Lonchura striata (white-rumped munia): 110481374
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Entry
110481374 CDS
T05897
Symbol
PPIL2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110481374 (PPIL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsr03041
]
110481374 (PPIL2)
03110 Chaperones and folding catalysts [BR:
lsr03110
]
110481374 (PPIL2)
04121 Ubiquitin system [BR:
lsr04121
]
110481374 (PPIL2)
Enzymes [BR:
lsr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
110481374 (PPIL2)
Spliceosome [BR:
lsr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110481374 (PPIL2)
Complex C
U4/U6.U5 tri-SnRNP related factors
110481374 (PPIL2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
110481374 (PPIL2)
Chaperones and folding catalysts [BR:
lsr03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
110481374 (PPIL2)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
U-box type E3
110481374 (PPIL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
V-set_CD47
SUB1_ProdP9
Motif
Other DBs
NCBI-GeneID:
110481374
NCBI-ProteinID:
XP_021405640
UniProt:
A0A218V2H3
LinkDB
All DBs
Position
15:complement(6326988..6394829)
Genome browser
AA seq
521 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTQFYGGKKADLPRTNFRRLSFDHCSLSLQPFEYPVCTPDGTV
FDILSIVPWIKKYGTNPITGEKLDAKSLIKLNFAKNSEGKYHCPVLFTVFTNNSHIVAIK
TTGNVFAYEAVEQLNIKPKSYKDLLTDEPFTRQDIVTLQDPTNLDKFNVSNFFHVKNNIK
VIDPDEEKAKLDPSYYLKNTNTETRETLLELYKEFKGDDILAATMKAPEKKKVDKLNAAH
YSTGAVSASFTSTAMVPETTHEAAAIEEDVVRYQYVKKKGYVRLHTNKGDLNLELHCDMT
PRTCENFIKLCKKKYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFKPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTVFGRVVGGFETLTAMENVESDPKTD
RPKEEIRIETTTVFVDPYEEADAQVTAEREKLQQEEEAAKIKAEVVPPKKEVQTPKTYRQ
GIGKYINMAAAKRSMEDDGPSTSTAVKKEKKSTGFGDFSSW
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcggcagcaccagaaggacaaaatgtacatcacgtgcgccgagtacacgcag
ttctacggcggcaagaaagcagaccttccacgaaccaattttagacgtttatcatttgac
cactgcagtttgtctctgcagccatttgaatacccagtttgcacaccagatgggacagtc
tttgacatcctgagcattgtaccttggataaagaaatatggaaccaatccaatcacagga
gaaaaactagatgccaaatcacttataaagctgaattttgctaaaaatagtgaaggcaag
taccactgtccagtgctgtttactgtatttaccaataactcccatattgtggccatcaag
actactggaaatgtgtttgcctatgaggcagttgagcagctgaacataaaaccaaagagc
tacaaggatctcctgacagatgagcccttcactcggcaagacatcgtcacactgcaggat
ccaacaaacctggataagttcaatgtctcaaacttctttcatgttaaaaacaacataaaa
gtaattgatccagatgaagaaaaagcaaaattagatccatcttactatttgaaaaataca
aatacagagacccgagaaactttactggagctttataaggaattcaaaggtgatgacatt
ttagcagctactatgaaggctcctgaaaagaagaaggtggataaactgaatgcagctcac
tattccactggagctgtaagtgcttccttcacctccactgcaatggtgcctgaaactacc
cacgaagcagctgctattgaagaagatgttgtgagatatcaatatgtgaagaagaaggga
tatgtgcgacttcacactaataaaggagacctgaatttggagctgcactgtgacatgaca
ccccgaacatgtgaaaactttatcaaattgtgcaagaagaaatattatgatggaacaatt
tttcacagatcaattcggaattttgtgatccaaggaggtgatcccactggaacaggaaca
ggaggagaatcttactggggaaaaccttttaaagatgaattcaagccaaatttgtcccac
acaggacgtggtgttcttagtatggcaaattcaggacccaacacaaacaaatcacagttc
ttcatcacattccgctcttgtgcatatctggacaagaagcacacagtttttggaagggtg
gttggtggctttgaaactctgactgctatggagaatgtggaaagtgacccaaaaacagac
cgtcccaaggaggaaataagaattgagacaacaacagtttttgttgatccctatgaagag
gcagatgcacaggtcactgctgaaagagagaagctccagcaggaagaagaagcagccaaa
ataaaggctgaagtggtcccaccaaagaaagaggttcagactcctaaaacttatcggcag
gggattggaaaatacatcaacatggctgcagcgaagcgcagcatggaggatgatgggcct
tcaacgagcacagctgtgaagaaagagaagaagagcacaggcttcggggacttcagctcc
tggtag
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