Lonchura striata (white-rumped munia): 110481379 Help Entry 110481379         CDS       T05897                                  Symbol DEPDC5 Name (RefSeq) GATOR1 complex protein DEPDC5   KO K20404   SEA/GATOR complex protein SEA1/DEPDC5 Organism lsr  Lonchura striata (white-rumped munia) Pathway lsr04150   mTOR signaling pathway Brite KEGG Orthology (KO) [BR:lsr00001]  09130 Environmental Information Processing   09132 Signal transduction    04150 mTOR signaling pathway     110481379 (DEPDC5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:lsr04131]     110481379 (DEPDC5) Membrane trafficking [BR:lsr04131]  Autophagy   Other autophagy associated proteins    SEACIT/GATOR1 complex     110481379 (DEPDC5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEPDC5_CTD IML1 IML1_N DEP Motif Other DBs NCBI-GeneID:  110481379 NCBI-ProteinID:  XP_021405651 LinkDB All DBs Position 15:complement(3220426..3259465) Genome browser AA seq 1592 aa AA seqDB search MRTNKVYKLVIHKKGFGGSDDELVVNPKVFLQIKLGDVVEIAHPNDEYSPLLLQVKSLKE DLQKETISVDQTVAQVFRLRPYQDVHVNVVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS LVSTCAYVTQKVEFAGIRAQAGELWVKSEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYEAKSIDEFPETHRA SIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPSGYNST SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN GIGVDLVCMGEQPLHAVPLFKLHNRCGPGDSRMGDDYNIPHWINHSFYTSKSQLLCNSFT PRIKLAGRKPLTEKAKNNRDASLGAPKDAENALPIQVDYDGYDAQVFRLPGPARAQRCAT FRSVRERESRTRKSSSSYDVSCSPSLQSRALPPEEVRSQASDDSSLGKISNILMIPRPHL HQCEVSSSLGYTSTRDFLESTLESQQRDSSAPGRFHVGSAESLLHIRPGGYAPQRALINP FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAEMQGSGQQDLTHSSAELLE LAYHEATGRHVSSRHAGDGASFLSFSGTDEYGNGLGAGPGAGVNLKSQNKDSLEDAVSSS PDPMPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQSLQNDYTEGCYDLLPEADIDRRDEE GVQMTAQQVFEEFICQRLMQGYQIIVQSKPQKPAPAVPPPLSSSPLYSRGLVSRNRPEEE NQYWLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHSDSEFVSCWVEFS HERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACISATKRIMEGEAHCDVY GDKPRSDEEEWQLLDGFIRFVEGLNRIRRRHRSDRMIRKGSAMKGLQIAGPIPTHSLEQS GPPIGKKGTSALSALLQMEASQKTLGEQQAAMLSGKSSGQPSESGSIAITPTYMDSPRKD GAFFVDFVRSPRTASTFYSQVSIDQSVPASSDGSALLPAGQVPDRGSTQALGSTQSAAEP GYSTAGAAEGSSQQCSASALTSSSTLVEILEAMKHPTTGIQLLSEQKGLSPYCFISAEVV HWLVNNVEGVHTQAMAIDIMQKMLEEQLIVHASGEALRTFIYGFYFYKIVVDKEPDRVGL QQPAMWHTAAMDDFSAFQRKWFEVAFVAEELLHSEIPAFFLPWLPSRPASYASRHSSFSR SFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWMA VTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNVSCLLKEG SEHLFDGFEPETYWDRMHLLQEAIAHRFGFVQDKYSASAFNFPAENKPQYIHVTGTVFLQ LPYSKRKFSSGQQRRRRNSTSSTNQNMFCEERIGYNWAYNTMLTKTWRSSATGDEKFADR LLKDFTDFCWNKDSRLVTFWTDCLDKMHASAP NT seq 4779 nt NT seq  +upstreamnt  +downstreamnt atgagaaccaacaaggtgtacaagctcgtcatacataagaaggggtttggaggcagtgat gatgaactggtggtgaatcctaaagtatttcttcaaatcaagctgggagatgttgtggaa attgcacatcccaatgatgaatacagtcccctgcttctccaagtgaagtcacttaaggaa gatttgcaaaaagaaacgataagtgtggatcagacagttgcacaagtgttccgcctgcgg ccgtaccaggatgtccatgtcaatgttgttgacccaaaggaggtgaccttggacttggtg gagctgacatttaaagatcagtatattgggcgtggggatatgtggcgactgaagaagagt ttggtcagcacatgtgcatatgtcacccaaaaagttgaatttgcaggtatcagggcccag gcaggtgaactgtgggtaaagagtgagaaagtcacttgtggatacatcagtgaggacacc cgggtggtcttccgctccacatctgccatggtttatatttttatccagatgagctgtgaa atgtgggattttgatatttatggggatctatactttgagaaagctgtgaatggtttcctt gctgacctcttcacaaaatggaaggagaagaattgcagccatgaagtgacagtggttcta ttttcaagaacattttatgaagcaaaatctatagatgaatttcctgaaacacatcgtgca tcaattcggcaggatcatgagggaagattttatgaagatttttacaaagtcgtagttcag aacgagaggcgggaagagtggacctccttgcttgtaaccattaaaaagcttttcatccag tatcctgtgctggtacgactcgagcaagcagagggctttccttcaggttacaattctacc tcagcacaagggaactacctggaggctataaatctttcattcaatgtgtttgacaagcac tacatcaaccgcaacttcgaccgcacggggcagatgtcggtggtgatcacccccggcgtg ggcgtgttcgaggtggaccggctcctcatgatcctgaccaagcagcgcatgattgacaac