Lonchura striata (white-rumped munia): 110481594
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Entry
110481594 CDS
T05897
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110481594 (SMARCAD1)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110481594 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
HDA2-3
CUE
HHH_3
Motif
Other DBs
NCBI-GeneID:
110481594
NCBI-ProteinID:
XP_021405990
LinkDB
All DBs
Position
4:20469720..20510248
Genome browser
AA seq
1043 aa
AA seq
DB search
MSLYNLDRFRFERKGKGAEQVSPSSPAACAEAPVAAAALRAAAGDEEEGADDNKRPDTPA
SDVSERTEYSTIPETPEAQRTMKESYFKRQRGVHFLDLSDSEDEEPQNVSAAKETWAPRG
EVVLNSELYDDDDQPEEEMPQLALVNGGEQQPVVKEHLEKDTRDSKLQTMKERFPQRSDQ
ELLKLIESACTMDEAVAAGLKLNDKAASSKRKERDSPTNCKTKNEQVAKKSKVSYLDDSE
PKRQWERQEMLVKKLQSTFPGLDKEELREVLEEHNWVFHDALEALKIFADDEEGMEFPPK
RNVADWTEASTKTQSEESKDKVKQKASEREQNGFQKKDKVKRSIWSAERETEHVEDESSS
EDGGSSLDEDYSSGDEVMEDSYKAKILSFLQDASLSELTLIPQCSQKKAQKIIALRPFNS
WEALFTKMTKTSGLSEDIVWNCKILLKERDVVLKLMNKCEDISNKLTKQVTRITRDGECG
WNIEQPSILNRSLKLKPYQKIGLNWLALLYKHRLNGILADEMGLGKTIQAIAFLAYLYQE
GNKGPHLIVVPASTLDNWIREVHLWCPELNVLFYYGSQEDRKHLRLDIHNKVVDFNVIVT
TYNSAMSSSDDRGLFRRLKLNYAIFDEGHMLKNMSSIRYQHLMTINAKNRLLLTGTPVQN
NLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKTAEEQSIYEKERIAHAKQIIKPFILRR
VKDEVLKQLPPKKDLIELCAMSEKQEQLYSALLNKLKKTINSNENNSNMGNAMMQLRKMA
NHPLLHRQYYTNDKLRTMSTLMLKEPTHCDANPDLIFEDMTVMTDFELHVLCKQYSHISD
FTLDMDQILDSGKFRALERILSNLKEKGDRVVLFSQFTMMLDILEVLLKHWQHRYLRLDG
KTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDR
CHRVGQTREVQVIKLISKGTIEETMLKISQQKLKLEQDMTAAESGRCLAHNDVHLSKLEL
QYVTLKKHSSSCRQAFCCLGFLY
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctacaatttggaccggttccgcttcgagaggaaggggaagggcgcggagcag
gtgtcgccgtcctcgccggcggcctgcgcggaggcacctgtggctgctgccgcgctccgt
gctgctgcaggggatgaggaggaaggtgcggatgacaacaagaggccagacactccggct
tcggacgtgtcagagagaactgagtattccaccatcccagaaactcctgaagctcagagg
acaatgaaagagtcttacttcaagcgccagcgaggggtgcacttcctcgatctctctgac
agcgaggatgaggagccacaaaacgtcagcgctgccaaagaaacctgggctccgagggga
gaggtggtcttaaactctgaattgtatgatgatgatgaccagccggaggaggaaatgccc
cagctggcacttgtaaatggtggggagcagcagccagttgtgaaggagcatttagagaag
gataccagagactcaaagctgcaaacaatgaaggaacgttttccccagagaagtgaccaa
gaattattaaaactgatagaatcagcatgcacaatggatgaagcagtagctgctggcttg
aagctcaatgacaaagctgcctctagtaaaaggaaagaaagagattctcccacaaattgc
aaaaccaaaaatgagcaagttgcaaaaaagtcaaaagttagttatctggatgactcagaa
cccaaaagacaatgggagaggcaagagatgcttgtgaagaagttgcaaagtacattccct
ggattggataaggaggaactgagagaggtacttgaggaacataactgggtgtttcatgat
