Lonchura striata (white-rumped munia): 110481376
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Entry
110481376 CDS
T05897
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110481376 (RAI1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110481376 (RAI1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
110481376
NCBI-ProteinID:
XP_021405656
UniProt:
A0A218UWQ3
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All DBs
Position
14:11453860..11461547
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AA seq
1908 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYAG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYTVQENSPYPARYSGDESLQAWGGQPQALPG
GVAKYEDNLMKKTVALAGGRPYHEPAATSLPFRTHFQQQPQQQQQQQQQQQQQPPALPYP
KLQRQKLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSGQPP
LERPLGSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPQPPQPPQPPQPPQP
MQGRHHASETLHYQNLAKYQHYNQPGQTYCQGDAPPVRTPEQYYQTFSPSASHSPARSVG
RSPSYSSTPSPLMPNLENFQYSQQPLSAGAFPAGIADHSHFMPLLNPSPTDGTSPDTQSG
NCKNLQKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGIKTPARTP
EQLKGQHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDADYLSGSEDQLERSFLYCNQ
NRSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHATLPLETFTKYVSNERDCP
RLLLSALSQEELASEIIVLQDAISEKADKAWANLPMLGKETTKSPFQMENHRPSLDSMVK
GAWPSQGDSSTLTEPLKLDKASGASTGKDFSEEVYEGPQVEFPTTESKDVLKDAAPLAFN
SKPSIPAATSSAGATSYSCYSNTTANSVASENAMEHFEWPEESLGEACLRWKDLQATDLP
KGLFPSKLVSSCKEKKNACGLDLCDGEQPAKSEPVQDFGQQVMEEEEETLTYDEATKADS
ERWLQDTRHCCSAGDFSEIPIISSPDLKESDLEAEEYSSLCELAGSEQKSVTYDASPPKP
PEMPAVLSSSEVPVSAEETVSTVEKESSASTPRLSGQSVILLGPAVGTETKVKSWFKSSL
PHIQPEEENGGGETSHLEAADAESTSSVMVKQQLTPENVLRKMEPVSRGKSLRNKRVHCR
LPEGDGPGSTVLSPFDELSAASLGPDGQTEAPSKSTQSQTPRFPAEGLPARMCTRSFTAL
AEPRAPAPLEGLKAPTHQEKLGKKPGCGVKQRVAFKTRKRNSRPAPRVVQNASDATLLVP
GLVVAEEVAGPTPLEGDAVEAGERDQRSMILRSRTKTQEVFYTKRQRGKRAADVRLKNCK
APKKLISNNHLPPAFKLPAPGSPHKEGKVGARMKLPKAGPGVGGKMSERPLHSLKRKSTF
ISPIPTKKRNLVLRSNSGGVKEEKPEGPPSLFKKMPVAKKVKAKLPTKSSGEAILKPPLP
KEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFTCKPAATAVA
ATVAAYGSSLSPAGAERVVKHSGLAVAVGEARLPRLGAAQKVPTMPVAEPLCRNPNGRAP
KGKPGGGKKLPHDGCQGEACGSTPGTQSSPNMVAKNMGLLPKKRNRKGKAAALGMAKAPL
SPALAPPLPRERVAGPGGAEEAPREKKPKTEEKEAGSSDGPAEGRSAAGPARGPKPRANH
SNYNGYSKRQRKRLGHGKAKAVPARCKSRGKRRRQPQQAPLLHPAEPEIRLKYISCKRLR
ADSRAPPFAPYVRVERRGDFTTACTVVNSPGDEARLQRGPAGPAPRPRAALPASSTMHMG
PVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKARAEGPGEDSA
VPERAPRGPEGGCGKAARPEAAAEAAKQSSLRSSPRGMFRRLQSCYCCDERTEGEEAAEK
PRRHECHKGESPPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGLQEAVKAAADLKCSS
CQQAGATVGCCQKGCPHTYHYACAIDTGCLLTEESFSLRCPKHKRQPV
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcagctgccgtacgcgggc
tatgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcggggcagcag
ctgcagggcaggccggccttttccaattacactgtgcaggagaacagcccttatccggcc
