Lonchura striata (white-rumped munia): 110481502
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Entry
110481502 CDS
T05897
Symbol
POU2F1
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110481502 (POU2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110481502 (POU2F1)
03021 Transcription machinery [BR:
lsr03021
]
110481502 (POU2F1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
110481502 (POU2F1)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
110481502 (POU2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110481502
NCBI-ProteinID:
XP_021405839
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All DBs
Position
1:complement(99785380..99893406)
Genome browser
AA seq
784 aa
AA seq
DB search
MFSQSSSVDLIEIAILPFLGLSEPVEDTTAMLDCSDYVLDSRMNNPSETSKPSMESGDGN
TGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSNEES
GDSQQPSQPSQQPSVQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQLLAAAVQHS
ASQQHSAAGATISASAATPMTQIPLSQPIQIAQDLQHLQQLQQQNLNLQQFVLVHPTTNL
QPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLASQPATPTRTIAATPI
QPLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDF
SQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSTLSSPSALNSPGQGIEGLNRR
RKKRTSIETNIRVALEKSFLENQKPTSDEIAMIADQLNMEKEVIRVWFCNRRQKEKRINP
PSSGGTSSSPIKAIFPCPTSLVATTPSLVTSSAATTLTVNPVLPLASPAVTSLSVTGTTE
TTSNNTATVISTAPPASSAVTSPAPSPSPSASASTSEASSASETSTTQTTSAPLSSPLGT
SQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPGLMASSQFAAGGALLSLNP
GTLGGALSPALMSNSTLATIQALASGGSLPITSLDATGNLVFANAGGTPNIVTAPLFLNP
QNLSLLTSNPVSLVSAAAASAGASGPVASLHATSTSAESIQNSLLTVASASGATSTTTTA
SKAQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtcagagcagtagtgtagatttgatagaaattgccattctcccgttccttgga
ctatctgaacctgtagaggataccacagcaatgctggactgcagcgactacgttctagac
tcaagaatgaacaatccgtcagaaaccagtaaaccatcgatggagagtggggacgggaac
acaggcacgcaaacaaacggcctggactttcaaaagcagcctgtgcctgtcggaggagca
atctctacagcccaggcccaggccttccttgggcaccttcatcaggtccagctcgctgga
acaagtttacaggctgctgctcagtccttaaatgtacagtctaaatctaatgaagaatct
ggggactctcagcagccaagccagccttcccagcagccttcagtgcaggcggccataccc
cagacccagctcatgctggccggaggacagatcaccgggctcacgttgacgccagcccag
caacagttattgctccaacaggcgcaggcccagttgctggcggctgcagtgcagcactca
gccagtcagcagcacagcgctgctggtgccaccatctcggcctctgctgcgacgccgatg
acgcagatccctctatctcagccaatacagattgcacaggatttgcagcacttgcagcag
cttcagcagcagaatctcaacctgcaacagtttgtgttggtgcatccaacaaccaacttg
cagccagcacagttcatcatctcacaaacgccgcaggggcagcagggtctcctgcaagcg
cagaatctcttaacgcaactacctcagcaaagccaagccaacctcctgcagtctcagcca
agcatcacccttgcctcgcagccagcaaccccaacacgcacaatagcagcgacccccatt
cagccacttccacagagccagtcaacaccaaagcgaatcgacactcccagcttggaggag
cccagtgaccttgaggagcttgagcagtttgccaagactttcaaacaaagacggatcaaa
cttggattcactcagggtgatgttgggctcgctatgggcaaactctatggaaatgacttc
agccaaactaccatctctcgctttgaagccttgaacctcagctttaagaacatgtgcaag
ttaaagccacttctggaaaagtggctcaatgatgcagaaaacctctcatctgattcaact
ctctccagcccaagtgccctgaattctccagggcaagggatcgaaggcttgaaccgtagg
aggaagaaacgcaccagcatagagaccaacatacgtgtggccttagagaagagtttcctg
gagaaccaaaagcctacctcggatgagatcgccatgatagctgaccagctaaacatggag
aaggaggtgatccgcgtttggttctgtaaccggcgccagaaggagaaaaggatcaaccca
cccagcagtggtggaaccagcagctcgcccatcaaagcaattttcccttgtccaacctca
ctggtggcaaccacgccaagccttgtgactagcagtgcagctacaaccctgactgtcaac
cccgtgctccctctggccagtcctgctgtcaccagtctgtcagtcacaggcacaacagaa
accacctccaacaacacggcaacagtgatttcaacagcacctccagcttcttcagcagtg
acatcacccgccccgagcccttccccttctgcctcagcctccacttcagaggcctccagt
gccagtgagaccagcacaacacagacaacctccgctcccttgtcctcccctctcgggacc
agccaggtgatggtaacggcatcagggttgcaaacggcggcagcggccgcgttacaagga
gctgcacagttgcctgcaaatgcaagtcttgctgccatggctgctgcagcaggactaaac
ccaggcttgatggcatcctcgcagtttgcagctggaggtgccttactcagtctcaatcca
gggacattaggtggtgctctcagcccggccctgatgagcaacagtacactggcaactatt
caagctcttgcatccggtggctctcttccaataacatcactggatgcaactggaaacttg
gtgtttgccaatgctggaggtacccctaacatcgtcactgcccctctgttcctgaaccct
cagaacctttctctgctcaccagcaacccagttagcttggtctctgcagctgcagcctcc
gcaggggcctctggaccagtcgccagccttcacgccacctccacctcagccgagtccatc
cagaactctctcctcacagtggcctctgccagcggggccacgtccaccaccactactgcc
tccaaggcacagtga
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