gcactggaggccctgaaaatatttgcagacgacgaggagggtatggaatttcctcccaaa
aggaatgttgctgactggaccgaagcctctactaaaacccaaagtgaggagagtaaagat
aaggtgaaacagaaagcttctgagagagagcagaatggctttcagaaaaaggacaaagtc
aaaaggagcatttggagtgctgagagagaaacagaacatgtggaggatgagtcctcttct
gaagacggtggaagctccctggatgaggactacagcagcggtgacgaagtgatggaggat
agctacaaagcgaaaatcctcagcttcctgcaggatgcttccctgagtgaactgactctg
attccccagtgttctcagaaaaaggctcagaagataatagcgctccggccctttaacagc
tgggaggctctgtttactaaaatgacaaagacttctggtttgtcagaagatatagtgtgg
aactgcaagatactgctgaaggagagggatgtggttctaaagcttatgaataaatgtgaa
gatatttccaataaactgacaaaacaggtaaccaggattactagagatggagaatgtgga
tggaacatagagcagccctccattctgaatcgcagtttgaaactgaagccatatcagaag
attggtttgaactggttagcactgctgtataagcacagattgaatggcatcttggctgat
gaaatgggcttagggaaaacaattcaagctattgcatttctggcttatctttaccaagag
ggcaataaaggtccccatttgatagttgtaccagcttcaacattagataactggataaga
gaagttcatctgtggtgtcctgaactgaatgtcctcttttactatggatcccaagaagat
aggaaacatctcaggttggacattcacaataaagtagttgatttcaatgtgattgtgact
acatacaactctgcaatgagcagctcagatgatcgaggactgttccgcaggctgaagctt
aactatgcaatttttgatgaaggtcatatgctcaagaacatgagctctatccgctaccag
cacctcatgacaattaatgccaagaatcgcttgctgctaacggggactccagttcaaaat
aatctgttggaattgatgtccctcttgaattttgtcatgccccatatgttcagcagtagc
actagtgaaattcgaaggatgttctcttcaaaaacaaaaactgctgaagaacaaagcata
tatgagaaggagagaattgcacatgcaaagcagataataaagccattcatcttgagaaga
gtaaaagatgaggtccttaaacagctacctcccaaaaaagatctcattgaactgtgtgcc
atgtctgagaaacaggaacaactctactcggctcttttaaacaagctcaagaaaaccatt
aacagtaatgagaataactccaatatgggaaatgcaatgatgcaacttagaaaaatggct
aatcaccctcttttgcatcgtcagtattacacaaatgacaagctcaggacaatgtctacc
ctcatgctcaaggaacccacacattgtgatgctaaccctgaccttatcttcgaagatatg
acagtaatgacagattttgagctgcatgttctttgtaagcaatattctcacatcagtgac
ttcacgttagacatggatcagatcctggattctgggaagtttagagcattggaacgcatt
ctctccaaccttaaagagaagggtgacagagttgtgttgtttagccagttcacgatgatg
ctggacatcttggaagttttgctaaaacactggcaacatagatacctcaggctggatgga
aaaacacagatttctgagcggatacacctgatagatgagttcaatacagatatggatata
tttgtattccttctgtccaccaaagctggaggcttgggcattaatctgacctcagccaac
gttgttatccttcatgacattgactgcaacccttacaacgataagcaggctgaagaccgg
tgccacagagtggggcagacacgagaagtacaagtcataaagcttattagtaaggggact
attgaagaaaccatgctaaaaatcagccaacagaaactgaagttagaacaagatatgacc
gcagcagaatcaggtaggtgtcttgcacataatgatgtccacttaagtaaattagagctg
caatatgttactctgaaaaaacacagttcttcatgcagacaagccttttgttgtttgggg
tttttatattaa
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integrated database retrieval system
