgaagagatggtgatgccaggagatgtc
gttgaaatgactgagtttcaggataaaacaattaataattctcattatgtactggaactc
atgttaccaaacattcacttaacactaccaaacaaaagcttttatgaaaaactttacaac
aggatcagcaatgatttattgttgtgggaacccacagctccatctcctgtagaaactttt
gaaaacctttcttatggtgttggactatctgtggccagccagctcatcaacactttcagt
aaagacagctttagtcaatttaaatctgcagttcattatgatgatgaaagtggatctgag
gaagaaacactacagtattattccactgttgatccaaactatcgttcacgcagaaggaaa
aagtttgactcacagaataagaactcacaaagctttctgtctgttctgctaaatgtgaca
catggattagtgtcagtattcacagatgtaaagcaggatgatggaagtacagtggaggga
aaatatggtgaattttggcttgagttcaatggtggttcccttttcagtgtgactaaatat
gaaggctttgaggacagacattatgtttgtctccattctagcagcctcaatttgtatcat
caaggtttggtagatggagttgtcccttcctctgaagtgcgactgcccagcataatacgt
ccccattggttagagcctactatttgtttttctgaagaggatggtcttagtaagactact
tcagatggtgtaggagtggatagtccaagtatgctgactgttgcagtcaaaatccaatca
gataaaatagagagcaatacaaaggaatttctggttgctgttggactacgaggagccacc
cttcagcaccgtgtgttgccttcaggtttaagctggcatgagcagattttatattttttg
aatatttctgatgagcctgttctgggatatagtcctccagctacaattacaacttttcat
gtacatctgtggagttgtgctcttgattacaggcccttgtttttgccagtgagatctcta
cttactgttgaaacattcagcatttccagcagtgttgcagtagataaatcctcttctact
ctcaggataattttagatgaggctgctttgcatttgtctgacaagtgcaacactgtcatg
gtgaacctccatagagattatgttcgtgttatggatatgggactgttggagctaaccatt
actacagtaaaatctgattctgagggagaaagaactaaaccacgttttgagctgcactgt
tccagtgatgtaatccatattcgtacctgctctgattcatgtgctgcactaatgaatctc
atacaatatattgcaagttatggtgatttacatccacctgctaagacagaggttaaacgt
ggagttagcaagccaaaaatgaaggtggagacctttagtcagccatcttcccacggacca
ggccttgctgaatcagagcagcagattttacgggatttgatgagtgatgccatggaagaa
attgagactcagcagactgcttctgccatcaagcaagagtctaatggagttttagatgac
aaatctcaaactcaggaaccatcttgctcagatctcttcctgtttccagatgaaagtgga
aatgtctcacaagagccaagtcccacttatgcttcatttactcatcacctgataagtgag
gccatgggagatgttccagctgaaagtgatgacttctgcattcttttcgctcctaaagtt
gctgttgctgaaaaagaggaagaaccagttataaaaataatggttgatgatgcaattatc
ataaaggaaaatcatttcagtcaacctattaaaaaaacagatacaagcaaagctccgctt
cattttcctgttcctctggtacgctatgttgtaaaggaaatatctcttatttggcatctt
tatggtggaagggattttgggactgcaccaccaacctctccagctaaaagtttcataagt
cctcatagttctccttctcatacaccaacaaggcatggacggaatacagcatgtggagga
agaggaagaaacccagacttccttatggaaatacaattaagcaaggtgaaattccagcat
gaggtgtatcctccaggtggtgcagaaggtgaatcctgtctgttggagcagccagtgtca
cgacaagtttttattgttcaagatctggaaatcagagatcgcctagctacatcacaaatg
aataaatttctctatctctactgcagtaaggagatgcccagaaaagcacattcaaacatg
ttaacagttaaagctttacatgtccgtccagagtctggcagatctccacaggaatgttgt
ttacgtgtttcactaatgccacttcgcctcaatattgaccaggatgccttgtttttcctg
aaggactttttcactagcctttctacagaagtagaactcttagttactcccgatcctgaa
gttaaaaagtctcctggtgctgaagttacttgtagtttgcccaggcatgtcagcagcctt
aaggaaccaagtccagtcatttcttttgcatcacacaagcaagtgaatgaaaatggtggc
attgattccatggatgtggttaatggagatgatggtcatttttcgcaagaaacaacatca
tacagtgatcagccagtatttttcagagaatttcgctttacatcagaagttccaatacgg
cttgattaccatggcaagcatgtttcaatggatcagggaacattagctgggattcttatt
gggcttgctcagttgaactgctcagagttaaagctgaagaggctttgttatagacacgga
ttattaggtgtggataaattgttctcctatgccatcagtgaatggcttaatgatataaag
aaaaaccagctaccaggaattttgggaggagtagggcctatgcattcccttgtgcagtta
gtgcaaggtctgaaagacctggtgtggttgccaatagagcagtaccgcaaggacggacgt
attgtcagaggctttcaaagaggagcagcttcttttggtacttccactgcgatggcagca
ctggagctgacaaacagaatggttcagactatacaggcagctgcagaaactgcttatgac
atggtatcaccagggcctaccttcattgaagcaaaaaagatcaaacggttcccccgccat
cgcctggctcctcagccggtcgacctgcgggagggtgtagccaaggcctacagtgttgtg
aaagaggggattacggacacagcccaaaccatctatgagactgctgctcgtgagcatgag
aacagaggagtcactggagcggtgggaggagtcctccgccaaatcccaccaactgtggtg
aaacctttcattgttgcaacagaggcaacctcaaatgttctgggtggaatgagaaaccag
atcaggccagatgtgcgtcaagaagaatctcagaagtggcgccttggggaggactga
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integrated database retrieval system
