Lonchura striata (white-rumped munia): 110481317
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Entry
110481317 CDS
T05897
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03440
Homologous recombination
lsr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110481317 (TOP3B)
03460 Fanconi anemia pathway
110481317 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsr03032
]
110481317 (TOP3B)
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110481317 (TOP3B)
Enzymes [BR:
lsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
110481317 (TOP3B)
DNA replication proteins [BR:
lsr03032
]
Eukaryotic type
DNA Topoisomerases
110481317 (TOP3B)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
110481317 (TOP3B)
FA (Fanconi anemia) pathway
110481317 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
110481317
NCBI-ProteinID:
XP_021405536
UniProt:
A0A218V2Q7
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Position
15:6177887..6189042
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AA seq
862 aa
AA seq
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MRTVLMVAEKPSLAQSIAKILSRGNMSSRKGLNGACSVHEYTGSFIGQSAHFKMTSVCGH
VMTLDFIGKYNSWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDCIVLWLDCDK
EGENICFEVLDAVLPVMNKPRGTERTIYRAKFSSITDTDICNAMNHLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNPEKESSLTLDWDRVRVFDREVAQMFLNITKMAKEAKVESVSKKEKVKQRPLA
LNTVEMLRVASAALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGCLRQQANN
PYWAETVKVLLSEGINRPRKGHDAGDHPPITPMRAATEAELGGDGWRLYEYITRHFIATV
SADCKYLQTTISFSIGPERFTCVGKVVTSPGFTEIMPWHSIPLEESLPHCEKGDLFPIGE
IKLLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVETGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIALGKANYHQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDDTYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDSTSGPKWKMACNKCNVVVHFFENAHKVRVSPETCDLCEAALVD
VDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAAMRHPMHRGGQGKRQGRGRGKGRR
PGGRLNPKKPKDKMAALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccgtgctgatggtggcggagaagccgtcgctggcgcagtccatcgccaagatc
ctctccagagggaacatgtcctctcgcaagggactcaacggtgcgtgctctgtgcacgag
tacaccgggtccttcataggacagagcgcccacttcaagatgacatcggtgtgtggtcac
gtcatgactttggatttcataggaaaatataacagctgggacaaagtggatccagcagaa
ctttttagtaaagctcccacagaaaagaaagaagctaatcccaaactgaccatggtgaaa
tttttacaggtggagggaagaggctgtgattgtattgtcttgtggttggattgtgataag
gaaggagaaaacatctgttttgaagttcttgatgctgttcttcctgtcatgaacaagcct
cgtggcacggagaggacgatttacagagctaaattcagctccatcaccgacacagacatc
tgcaatgccatgaatcacttgggagagcccaatcgcaacgaagctctgtccgtggatgct
cgccaggagctggatctgaggattggctgtgccttcacaaggttccagactaaatatttt
caggggaaatatgggaatttagacagctccctcatctcctttgggccatgtcagacccca
acacttggattctgtgttgagaggcatgacaaaatccagtcatttaagcctgagacttac
tgggtgttgcaagctaaagtgaaccctgaaaaagaaagttctctcactttggattgggat
agagtgagggtgtttgatcgtgaggttgctcaaatgttcctgaatataacaaagatggca
aaggaagcaaaggtagaatctgtgagtaaaaaagagaaggtgaagcagagaccactggct
ctgaatacagtagaaatgctccgagtggccagtgctgctttaggaatgggtccccaacat
gccatgcaaatagcagagcgtctttacactcagggttatatcagctaccctcgaacagaa
actacccattatccagaaaactttgacctgaaaggatgtttgagacagcaagccaataac
ccttactgggcagaaactgtaaaagtattgctatcagaaggcatcaatcgtccaaggaaa
ggccatgatgcaggagaccatcctcccatcacaccaatgagagctgcaacagaagcagaa
ttaggtggagatgggtggcgactgtacgagtacataactcggcacttcattgccactgtc
agtgctgactgcaagtacctacaaaccaccatttccttcagtattggccctgaaagattt
acctgtgttgggaaggtggtaacttcaccagggttcacagaaattatgccatggcacagc
atcccattagaagagagccttccccactgtgagaaaggagatctttttccgattggtgaa
ataaagttgctggaaaagcaaaccagccctcctgattacctgacagaagcagaattgatc
actctgatggaaaaacatggcattggaactgatgccagtattccagtccacattaacaac
atttgccagcgaaactatgtcacagtggagactggtcgaagactaaagcctacaaacctt
ggcattgttctggttcatggttattacaaaatagatgcagaattggttcttcctacaatc
cgcagtgctgtagagaagcagctcaacttaatagctctgggtaaagcaaattatcatcag
gtcctggagcatacccttgacatttttaaaaggaaatttcactattttgtggattctatt
gcaggtatggatgaactgatggaagtgtctttttcacccttggctgccacaggcaaaccc
ctttcccgctgtggtaaatgccatcgtttcatgaagtatattcaggccaagccgagccgc
ctgcactgctctcactgtgatgacacctacagtctcccccagaatggtaccattaaactc
tacaaggagttgcgttgtcccctggatgactttgagctggtgctgtggtcatctggatcc
aggggaaagagctatccattgtgtccatactgttacaatcatcctcccttcagggacatg
aaaaaaggaatgggctgtaatgagtgcacccaccccacgtgccagcattcccttagcatg
cttggaattgggcagtgcgtggagtgtgagaacggggttctggtgctggactccacatcg
ggccccaagtggaagatggcctgcaacaaatgcaacgtggtcgtgcacttcttcgagaac
gcccacaaggtccgggtgtcgcccgagacgtgcgacttgtgtgaggcggcgctcgtggac
gtggattttaacaaagccaaatctcccttacctggtgatgagacccagcattcaggctgt
gtgttctgtgaccccgtgtttcaggatctggtggagctgaaacacgcagccatgaggcac
cccatgcaccgtgggggacaagggaagaggcaagggcggggaaggggcaaaggccggaga
cctggaggaagactcaacccaaagaaacccaaggacaaaatggcagctctggctgcttac
tttgtataa
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