gggataggtgtggatttggtgtgtatgggagagcaacccttgcatgctgtaccactcttt aagctccataatcgctgtggccctggtgactcacgaatgggtgatgactacaatatccca cactggataaatcatagtttctacacatccaaaagccaactcctgtgtaacagcttcact ccacggatcaagctggcaggaaggaagccactgacagagaaagcaaaaaataatcgtgat gcctcattaggagctccaaaggatgctgagaatgccttgcctatccaggtagattatgat ggctatgatgcccaggtgttcagactgccaggcccagccagagcccagcgctgtgccact ttcaggtcagtgagggagagggaaagccgcacgaggaagagctccagctcctacgacgtc tcgtgcagcccctccctgcagagccgcgcgctgcccccggaagaggtcaggagccaggct tctgatgacagctctctgggcaagatctccaacatcctgatgatcccgcggcctcacctg caccagtgtgaagtcagcagctccttgggctataccagcaccagagatttccttgagagc acgctggagtcgcagcagcgcgactccagcgctccggggcggttccacgtgggcagcgcc gagtcgctgctgcacatccgcccggggggttacgcgccccagcgcgccctcatcaacccc ttcgccccgtcccgcatgcccatgaagctgacgtcgaaccgccggcgctggatgcacacc ttccccgtgggtccctcaggagaagctatccagatccatcatcaaacccgccagaatatg gcagaaatgcagggcagtgggcagcaggatttgacacattcctctgcggagctgctggag ctggcttaccatgaggcaactggcagacacgtcagctctcggcatgcaggggacggcgcc tccttcctgagcttcagcgggacggacgagtacgggaacgggctgggggccggcccgggc gcaggggtgaacctcaaatctcaaaacaaggattccttggaagatgctgtctctagttct ccagatccaatgccaggcttctgttgtacagttggagtggactggaaatccctgaccacc ccggcctgcctccctctcaccacggattacttccccgaccgccagagcctgcagaacgat tacaccgagggctgctacgacctgctgccagaggctgacattgacaggagggatgaggaa ggagtgcagatgacagcccagcaggtgtttgaggagtttatttgtcagcgtctcatgcaa ggctatcagattattgtgcaatccaaaccgcagaagccagccccagccgtgccacccccg ctcagcagcagtcccctctacagcagaggtcttgtgtcaagaaatagacctgaggaagag aatcaatactggctgagcatgggccgtactttccacaaagtcaccttaaaagacaaaata attactgtgactcggtacctgccaaagtatccatatgaatctgctcagataaactacacc tacagcttgtgcccctcacattctgactccgaatttgtctcttgctgggtagaattttcc catgagagactagaagagtacaagtggaattacttggatcagtatatctgctctgctggt tcagaggacttcagccttatcgagtcgctgaagttctggaggacgcggttcctgctgctg cccgcctgcatcagcgccaccaagcgcatcatggagggcgaggcgcactgcgacgtgtac ggcgacaagccgcgctcggacgaggaggagtggcagctcctcgatggcttcatccgcttc gtggagggcttgaaccgcatccgccgccgccaccgctccgatcggatgatccgaaaaggg tctgccatgaaaggcttgcagattgctggtccaattcccactcactccctggagcagtct gggcctcccattgggaaaaaaggaacctcagcactgtcagctctactgcagatggaagcc agtcagaagactctgggggagcagcaagcagcaatgctttctgggaagagctctggccag ccttcagagagtgggagcattgctatcacacccacctatatggacagccctcggaaggat ggggccttctttgtggactttgttcgcagcccacgcacagcttcaaccttctactcccag gtctccattgatcagtcagttcctgcaagctcagatggcagcgccttgctccccgcgggg caggtccctgacaggggcagcacccaggccctggggagcacccagagtgctgcagagcca ggatacagcacagctggtgctgcagagggcagctcccagcagtgttcagcaagtgctctg acttcctcctccactttggtagagattcttgaagccatgaaacaccccaccacagggatc cagctgctctctgaacagaagggcctctccccctactgcttcatcagtgcagaagttgtg cactggctggtgaataatgtggaaggggtgcacacccaggccatggccattgacataatg cagaaaatgttagaagagcagcttattgtccatgcatctggagaagctttacgaaccttt atttatggcttttatttttacaagattgttgtggacaaagaaccagaccgagtggggctg cagcagcctgccatgtggcacacagctgccatggatgacttctcagccttccagaggaaa tggtttgaggtggcctttgtggcagaagagctcctgcactcggagatcccggcgttcttc ctgccctggctgcccagccgccccgcctcctatgcaagtaggcacagttcctttagccgc agtttcggaggacggagccaggcagctgcactcttagctgccacggtgcccgagcagcgg acggtgacgctggatgtggatgtgaacaaccgcacggaccggctggagtggtgcagttgt tattaccatggcaatttctccctgaacgctgcctttgaaatcaagttacactggatggca gtgactgcagctgttctttttgagatggttcaggggtggcaccggaaagccacctcctgt gggttcctgctcgtcccagtcctggaaggcccctttgctttgcccagttacttgtacggg gacccacttcgagctcagctgttcatcccactcaacgtgagctgcttgctgaaggagggg agtgagcatttgtttgatggctttgaaccagaaacatactgggaccgaatgcatcttctt caggaagcaatagctcaccgatttggatttgtacaagataaatattcagcctctgcattc aacttcccagcagaaaacaagccccagtatatccatgtcacagggacagtgtttttgcag ctgccatattccaagcggaagttttccagcgggcagcagcggcgccggcgcaactccacc agctccaccaaccagaacatgttctgtgaggagcgcattggctacaactgggcctacaac accatgctgaccaaaacctggcgctccagcgccaccggcgacgagaagtttgcagaccgg ctgctgaaagacttcacagacttctgctggaacaaagacagccggcttgtcacgttctgg actgactgtctggacaagatgcatgctagtgctccgtga

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