cgctattccggggacgagagcctgcaggcgtggggtggccagccacaggcactgcccggc
ggcgtggccaagtatgaggacaacctgatgaagaagacagtggcgttggcgggtgggcgg
ccgtaccatgagccggcggccacctcgctgcccttccggactcacttccagcagcagccg
cagcagcagcagcagcagcaacagcagcagcagcagcagccgcccgcgctcccctacccc
aagctgcagcggcagaaactgcccaacgatgtctcctcacccatgcccttctcacagagc
cctcacttcgggcagcactcccagtccttccctgcctcctccacctactcctcggtgccg
gggggcagccagccggcacactcctacaagagctgcacggcgccctcggggcagccgccg
ctggagcggcccctgggtagcgctgccagcctggcccctggcccccgtgtgcccaacctg
cacggctaccaacccaaccgcattggctacgagcagcccccacagccgccgccgcagccc
ccgcagccgccaccaccacagcccccacagccaccgcagcccccgcagcccccacagccc
atgcaggggcggcatcacgcctcagagaccctccactaccaaaacctggccaagtaccaa
cattacaaccagccaggccagacctactgccagggcgatgcgccgcccgtccggacgccg
gagcagtactaccagaccttcagccccagcgccagccactcgccggctcgctccgtcggc
aggtccccgtcctacagctccactccctcccctctgatgcccaacctggagaacttccaa
tacagccagcagcccctgagtgctggtgccttcccggccggcattgctgaccacagccat
ttcatgccgctgctgaacccttctcccactgacgggacgagccccgacactcaatctggg
aactgcaaaaacttgcagaaggagaagctgcccgaaaacctgctgtcagatctgagcctg
cagagcctgacagcactcacctcccaggtggagaacatctccaacactgtccagcagctg
ctgctctccaaagcggctgtgccccagaaaaagggcatcaagaccccagcaaggacccct
gagcagctcaaggggcagcactgcagtcctgagagcagcacctactcggcagagcaggtg
gggacccccctgtccgacccgctgagcaccccccagtctgtccatgctgaaacacaggac
gctgactatctcagtgggtcagaggaccagctggagaggagtttcctgtactgcaaccag
aaccgcagccctgcacgagtcaacagcaactccaaggcaaagcctgagtcagtgtccacc
tgctctgtgacctccccagacgacatgtccaccaaatcagatgactctttccagagcatc
cacgccaccctgcccctggagaccttcaccaagtatgtgagcaatgaacgggactgccct
cgactgctcctcagcgccctgtcccaggaggagctggcttctgagatcatcgtcctgcag
gatgccatcagtgagaaggcagacaaagcctgggccaacttgcccatgctgggcaaggag
accaccaagtcccccttccagatggagaaccaccggcccagcctggactccatggtgaaa
ggtgcctggcccagccagggtgactccagcacgctcaccgagcccctcaagctggacaaa
gcttcaggggccagcacagggaaggactttagtgaggaggtgtacgagggtcctcaggtg
gagtttccaaccaccgaaagcaaggatgtgctgaaggacgctgccccactggccttcaac
tccaagcccagcatcccagcagcgacttcaagcgcgggagccaccagctacagctgctac
tcaaataccaccgccaactcggtggcgtctgagaatgccatggagcattttgagtggccg
gaggagagcctgggtgaggcctgcctgcggtggaaggatctccaggccaccgacctcccc
aagggcttgtttcccagcaaattggtgagctcctgcaaggagaaaaaaaacgcctgcggc
ttggacctgtgcgatggagagcagccagccaagagtgagccggtccaggactttggccag
caggtgatggaggaggaggaggagacactgacctatgatgaagcaacaaaggcagacagc
gaaaggtggctgcaggacacccggcactgctgctcagctggggactttagtgagatcccc
atcatctcctcgccggatctgaaggagtcagacctggaggcagaggagtactcctcactc
tgtgagctggctggctcggagcagaagtcagtgacatacgatgcctcaccaccaaagccc
ccagagatgccagctgtgctgtcctccagcgaggtgcctgtatctgccgaggagaccgtc
agcacagtggagaaggagagctcagcttccaccccacgcctctctggccagtctgttatc
ctgctgggccctgctgtgggcacggagaccaaggtgaaaagctggttcaaatcctccctg
ccccatatccagcctgaggaggagaatggcggaggggagacatcccacctggaggcggcc
gatgctgaatccacctcatcggtcatggtgaagcagcaactcacgcctgaaaatgtgctg
aggaagatggagcctgtgtcacggggcaagagcctccgcaacaagagggtccactgccgg
ctgccagagggggatggccccggcagcaccgtgctgagtccgttcgatgagctgtcagca
gccagcctggggccagacggacagacagaggcaccaagcaagagcacccagagccaaaca
ccccggtttccagccgaggggctgccagcacgcatgtgcacccgctccttcaccgccctg
gccgagccccgtgcccctgccccgctggagggactgaaggcccccacgcaccaggagaag
ctggggaagaaacccggctgtggcgtgaagcagcgagtggctttcaaaaccaggaagcgc
aacagccggccggcccccagggtggtccaaaacgccagcgatgccaccctcctggtgccc
ggcttggtggtggcggaggaggtggcagggccgacaccgctggagggggacgcggtggaa
gccggggagagggaccagcggtcgatgatcctgcgctcccgcacaaagacacaggaggtt
ttctacaccaagcggcagaggggcaagcgggcagctgatgtccggctgaagaactgcaag
gcgcccaagaagctcatatccaacaaccacctcccacctgctttcaagctgccagcacca
ggcagcccccacaaggagggcaaggtgggtgcccggatgaagctgcccaaagcagggccg
ggcgtggggggcaagatgtcagagcggccgctgcactcactgaaaagaaagtccaccttc
atctcccccatccccaccaagaagaggaacctggtcctgcggagcaacagcggtggcgtg
aaggaggagaagccagagggtccccccagcctcttcaagaagatgccggtggccaagaag
gtgaaagccaagctgcccaccaagagctctggcgaagccatcctgaagcccccgctgcca
aaggaggcccctgatgtctgcatcaagatcacctcccgggcggccttccaggaggccacc
aagaccaaagtgctgcctccccgcaagggccgcggcctcaagctggaagccatcgtccag
aagatcacctcccccaacctgaagaagttcacctgcaaaccagcagccacagcagtggca
gccacagtagctgcctatggctcctccctgagcccggctggggcggagcgggtggtgaag
cacagtgggctggctgtggcagtgggcgaagcgaggctgcccaggctgggggcagcacag
aaggtgcccacaatgccggtggctgagccgctctgccggaaccccaatggccgagcgcca
aaggggaagccgggtggtgggaagaagctgccccatgacggctgccaaggggaggcttgt
gggtcaacgccaggaacccagtccagccccaacatggtagccaaaaacatggggctcctg
cccaagaagaggaaccgcaagggcaaagcagcagcgctgggcatggccaaggcacccctg
agccccgcactggcaccaccgctgccccgggagcgcgttgccggcccgggtggcgcggag
gaggcgcctcgggagaagaaaccaaagactgaggagaaggaggcggggagcagcgacggc
cctgccgaggggcgctccgccgccgggccggcgcggggcccgaagccgcgggccaaccac
tccaactacaacggctactccaagcggcagcggaagcgcctgggccacggcaaggccaag
gcggtgccggcgcgctgcaagagccgcgggaagcggcggcggcagccccagcaggccccg
ctgctgcaccccgccgagcccgagatccgcctcaagtacatctcctgcaagcggctgcgg
gcggacagccgcgccccgcccttcgctccctacgtccgcgtggagcggcgcggagacttc
accaccgcctgcaccgtggtcaactcgcccggcgacgaggcgcggctgcagcggggaccg
gccgggccggcgccgcggccgcgggcggcgctgcccgcctcctccaccatgcacatgggg
ccggtggtgtcgaaggcgctgagcgccgcgtgcctcgtctgctgcctctgccgcaacccc
gccaactacaaggacctgggggacctgtgcgggccctactaccccgaggactgcctgccc
aagaagaaatcccggctgaaggagaaggcgcgggcggaggggccgggcgaggactcggcc
gtgcccgagcgggcgccccgcgggcccgagggcggctgcgggaaggcggcgcggccggag
gcggcggccgaggcggccaagcagagctcgctgcgctccagcccgcggggcatgttccgt
cggctgcagagctgctactgctgtgacgagaggacagagggcgaggaggcggccgaaaag
ccccggcggcacgaatgtcacaagggcgagtccccgccgcaggagccggcgggcgacacg
caggagcactggctgcacgaggcctgtgccgtatggaccgctggggttttcctggtggcg
gggaagctctatgggctgcaggaggctgtcaaggcggctgccgacctgaagtgctcgagc
tgccagcaagcaggagccaccgtgggctgctgccagaaggggtgtccccacacctaccac
tacgcgtgtgccatcgacacaggctgcttattaactgaggagagcttctctctgagatgt
cccaaacataagaggcagccggtgtag
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